2VWE - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF VASCULAR ENDOTHELIAL GROWTH FACTOR-B IN COMPLEX WITH A NEUTRALIZING ANTIBODY FAB FRAGMENT
• Keywords: IMMUNE SYSTEM, GLYCOPROTEIN, CYSTEINE-KNOT, GROWTH FACTOR, VEGF-B, MITOGEN, SECRETED, ANGIOGENESIS, NEUTRALIZING ANTIBODY, HEPARIN-BINDING, ALTERNATIVE SPLICING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VWE	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	VASCULAR ENDOTHELIAL GROWTH FACTOR B	A	98	744	0
2	Protein	VASCULAR ENDOTHELIAL GROWTH FACTOR B	B	98	744	0
3	Protein	ANTI-VEGF-B MONOCLONAL ANTIBODY	C	214	1659	0
4	Protein	ANTI-VEGF-B MONOCLONAL ANTIBODY	E	219	1651	0
5	Protein	ANTI-VEGF-B MONOCLONAL ANTIBODY	J	214	1659	0
6	Protein	ANTI-VEGF-B MONOCLONAL ANTIBODY	L	219	1652	0
total				1062	8109	0

Proteins

Unit 1	GLN 11 ARG 12 LYS 13 VAL 14 VAL 15 SER 16 TRP 17 ILE 18 ASP 19 VAL 20 TYR 21 THR 22 ARG 23 ALA 24 THR 25 CYS 26 GLN 27 PRO 28 ARG 29 GLU 30 VAL 31 VAL 32 VAL 33 PRO 34 LEU 35 THR 36 VAL 37 GLU 38 LEU 39 MET 40 GLY 41 THR 42 VAL 43 ALA 44 LYS 45 GLN 46 LEU 47 VAL 48 PRO 49 SER 50 CYS 51 VAL 52 THR 53 VAL 54 GLN 55 ARG 56 CYS 57 GLY 58 GLY 59 CYS 60 CYS 61 PRO 62 ASP 63 ASP 64 GLY 65 LEU 66 GLU 67 CYS 68 VAL 69 PRO 70 THR 71 GLY 72 GLN 73 HIS 74 GLN 75 VAL 76 ARG 77 MET 78 GLN 79 ILE 80 LEU 81 MET 82 ILE 83 ARG 84 TYR 85 PRO 86 SER 87 SER 88 GLN 89 LEU 90 GLY 91 GLU 92 MET 93 SER 94 LEU 95 GLU 96 GLU 97 HIS 98 SER 99 GLN 100 CYS 101 GLU 102 CYS 103 ARG 104 PRO 105 LYS 106 LYS 107 LYS 108
Unit 2	GLN 11 ARG 12 LYS 13 VAL 14 VAL 15 SER 16 TRP 17 ILE 18 ASP 19 VAL 20 TYR 21 THR 22 ARG 23 ALA 24 THR 25 CYS 26 GLN 27 PRO 28 ARG 29 GLU 30 VAL 31 VAL 32 VAL 33 PRO 34 LEU 35 THR 36 VAL 37 GLU 38 LEU 39 MET 40 GLY 41 THR 42 VAL 43 ALA 44 LYS 45 GLN 46 LEU 47 VAL 48 PRO 49 SER 50 CYS 51 VAL 52 THR 53 VAL 54 GLN 55 ARG 56 CYS 57 GLY 58 GLY 59 CYS 60 CYS 61 PRO 62 ASP 63 ASP 64 GLY 65 LEU 66 GLU 67 CYS 68 VAL 69 PRO 70 THR 71 GLY 72 GLN 73 HIS 74 GLN 75 VAL 76 ARG 77 MET 78 GLN 79 ILE 80 LEU 81 MET 82 ILE 83 ARG 84 TYR 85 PRO 86 SER 87 SER 88 GLN 89 LEU 90 GLY 91 GLU 92 MET 93 SER 94 LEU 95 GLU 96 GLU 97 HIS 98 SER 99 GLN 100 CYS 101 GLU 102 CYS 103 ARG 104 PRO 105 LYS 106 LYS 107 LYS 108
Unit 3	GLU 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 THR 7 THR 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 LEU 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 ILE 29 SER 30 ASN 31 PHE 32 LEU 33 ASN 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 ASP 41 GLY 42 THR 43 VAL 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 TYR 50 THR 51 SER 52 THR 53 LEU 54 HIS 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 SER 76 ASN 77 LEU 78 GLU 79 GLN 80 GLU 81 ASP 82 ILE 83 ALA 84 THR 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 GLY 91 LYS 92 THR 93 LEU 94 PRO 95 PRO 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 106A ARG 107 ALA 108 ASP 109 ALA 110 ALA 111 PRO 112 THR 113 VAL 114 SER 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 SER 121 GLU 122 GLN 123 LEU 124 THR 125 SER 126 GLY 127 GLY 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 PHE 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 LYS 141 GLU 142 ILE 143 ASN 144 VAL 145 LYS 146 TRP 147 LYS 148 ILE 149 ASP 150 GLY 151 SER 152 GLU 153 ARG 154 GLN 155 ASN 156 GLY 157 VAL 158 LEU 159 ASP 160 SER 161 TRP 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 MET 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 THR 181 LYS 182 ASP 183 GLU 184 TYR 185 GLU 186 ARG 187 HIS 188 ASN 189 SER 190 TYR 191 THR 192 CYS 193 GLU 194 ALA 195 THR 196 HIS 197 LYS 198 THR 199 SER 200 THR 201 SER 202 PRO 203 ILE 204 VAL 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 ASN 211 GLU 212 CYS 213
