2VWK - Sequence, Chains, Asymmetric and Biological Units

• Title: URACIL RECOGNITION IN ARCHAEAL DNA POLYMERASES CAPTURED BY X-RAY CRYSTALLOGRAPHY. V93Q POLYMERASE VARIANT
• Keywords: DNA REPLICATION, MULTIFUNCTIONAL ENZYME, NUCLEOTIDYLTRANSFERASE, DNA-DIRECTED DNA POLYMERASE, TRANSFERASE, EXONUCLEASE, DNA-BINDING, DNA POLYMERASE, URACIL, ARCHAEA, NUCLEASE, HYDROLASE, DNA REPAIR
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VWK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA POLYMERASE	A	773	6083	0
2	Ligand	DNA POLYMERASE	A	8	0	36
3	Water			57	0	57
total				838	6083	93

Proteins

Unit 1

MET 1 ILE 2 LEU 3 ASP 4 THR 5 ASP 6 TYR 7 ILE 8 THR 9 GLU 10 ASP 11 GLY 12 LYS 13 PRO 14 VAL 15 ILE 16 ARG 17 ILE 18 PHE 19 LYS 20 LYS 21 GLU 22 ASN 23 GLY 24 GLU 25 PHE 26 LYS 27 ILE 28 ASP 29 TYR 30 ASP 31 ARG 32 ASN 33 PHE 34 GLU 35 PRO 36 TYR 37 ILE 38 TYR 39 ALA 40 LEU 41 LEU 42 LYS 43 ASP 44 ASP 45 SER 46 ALA 47 ILE 48 GLU 49 ASP 50 VAL 51 LYS 52 LYS 53 ILE 54 THR 55 ALA 56 GLU 57 ARG 58 HIS 59 GLY 60 THR 61 THR 62 VAL 63 ARG 64 VAL 65 VAL 66 ARG 67 ALA 68 GLU 69 LYS 70 VAL 71 LYS 72 LYS 73 LYS 74 PHE 75 LEU 76 GLY 77 ARG 78 PRO 79 ILE 80 GLU 81 VAL 82 TRP 83 LYS 84 LEU 85 TYR 86 PHE 87 THR 88 HIS 89 PRO 90 GLN 91 ASP 92 GLN 93 PRO 94 ALA 95 ILE 96 ARG 97 ASP 98 LYS 99 ILE 100 LYS 101 GLU 102 HIS 103 PRO 104 ALA 105 VAL 106 VAL 107 ASP 108 ILE 109 TYR 110 GLU 111 TYR 112 ASP 113 ILE 114 PRO 115 PHE 116 ALA 117 LYS 118 ARG 119 TYR 120 LEU 121 ILE 122 ASP 123 LYS 124 GLY 125 LEU 126 ILE 127 PRO 128 MET 129 GLU 130 GLY 131 ASP 132 GLU 133 GLU 134 LEU 135 LYS 136 MET 137 LEU 138 ALA 139 PHE 140 ASP 141 ILE 142 GLU 143 THR 144 LEU 145 TYR 146 HIS 147 GLU 148 GLY 149 GLU 150 LYS 151 PHE 152 ALA 153 GLU 154 GLY 155 PRO 156 ILE 157 LEU 158 MET 159 ILE 160 SER 161 TYR 162 ALA 163 ASP 164 GLU 165 GLU 166 GLY 167 ALA 168 ARG 169 VAL 170 ILE 171 THR 172 TRP 173 ARG 174 ASN 175 ILE 176 ASP 177 LEU 178 PRO 179 TYR 180 VAL 181 ASP 182 VAL 183 VAL 184 SER 185 THR 186 GLU 187 LYS 188 GLU 189 MET 190 ILE 191 LYS 192 ARG 193 PHE 194 LEU 195 LYS 196 VAL 197 VAL 198 LYS 199 GLU 200 LYS 201 ASP 202 PRO 203 ASP 204 VAL 205 LEU 206 ILE 207 THR 208 TYR 209 ASN 210 GLY 211 ASP 212 ASN 213 PHE 214 ALA 215 PHE 216 ALA 217 TYR 218 LEU 219 LYS 