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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF ENAMIDASE AT 1.9 A RESOLUTION - A NEW MEMBER OF THE AMIDOHYDROLASE SUPERFAMILY
Keywords NICOTINATE DEGRADATION, BINUCLEAR METAL CENTER, AMIDOHYDROLASES, STEREOSPECIFICITY, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VUN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ENAMIDASE  A 385 2785 0
2  Protein   ENAMIDASE  B 385 2785 0
3  Protein   ENAMIDASE  C 385 2785 0
4  Protein   ENAMIDASE  D 385 2785 0
5  Ligand   ENAMIDASE  A 5 0 15
6  Ligand   ENAMIDASE  B 4 0 9
7  Ligand   ENAMIDASE  C 4 0 9
8  Ligand   ENAMIDASE  D 4 0 9
9 Water     1235 0 1235
total       2792 11140 1277

Proteins
Unit 1 SER2 LYS3 THR4 ILE5 ILE6 LYS7 ASN8 ILE9 GLY10 LYS11 ILE12 VAL13 SER14 GLY15 ASP16 ILE17 LYS18 SER19 PRO20 VAL21 LEU22 GLN23 ALA24 ASP25 THR26 ILE27 VAL28 VAL29 GLU30 ASP31 GLY32 LEU33 ILE34 ALA35 ALA36 ILE37 GLY38 GLY39 GLU40 GLU41 LEU42 MET43 LYS44 ASP45 ALA46 GLY47 ASP48 ALA49 THR50 ILE51 ILE52 ASP53 ALA54 ALA55 GLY56 SER57 THR58 VAL59 THR60 PRO61 GLY62 LEU63 LEU64 ASP65 THR66 HIS67 VAL68 HIS69 VAL70 SER71 GLY72 GLY73 ASP74 TYR75 ALA76 PRO77 ARG78 GLN79 LYS80 THR81 MET82 ASP83 PHE84 ILE85 SER86 SER87 ALA88 LEU89 HIS90 GLY91 GLY92 VAL93 THR94 THR95 MET96 ILE97 SER98 ALA99 GLY100 SER101 PRO102 HIS103 PHE104 PRO105 GLY106 ARG107 PRO108 LYS109 ASP110 ALA111 ALA112 GLY113 THR114 LYS115 ALA116 LEU117 ALA118 ILE119 THR120 LEU121 SER122 LYS123 SER124 TYR125 TYR126 ASN127 ALA128 ARG129 PRO130 ALA131 GLY132 VAL133 LYS134 VAL135 HIS136 GLY137 GLY138 ALA139 VAL140 ILE141 LEU142 GLU143 LYS144 GLY145 LEU146 THR147 GLU148 GLU149 ASP150 PHE151 ILE152 GLU153 MET154 LYS155 LYS156 GLU157 GLY158 VAL159 TRP160 ILE161 VAL162 GLY163 GLU164 VAL165 GLY166 LEU167 GLY168 THR169 ILE170 LYS171 ASN172 PRO173 GLU174 ASP175 ALA176 ALA177 PRO178 MET179 VAL180 GLU181 TRP182 ALA183 HIS184 LYS185 HIS186 GLY187 PHE188 LYS189 VAL190 GLN191 MET192 HIS193 THR194 GLY195 GLY196 THR197 SER198 ILE199 PRO200 GLY201 SER202 SER203 THR204 VAL205 THR206 ALA207 ASP208 ASP209 VAL210 ILE211 LYS212 THR213 LYS214 PRO215 ASP216 VAL217 VAL218 SER219 HIS220 ILE221 ASN222 GLY223 GLY224 PRO225 THR226 ALA227 ILE228 SER229 VAL230 GLN231 GLU232 VAL233 ASP234 ARG235 ILE236 MET237 