2VYX - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE T. THERMOPHILUS DODECIN W38F MUTANT
• Keywords: DODECINS, COENZYME A, FLAVIN DIMER, FLAVOPROTEIN, HYPOTHETICAL PROTEIN, FLAVIN BINDING PROTEIN, PROTEIN BINDING PUTATIVE STORAGE PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VYX	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TTHA1431	A	68	528	0
2	Protein	TTHA1431	B	66	518	0
3	Protein	TTHA1431	C	68	535	0
4	Protein	TTHA1431	D	68	528	0
5	Protein	TTHA1431	E	68	528	0
6	Protein	TTHA1431	F	68	524	0
7	Protein	TTHA1431	G	68	528	0
8	Protein	TTHA1431	H	68	528	0
9	Protein	TTHA1431	I	68	528	0
10	Protein	TTHA1431	J	68	528	0
11	Protein	TTHA1431	K	68	535	0
12	Protein	TTHA1431	L	66	518	0
13	Ligand	TTHA1431	A	5	0	159
14	Ligand	TTHA1431	B	4	0	111
15	Ligand	TTHA1431	C	4	0	111
16	Ligand	TTHA1431	D	4	0	111
17	Ligand	TTHA1431	E	1	0	48
18	Ligand	TTHA1431	F	4	0	111
19	Ligand	TTHA1431	G	1	0	48
20	Ligand	TTHA1431	H	2	0	62
21	Ligand	TTHA1431	I	1	0	48
22	Ligand	TTHA1431	J	1	0	48
23	Ligand	TTHA1431	K	1	0	48
24	Ligand	TTHA1431	L	1	0	48
25	Water			532	0	532
total				1373	6326	1485

Proteins

Unit 1	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 2	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67
Unit 3	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 4	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 5	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 6	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 7	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 8	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 9	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 10	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 11	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67 GLU 68 THR 69
Unit 12	GLY 2 LYS 3 VAL 4 TYR 5 LYS 6 LYS 7 VAL 8 GLU 9 LEU 10 VAL 11 GLY 12 THR 13 SER 14 GLU 15 GLU 16 GLY 17 LEU 18 GLU 19 ALA 20 ALA 21 ILE 22 GLN 23 ALA 24 ALA 25 LEU 26 ALA 27 ARG 28 ALA 29 ARG 30 LYS 31 THR 32 LEU 33 ARG 34 HIS 35 LEU 36 ASP 37 PHE 38 PHE 39 GLU 40 VAL 41 LYS 42 GLU 43 ILE 44 ARG 45 GLY 46 THR 47 ILE 48 GLY 49 GLU 50 ALA 51 GLY 52 VAL 53 LYS 54 GLU 55 TYR 56 GLN 57 VAL 58 VAL 59 LEU 60 GLU 61 VAL 62 GLY 63 PHE 64 ARG 65 LEU 66 GLU 67

Ligands

Unit 13	FMN 1070 COA 1071 FMN 1072 COA 1073 CL 1074
Unit 14	FMN 1068 COA 1069 FMN 1070 CL 1071
Unit 15	FMN 1070 COA 1071 FMN 1072 CL 1073
Unit 16	FMN 1070 COA 1071 FMN 1072 CL 1073
Unit 17	COA 1070
Unit 18	FMN 1070 COA 1071 FMN 1072 NA 1073
Unit 19	COA 1070
Unit 20	FMN 1070 FMN 1071
Unit 21	COA 1070
Unit 22	COA 1070
Unit 23	COA 1070
Unit 24	COA 1068