220 LYS 221 ARG 222 SER 223 GLU 224 LYS 225 LEU 226 GLY 227 VAL 228 LYS 229 PHE 230 ILE 231 LEU 232 GLY 233 ARG 234 GLU 235 GLY 236 SER 237 GLU 238 PRO 239 LYS 240 ILE 241 GLN 242 ARG 243 MET 244 GLY 245 ASP 246 ARG 247 PHE 248 ALA 249 VAL 250 GLU 251 VAL 252 LYS 253 GLY 254 ARG 255 ILE 256 HIS 257 PHE 258 ASP 259 LEU 260 TYR 261 PRO 262 VAL 263 ILE 264 ARG 265 ARG 266 THR 267 ILE 268 ASN 269 LEU 270 PRO 271 THR 272 TYR 273 THR 274 LEU 275 GLU 276 ALA 277 VAL 278 TYR 279 GLU 280 ALA 281 ILE 282 PHE 283 GLY 284 GLN 285 PRO 286 LYS 287 GLU 288 LYS 289 VAL 290 TYR 291 ALA 292 GLU 293 GLU 294 ILE 295 ALA 296 GLN 297 ALA 298 TRP 299 GLU 300 THR 301 GLY 302 GLU 303 GLY 304 LEU 305 GLU 306 ARG 307 VAL 308 ALA 309 ARG 310 TYR 311 SER 312 MET 313 GLU 314 ASP 315 ALA 316 LYS 317 VAL 318 THR 319 TYR 320 GLU 321 LEU 322 GLY 323 LYS 324 GLU 325 PHE 326 PHE 327 PRO 328 MET 329 GLU 330 ALA 331 GLN 332 LEU 333 SER 334 ARG 335 LEU 336 VAL 337 GLY 338 GLN 339 SER 340 LEU 341 TRP 342 ASP 343 VAL 344 SER 345 ARG 346 SER 347 SER 348 THR 349 GLY 350 ASN 351 LEU 352 VAL 353 GLU 354 TRP 355 PHE 356 LEU 357 LEU 358 ARG 359 LYS 360 ALA 361 TYR 362 GLU 363 ARG 364 ASN 365 GLU 366 LEU 367 ALA 368 PRO 369 ASN 370 LYS 371 PRO 372 ASP 373 GLU 374 ARG 375 GLU 376 LEU 377 ALA 378 ARG 379 ARG 380 ARG 381 GLU 382 SER 383 TYR 384 ALA 385 GLY 386 GLY 387 TYR 388 VAL 389 LYS 390 GLU 391 PRO 392 GLU 393 ARG 394 GLY 395 LEU 396 TRP 397 GLU 398 ASN 399 ILE 400 VAL 401 TYR 402 LEU 403 ASP 404 PHE 405 ARG 406 SER 407 LEU 408 TYR 409 PRO 410 SER 411 ILE 412 ILE 413 ILE 414 THR 415 HIS 416 ASN 417 VAL 418 SER 419 PRO 420 ASP 421 THR 422 LEU 423 ASN 424 ARG 425 GLU 426 GLY 427 CYS 428 GLU 429 GLU 430 TYR 431 ASP 432 VAL 433 ALA 434 PRO 435 GLN 436 VAL 437 GLY 438 HIS 439 LYS 440 PHE 441 CYS 442 LYS 443 ASP 444 PHE 445 PRO 446 GLY 447 PHE 448 ILE 449 PRO 450 SER 451 LEU 452 LEU 453 GLY 454 ASP 455 LEU 456 LEU 457 GLU 458 GLU 459 ARG 460 GLN 461 LYS 462 VAL 463 LYS 464 LYS 465 LYS 466 MET 467 LYS 468 ALA 469 THR 470 ILE 471 ASP 472 PRO 473 ILE 474 GLU 475 LYS 476 LYS 477 LEU 478 LEU 479 ASP 480 TYR 481 ARG 482 GLN 483 ARG 484 ALA 485 ILE 486 LYS 487 ILE 488 LEU 489 ALA 490 ASN 491 SER 492 PHE 493 TYR 494 GLY 495 TYR 496 TYR 497 GLY 498 TYR 499 ALA 500 LYS 501 ALA 502 