2VYR - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF HUMAN MDM4 N-TERMINAL DOMAIN BOUND TO A SINGLE DOMAIN ANTIBODY
• Keywords: NUCLEUS, HUMAN MDM4, IMMUNE SYSTEM, ZINC-FINGER
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VYR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MDM4 PROTEIN	A	86	682	0
2	Protein	MDM4 PROTEIN	B	86	682	0
3	Protein	MDM4 PROTEIN	C	86	682	0
4	Protein	MDM4 PROTEIN	D	86	682	0
5	Protein	HUMAN SINGLE DOMAIN ANTIBODY	E	124	968	0
6	Protein	HUMAN SINGLE DOMAIN ANTIBODY	F	124	968	0
7	Protein	HUMAN SINGLE DOMAIN ANTIBODY	G	123	962	0
8	Protein	HUMAN SINGLE DOMAIN ANTIBODY	H	125	973	0
9	Protein	HUMAN SINGLE DOMAIN ANTIBODY	I	124	968	0
10	Protein	HUMAN SINGLE DOMAIN ANTIBODY	J	124	968	0
11	Protein	HUMAN SINGLE DOMAIN ANTIBODY	K	124	968	0
12	Protein	HUMAN SINGLE DOMAIN ANTIBODY	L	124	968	0
13	Ligand	MDM4 PROTEIN	A	1	0	5
14	Ligand	MDM4 PROTEIN	B	1	0	5
15	Ligand	HUMAN SINGLE DOMAIN ANTIBODY	F	1	0	5
16	Ligand	HUMAN SINGLE DOMAIN ANTIBODY	H	1	0	5
17	Water			752	0	752
total				2092	10471	772

