2VWT - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF YFAU, A METAL ION DEPENDENT CLASS II ALDOLASE FROM ESCHERICHIA COLI K12 - MG-PYRUVATE PRODUCT COMPLEX
• Keywords: LYASE, (BETA/ALPHA)8 BARREL, 2-KETO-3-DEOXY SUGAR ALDOLASE, ESCHERICHIA COLI K-12 PROTEIN YFAU, DEGRADATION OF HOMOPROTOCATECHUATE, PYRUVATE, CLASS II ALDOLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VWT	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE	A	256	1951	0
2	Protein	YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE	B	256	1951	0
3	Protein	YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE	C	256	1951	0
4	Ligand	YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE	A	3	0	12
5	Ligand	YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE	B	3	0	12
6	Ligand	YFAU, 2-KETO-3-DEOXY SUGAR ALDOLASE	C	4	0	18
7	Water			543	0	543
total				1321	5853	585

Proteins

Unit 1	MET 1 ASN 2 ALA 3 LEU 4 LEU 5 SER 6 ASN 7 PRO 8 PHE 9 LYS 10 GLU 11 ARG 12 LEU 13 ARG 14 LYS 15 GLY 16 GLU 17 VAL 18 GLN 19 ILE 20 GLY 21 LEU 22 TRP 23 LEU 24 SER 25 SER 26 THR 27 THR 28 ALA 29 TYR 30 MET 31 ALA 32 GLU 33 ILE 34 ALA 35 ALA 36 THR 37 SER 38 GLY 39 TYR 40 ASP 41 TRP 42 LEU 43 LEU 44 ILE 45 ASP 46 GLY 47 GLU 48 HIS 49 ALA 50 PRO 51 ASN 52 THR 53 ILE 54 GLN 55 ASP 56 LEU 57 TYR 58 HIS 59 GLN 60 LEU 61 GLN 62 ALA 63 VAL 64 ALA 65 PRO 66 TYR 67 ALA 68 SER 69 GLN 70 PRO 71 VAL 72 ILE 73 ARG 74 PRO 75 VAL 76 GLU 77 GLY 78 SER 79 LYS 80 PRO 81 LEU 82 ILE 83 LYS 84 GLN 85 VAL 86 LEU 87 ASP 88 ILE 89 GLY 90 ALA 91 GLN 92 THR 93 LEU 94 LEU 95 ILE 96 PRO 97 MET 98 VAL 99 ASP 100 THR 101 ALA 102 GLU 103 GLN 104 ALA 105 ARG 106 GLN 107 VAL 108 VAL 109 SER 110 ALA 111 THR 112 ARG 113 TYR 114 PRO 115 PRO 116 TYR 117 GLY 118 GLU 119 ARG 120 GLY 121 VAL 122 GLY 123 ALA 124 SER 125 VAL 126 ALA 127 ARG 128 ALA 129 ALA 130 ARG 131 TRP 132 GLY 133 ARG 134 ILE 135 GLU 136 ASN 137 TYR 138 MET 139 ALA 140 GLN 141 VAL 142 ASN 143 ASP 144 SER 145 LEU 146 CYS 147 LEU 148 LEU 149 VAL 150 GLN 151 VAL 152 GLU 153 SER 154 LYS 155 THR 156 ALA 157 LEU 158 ASP 159 ASN 160 LEU 161 ASP 162 GLU 163 ILE 164 LEU 165 ASP 166 VAL 167 GLU 168 GLY 169 ILE 170 ASP 171 GLY 172 VAL 173 PHE 174 ILE 175 GLY 176 PRO 177 ALA 178 ASP 179 LEU 180 SER 181 ALA 182 SER 183 LEU 184 GLY 185 TYR 186 PRO 187 ASP 188 