ARG 503 TRP 504 TYR 505 CYS 506 LYS 507 GLU 508 CYS 509 ALA 510 GLU 511 SER 512 VAL 513 THR 514 ALA 515 TRP 516 GLY 517 ARG 518 GLN 519 TYR 520 ILE 521 GLU 522 THR 523 THR 524 ILE 525 ARG 526 GLU 527 ILE 528 GLU 529 GLU 530 LYS 531 PHE 532 GLY 533 PHE 534 LYS 535 VAL 536 LEU 537 TYR 538 ALA 539 ASP 540 THR 541 ASP 542 GLY 543 PHE 544 PHE 545 ALA 546 THR 547 ILE 548 PRO 549 GLY 550 ALA 551 ASP 552 ALA 553 GLU 554 THR 555 VAL 556 LYS 557 LYS 558 LYS 559 ALA 560 LYS 561 GLU 562 PHE 563 LEU 564 ASP 565 TYR 566 ILE 567 ASN 568 ALA 569 LYS 570 LEU 571 PRO 572 GLY 573 LEU 574 LEU 575 GLU 576 LEU 577 GLU 578 TYR 579 GLU 580 GLY 581 PHE 582 TYR 583 LYS 584 ARG 585 GLY 586 PHE 587 PHE 588 VAL 589 THR 590 LYS 591 LYS 592 LYS 593 TYR 594 ALA 595 VAL 596 ILE 597 ASP 598 GLU 599 GLU 600 ASP 601 LYS 602 ILE 603 THR 604 THR 605 ARG 606 GLY 607 LEU 608 GLU 609 ILE 610 VAL 611 ARG 612 ARG 613 ASP 614 TRP 615 SER 616 GLU 617 ILE 618 ALA 619 LYS 620 GLU 621 THR 622 GLN 623 ALA 624 ARG 625 VAL 626 LEU 627 GLU 628 ALA 629 ILE 630 LEU 631 LYS 632 HIS 633 GLY 634 ASP 635 VAL 636 GLU 637 GLU 638 ALA 639 VAL 640 ARG 641 ILE 642 VAL 643 LYS 644 GLU 645 VAL 646 THR 647 GLU 648 LYS 649 LEU 650 SER 651 LYS 652 TYR 653 GLU 654 VAL 655 PRO 656 PRO 657 GLU 658 LYS 659 LEU 660 VAL 661 ILE 662 TYR 663 GLU 664 GLN 665 ILE 666 THR 667 ARG 668 ASP 669 LEU 670 LYS 671 ASP 672 TYR 673 LYS 674 ALA 675 THR 676 GLY 677 PRO 678 HIS 679 VAL 680 ALA 681 VAL 682 ALA 683 LYS 684 ARG 685 LEU 686 ALA 687 ALA 688 ARG 689 GLY 690 ILE 691 LYS 692 ILE 693 ARG 694 PRO 695 GLY 696 THR 697 VAL 698 ILE 699 SER 700 TYR 701 ILE 702 VAL 703 LEU 704 LYS 705 GLY 706 SER 707 GLY 708 ARG 709 ILE 710 GLY 711 ASP 712 ARG 713 ALA 714 ILE 715 PRO 716 PHE 717 ASP 718 GLU 719 PHE 720 ASP 721 PRO 722 ALA 723 LYS 724 HIS 725 LYS 726 TYR 727 ASP 728 ALA 729 GLU 730 TYR 731 TYR 732 ILE 733 GLU 734 ASN 735 GLN 736 VAL 737 LEU 738 PRO 739 ALA 740 VAL 741 GLU 742 ARG 743 ILE 744 LEU 745 ARG 746 ALA 747 PHE 748 GLY 749 TYR 750 ARG 751 LYS 752 GLU 753 ASP 754 LEU 755 ARG 756 TYR 757 GLN 758 LYS 759 THR 760 ARG 761 GLN 762 VAL 763 GLY 764 LEU 765 GLY 766 ALA 767 TRP 768 LEU 769 LYS 770 PRO 771 LYS 772 THR 773

Ligands

Unit 2

NA 1774 SO4 1775 SO4 1776 SO4 1777 SO4 1778 SO4 1779 SO4 1780 SO4 1781