Proteins

Unit 1	ASN 25 GLN 26 VAL 27 ARG 28 PRO 29 LYS 30 LEU 31 PRO 32 LEU 33 LEU 34 LYS 35 ILE 36 LEU 37 HIS 38 ALA 39 ALA 40 GLY 41 ALA 42 GLN 43 GLY 44 GLU 45 MET 46 PHE 47 THR 48 VAL 49 LYS 50 GLU 51 VAL 52 MET 53 HIS 54 TYR 55 LEU 56 GLY 57 GLN 58 TYR 59 ILE 60 MET 61 VAL 62 LYS 63 GLN 64 LEU 65 TYR 66 ASP 67 GLN 68 GLN 69 GLU 70 GLN 71 HIS 72 MET 73 VAL 74 TYR 75 CYS 76 GLY 77 GLY 78 ASP 79 LEU 80 LEU 81 GLY 82 GLU 83 LEU 84 LEU 85 GLY 86 ARG 87 GLN 88 SER 89 PHE 90 SER 91 VAL 92 LYS 93 ASP 94 PRO 95 SER 96 PRO 97 LEU 98 TYR 99 ASP 100 MET 101 LEU 102 ARG 103 LYS 104 ASN 105 LEU 106 VAL 107 THR 108 LEU 109 ALA 110
Unit 2	ASN 25 GLN 26 VAL 27 ARG 28 PRO 29 LYS 30 LEU 31 PRO 32 LEU 33 LEU 34 LYS 35 ILE 36 LEU 37 HIS 38 ALA 39 ALA 40 GLY 41 ALA 42 GLN 43 GLY 44 GLU 45 MET 46 PHE 47 THR 48 VAL 49 LYS 50 GLU 51 VAL 52 MET 53 HIS 54 TYR 55 LEU 56 GLY 57 GLN 58 TYR 59 ILE 60 MET 61 VAL 62 LYS 63 GLN 64 LEU 65 TYR 66 ASP 67 GLN 68 GLN 69 GLU 70 GLN 71 HIS 72 MET 73 VAL 74 TYR 75 CYS 76 GLY 77 GLY 78 ASP 79 LEU 80 LEU 81 GLY 82 GLU 83 LEU 84 LEU 85 GLY 86 ARG 87 GLN 88 SER 89 PHE 90 SER 91 VAL 92 LYS 93 ASP 94 PRO 95 SER 96 PRO 97 LEU 98 TYR 99 ASP 100 MET 101 LEU 102 ARG 103 LYS 104 ASN 105 LEU 106 VAL 107 THR 108 LEU 109 ALA 110
Unit 3	ASN 25 GLN 26 VAL 27 ARG 28 PRO 29 LYS 30 LEU 31 PRO 32 LEU 33 LEU 34 LYS 35 ILE 36 LEU 37 HIS 38 ALA 39 ALA 40 GLY 41 ALA 42 GLN 43 GLY 44 GLU 45 MET 46 PHE 47 THR 48 VAL 49 LYS 50 GLU 51 VAL 52 MET 53 HIS 54 TYR 55 LEU 56 GLY 57 GLN 58 TYR 59 ILE 60 MET 61 VAL 62 LYS 63 GLN 64 LEU 65 TYR 66 ASP 67 GLN 68 GLN 69 GLU 70 GLN 71 HIS 72 MET 73 VAL 74 TYR 75 CYS 76 GLY 77 GLY 78 ASP 79 LEU 80 LEU 81 GLY 82 GLU 83 LEU 84 LEU 85 GLY 86 ARG 87 GLN 88 SER 89 PHE 90 SER 91 VAL 92 LYS 93 ASP 94 PRO 95 SER 96 PRO 97 LEU 98 TYR 99 ASP 100 MET 101 LEU 102 ARG 103 LYS 104 ASN 105 LEU 106 VAL 107 THR 108 LEU 109 ALA 110
Unit 4	ASN 25 GLN 26 VAL 27 ARG 28 PRO 29 LYS 30 LEU 31 PRO 32 LEU 33 LEU 34 LYS 35 ILE 36 LEU 37 HIS 38 ALA 39 ALA 40 GLY 41 ALA 42 GLN 43 GLY 44 GLU 45 MET 46 PHE 47 THR 48 VAL 49 LYS 50 GLU 51 VAL 52 MET 53 HIS 54 TYR 55 LEU 56 GLY 57 GLN 58 TYR 59 ILE 60 MET 61 VAL 62 LYS 63 GLN 64 LEU 65 TYR 66 ASP 67 GLN 68 GLN 69 GLU 70 GLN 71 HIS 72 MET 73 VAL 74 TYR 75 CYS 76 GLY 77 GLY 78 ASP 79 LEU 80 LEU 81 GLY 82 GLU 83 LEU 84 LEU 85 GLY 86 ARG 87 GLN 88 SER 89 PHE 90 SER 91 VAL 92 LYS 93 ASP 94 PRO 95 SER 96 PRO 97 LEU 98 TYR 99 ASP 100 MET 101 LEU 102 ARG 103 LYS 104 ASN 105 LEU 106 VAL 107 THR 108 LEU 109 ALA 110
Unit 5	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124
Unit 6	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124
Unit 7	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123
Unit 8	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124 ALA 125
Unit 9	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124
Unit 10	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124
Unit 11	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124
Unit 12	GLU 1 VAL 2 GLN 3 LEU 4 LEU 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 GLU 30 GLU 31 TYR 32 ALA 33 MET 34 LEU 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 GLY 50 ILE 51 ASN 52 ALA 53 ARG 54 GLY 55 TYR 56 THR 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 THR 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 LYS 98 PRO 99 TRP 100 TYR 101 PRO 102 PHE 103 MET 104 ALA 105 SER 106 LYS 107 GLY 108 SER 109 GLU 110 PHE 111 ASP 112 TYR 113 TRP 114 GLY 115 GLN 116 GLY 117 THR 118 LEU 119 VAL 120 THR 121 VAL 122 SER 123 SER 124

Ligands

Unit 13	SO4 1110
Unit 14	SO4 1110
Unit 15	SO4 1125
Unit 16	SO4 1126