ASN 189 ALA 190 GLY 191 HIS 192 PRO 193 GLU 194 VAL 195 GLN 196 ARG 197 ILE 198 ILE 199 GLU 200 THR 201 SER 202 ILE 203 ARG 204 ARG 205 ILE 206 ARG 207 ALA 208 ALA 209 GLY 210 LYS 211 ALA 212 ALA 213 GLY 214 PHE 215 LEU 216 ALA 217 VAL 218 ALA 219 PRO 220 ASP 221 MET 222 ALA 223 GLN 224 GLN 225 CYS 226 LEU 227 ALA 228 TRP 229 GLY 230 ALA 231 ASN 232 PHE 233 VAL 234 ALA 235 VAL 236 GLY 237 VAL 238 ASP 239 THR 240 MET 241 LEU 242 TYR 243 SER 244 ASP 245 ALA 246 LEU 247 ASP 248 GLN 249 ARG 250 LEU 251 ALA 252 MET 253 PHE 254 LYS 255 SER 256
Unit 2	MET 1 ASN 2 ALA 3 LEU 4 LEU 5 SER 6 ASN 7 PRO 8 PHE 9 LYS 10 GLU 11 ARG 12 LEU 13 ARG 14 LYS 15 GLY 16 GLU 17 VAL 18 GLN 19 ILE 20 GLY 21 LEU 22 TRP 23 LEU 24 SER 25 SER 26 THR 27 THR 28 ALA 29 TYR 30 MET 31 ALA 32 GLU 33 ILE 34 ALA 35 ALA 36 THR 37 SER 38 GLY 39 TYR 40 ASP 41 TRP 42 LEU 43 LEU 44 ILE 45 ASP 46 GLY 47 GLU 48 HIS 49 ALA 50 PRO 51 ASN 52 THR 53 ILE 54 GLN 55 ASP 56 LEU 57 TYR 58 HIS 59 GLN 60 LEU 61 GLN 62 ALA 63 VAL 64 ALA 65 PRO 66 TYR 67 ALA 68 SER 69 GLN 70 PRO 71 VAL 72 ILE 73 ARG 74 PRO 75 VAL 76 GLU 77 GLY 78 SER 79 LYS 80 PRO 81 LEU 82 ILE 83 LYS 84 GLN 85 VAL 86 LEU 87 ASP 88 ILE 89 GLY 90 ALA 91 GLN 92 THR 93 LEU 94 LEU 95 ILE 96 PRO 97 MET 98 VAL 99 ASP 100 THR 101 ALA 102 GLU 103 GLN 104 ALA 105 ARG 106 GLN 107 VAL 108 VAL 109 SER 110 ALA 111 THR 112 ARG 113 TYR 114 PRO 115 PRO 116 TYR 117 GLY 118 GLU 119 ARG 120 GLY 121 VAL 122 GLY 123 ALA 124 SER 125 VAL 126 ALA 127 ARG 128 ALA 129 ALA 130 ARG 131 TRP 132 GLY 133 ARG 134 ILE 135 GLU 136 ASN 137 TYR 138 MET 139 ALA 140 GLN 141 VAL 142 ASN 143 ASP 144 SER 145 LEU 146 CYS 147 LEU 148 LEU 149 VAL 150 GLN 151 VAL 152 GLU 153 SER 154 LYS 155 THR 156 ALA 157 LEU 158 ASP 159 ASN 160 LEU 161 ASP 162 GLU 163 ILE 164 LEU 165 ASP 166 VAL 167 GLU 168 GLY 169 ILE 170 ASP 171 GLY 172 VAL 173 PHE 174 ILE 175 GLY 176 PRO 177 ALA 178 ASP 179 LEU 180 SER 181 ALA 182 SER 183 LEU 184 GLY 185 TYR 186 PRO 187 ASP 188 ASN 189 ALA 190 GLY 191 HIS 192 PRO 193 GLU 194 VAL 195 GLN 196 ARG 197 ILE 198 ILE 199 GLU 200 THR 201 SER 202 ILE 203 ARG 204 ARG 205 ILE 206 ARG 207 ALA 208 ALA 209 GLY 210 LYS 211 ALA 212 ALA 213 GLY 214 PHE 215 LEU 216 ALA 217 VAL 218 ALA 219 PRO 220 ASP 221 MET 222 ALA 223 GLN 224 GLN 225 CYS 226 LEU 227 ALA 228 TRP 229 GLY 230 ALA 231 ASN 232 PHE 233 VAL 234 ALA 235 VAL 236 GLY 237 VAL 238 ASP 239 THR 240 MET 241 LEU 242 TYR 243 SER 244 ASP 245 ALA 246 LEU 247 ASP 248 GLN 249 ARG 250 LEU 251 ALA 252 MET 253 PHE 254 LYS 255 SER 256