Unit 4	GLN 1 VAL 2 GLN 3 LEU 4 GLN 5 GLN 6 PRO 7 GLY 8 THR 9 GLU 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 LEU 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 GLY 31 PHE 32 TRP 33 ILE 34 HIS 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 HIS 50 ILE 51 ASN 52 PRO 52A GLY 53 ASN 54 GLY 55 GLY 56 THR 57 ASN 58 TYR 59 ASN 60 GLU 61 LYS 62 PHE 63 LYS 64 ARG 65 MET 66 ALA 67 THR 68 LEU 69 THR 70 VAL 71 ASP 72 LYS 73 SER 74 SER 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLN 81 LEU 82 SER 82A SER 82B LEU 82C THR 83 SER 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 SER 95 TYR 96 SER 97 ASN 98 TYR 99 VAL 100 ARG 100A ALA 100B MET 100C ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 VAL 125 PRO 126 VAL 127 CYS 128 GLY 129 GLY 130 THR 131 THR 132 GLY 133 SER 134 SER 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 LEU 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 SER 158 LEU 159 SER 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 LEU 169 LEU 170 GLN 171 SER 172 GLY 173 LEU 174 TYR 175 THR 176 LEU 177 SER 178 SER 179 SER 180 VAL 181 THR 182 VAL 183 THR 184 SER 185 ASN 186 THR 187 TRP 188 PRO 189 SER 190 GLN 191 THR 192 ILE 193 THR 194 CYS 195 ASN 196 VAL 197 ALA 198 HIS 199 PRO 200 ALA 201 SER 202 SER 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 ILE 210 GLU 211 PRO 212
Unit 5	GLU 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 THR 7 THR 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 LEU 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 ILE 29 SER 30 ASN 31 PHE 32 LEU 33 ASN 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 ASP 41 GLY 42 THR 43 VAL 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 TYR 50 THR 51 SER 52 THR 53 LEU 54 HIS 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 SER 76 ASN 77 LEU 78 GLU 79 GLN 80 GLU 81 ASP 82 ILE 83 ALA 84 THR 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 GLY 91 LYS 92 THR 93 LEU 94 PRO 95 PRO 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 106A ARG 107 ALA 108 ASP 109 ALA 110 ALA 111 PRO 112 THR 113 VAL 114 SER 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 SER 121 GLU 122 GLN 123 LEU 124 THR 125 SER 126 GLY 127 GLY 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 PHE 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 LYS 141 GLU 142 ILE 143 ASN 144 VAL 145 LYS 146 TRP 147 LYS 148 ILE 149 ASP 150 GLY 151 SER 152 GLU 153 ARG 154 GLN 155 ASN 156 GLY 157 VAL 158 LEU 159 ASP 160 SER 161 TRP 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 MET 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 THR 181 LYS 182 ASP 183 GLU 184 TYR 185 GLU 186 ARG 187 HIS 188 ASN 189 SER 190 TYR 191 THR 192 CYS 193 GLU 194 ALA 195 THR 196 HIS 197 LYS 198 THR 199 SER 200 THR 201 SER 202 PRO 203 ILE 204 VAL 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 ASN 211 GLU 212 CYS 213
Unit 6	GLN 1 VAL 2 GLN 3 LEU 4 GLN 5 GLN 6 PRO 7 GLY 8 THR 9 GLU 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 LEU 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 GLY 31 PHE 32 TRP 33 ILE 34 HIS 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 HIS 50 ILE 51 ASN 52 PRO 52A GLY 53 ASN 54 GLY 55 GLY 56 THR 57 ASN 58 TYR 59 ASN 60 GLU 61 LYS 62 PHE 63 LYS 64 ARG 65 MET 66 ALA 67 THR 68 LEU 69 THR 70 VAL 71 ASP 72 LYS 73 SER 74 SER 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLN 81 LEU 82 SER 82A SER 82B LEU 82C THR 83 SER 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 SER 95 TYR 96 SER 97 ASN 98 TYR 99 VAL 100 ARG 100A ALA 100B MET 100C ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 VAL 125 PRO 126 VAL 127 CYS 128 GLY 129 GLY 130 THR 131 THR 132 GLY 133 SER 134 SER 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 LEU 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 SER 158 LEU 159 SER 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 LEU 169 LEU 170 GLN 171 SER 172 GLY 173 LEU 174 TYR 175 THR 176 LEU 177 SER 178 SER 179 SER 180 VAL 181 THR 182 VAL 183 THR 184 SER 185 ASN 186 THR 187 TRP 188 PRO 189 SER 190 GLN 191 THR 192 ILE 193 THR 194 CYS 195 ASN 196 VAL 197 ALA 198 HIS 199 PRO 200 ALA 201 SER 202 SER 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 ILE 210 GLU 211 PRO 212