Unit 3	MET 1 ASN 2 ALA 3 LEU 4 LEU 5 SER 6 ASN 7 PRO 8 PHE 9 LYS 10 GLU 11 ARG 12 LEU 13 ARG 14 LYS 15 GLY 16 GLU 17 VAL 18 GLN 19 ILE 20 GLY 21 LEU 22 TRP 23 LEU 24 SER 25 SER 26 THR 27 THR 28 ALA 29 TYR 30 MET 31 ALA 32 GLU 33 ILE 34 ALA 35 ALA 36 THR 37 SER 38 GLY 39 TYR 40 ASP 41 TRP 42 LEU 43 LEU 44 ILE 45 ASP 46 GLY 47 GLU 48 HIS 49 ALA 50 PRO 51 ASN 52 THR 53 ILE 54 GLN 55 ASP 56 LEU 57 TYR 58 HIS 59 GLN 60 LEU 61 GLN 62 ALA 63 VAL 64 ALA 65 PRO 66 TYR 67 ALA 68 SER 69 GLN 70 PRO 71 VAL 72 ILE 73 ARG 74 PRO 75 VAL 76 GLU 77 GLY 78 SER 79 LYS 80 PRO 81 LEU 82 ILE 83 LYS 84 GLN 85 VAL 86 LEU 87 ASP 88 ILE 89 GLY 90 ALA 91 GLN 92 THR 93 LEU 94 LEU 95 ILE 96 PRO 97 MET 98 VAL 99 ASP 100 THR 101 ALA 102 GLU 103 GLN 104 ALA 105 ARG 106 GLN 107 VAL 108 VAL 109 SER 110 ALA 111 THR 112 ARG 113 TYR 114 PRO 115 PRO 116 TYR 117 GLY 118 GLU 119 ARG 120 GLY 121 VAL 122 GLY 123 ALA 124 SER 125 VAL 126 ALA 127 ARG 128 ALA 129 ALA 130 ARG 131 TRP 132 GLY 133 ARG 134 ILE 135 GLU 136 ASN 137 TYR 138 MET 139 ALA 140 GLN 141 VAL 142 ASN 143 ASP 144 SER 145 LEU 146 CYS 147 LEU 148 LEU 149 VAL 150 GLN 151 VAL 152 GLU 153 SER 154 LYS 155 THR 156 ALA 157 LEU 158 ASP 159 ASN 160 LEU 161 ASP 162 GLU 163 ILE 164 LEU 165 ASP 166 VAL 167 GLU 168 GLY 169 ILE 170 ASP 171 GLY 172 VAL 173 PHE 174 ILE 175 GLY 176 PRO 177 ALA 178 ASP 179 LEU 180 SER 181 ALA 182 SER 183 LEU 184 GLY 185 TYR 186 PRO 187 ASP 188 ASN 189 ALA 190 GLY 191 HIS 192 PRO 193 GLU 194 VAL 195 GLN 196 ARG 197 ILE 198 ILE 199 GLU 200 THR 201 SER 202 ILE 203 ARG 204 ARG 205 ILE 206 ARG 207 ALA 208 ALA 209 GLY 210 LYS 211 ALA 212 ALA 213 GLY 214 PHE 215 LEU 216 ALA 217 VAL 218 ALA 219 PRO 220 ASP 221 MET 222 ALA 223 GLN 224 GLN 225 CYS 226 LEU 227 ALA 228 TRP 229 GLY 230 ALA 231 ASN 232 PHE 233 VAL 234 ALA 235 VAL 236 GLY 237 VAL 238 ASP 239 THR 240 MET 241 LEU 242 TYR 243 SER 244 ASP 245 ALA 246 LEU 247 ASP 248 GLN 249 ARG 250 LEU 251 ALA 252 MET 253 PHE 254 LYS 255 SER 256

Ligands

Unit 4	MG 301 PYR 302 PO4 1257
Unit 5	MG 301 PYR 302 PO4 1257
Unit 6	MG 301 PYR 302 PO4 1257 GOL 1258