ASP238 GLU239 THR240 ASP241 PHE242 ALA243 MET244 GLU245 ILE246 VAL247 GLN248 CYS249 GLY250 ASN251 PRO252 LYS253 ILE254 ALA255 ASP256 TYR257 VAL258 ALA259 ARG260 ARG261 ALA262 ALA263 GLU264 LYS265 GLY266 GLN267 LEU268 GLY269 ARG270 VAL271 ILE272 PHE273 GLY274 ASN275 ASP276 ALA277 PRO278 SER279 GLY280 THR281 GLY282 LEU283 ILE284 PRO285 LEU286 GLY287 ILE288 LEU289 ARG290 ASN291 MET292 CYS293 GLN294 ILE295 ALA296 SER297 MET298 SER299 ASP300 ILE301 ASP302 PRO303 GLU304 VAL305 ALA306 VAL307 CYS308 MET309 ALA310 THR311 GLY312 ASN313 SER314 THR315 ALA316 VAL317 TYR318 GLY319 LEU320 ASN321 THR322 GLY323 VAL324 ILE325 ALA326 PRO327 GLY328 LYS329 GLU330 ALA331 ASP332 LEU333 ILE334 ILE335 MET336 ASP337 THR338 PRO339 LEU340 GLY341 SER342 VAL343 ALA344 GLU345 ASP346 ALA347 MET348 GLY349 ALA350 ILE351 ALA352 ALA353 GLY354 ASP355 ILE356 PRO357 GLY358 ILE359 SER360 VAL361 VAL362 LEU363 ILE364 ASP365 GLY366 GLU367 ALA368 VAL369 VAL370 THR371 LYS372 SER373 ARG374 ASN375 THR376 PRO377 PRO378 ALA379 LYS380 ARG381 ALA382 ALA383 LYS384 ILE385 LEU386
Unit 2 SER2 LYS3 THR4 ILE5 ILE6 LYS7 ASN8 ILE9 GLY10 LYS11 ILE12 VAL13 SER14 GLY15 ASP16 ILE17 LYS18 SER19 PRO20 VAL21 LEU22 GLN23 ALA24 ASP25 THR26 ILE27 VAL28 VAL29 GLU30 ASP31 GLY32 LEU33 ILE34 ALA35 ALA36 ILE37 GLY38 GLY39 GLU40 GLU41 LEU42 MET43 LYS44 ASP45 ALA46 GLY47 ASP48 ALA49 THR50 ILE51 ILE52 ASP53 ALA54 ALA55 GLY56 SER57 THR58 VAL59 THR60 PRO61 GLY62 LEU63 LEU64 ASP65 THR66 HIS67 VAL68 HIS69 VAL70 SER71 GLY72 GLY73 ASP74 TYR75 ALA76 PRO77 ARG78 GLN79 LYS80 THR81 MET82 ASP83 PHE84 ILE85 SER86 SER87 ALA88 LEU89 HIS90 GLY91 GLY92 VAL93 THR94 THR95 MET96 ILE97 SER98 ALA99 GLY100 SER101 PRO102 HIS103 PHE104 PRO105 GLY106 ARG107 PRO108 LYS109 ASP110 ALA111 ALA112 GLY113 THR114 LYS115 ALA116 LEU117 ALA118 ILE119 THR120 LEU121 SER122 LYS123 SER124 TYR125 TYR126 ASN127 ALA128 ARG129 PRO130 ALA131 GLY132 VAL133 LYS134 VAL135 HIS136 GLY137 GLY138 ALA139 VAL140 ILE141 LEU142 GLU143 LYS144 GLY145 LEU146 THR147 GLU148 GLU149 ASP150 PHE151 ILE152 GLU153 MET154 LYS155 LYS156 GLU157 GLY158 VAL159 TRP160 ILE161 VAL162 GLY163 GLU164 VAL165 GLY166 LEU167 GLY168 THR169 ILE170 LYS171 ASN172 PRO173 GLU174 ASP175 ALA176 ALA177 PRO178 MET179 VAL180 GLU181 TRP182 ALA183 HIS184 LYS185 HIS186 GLY187 PHE188 LYS189 VAL190 GLN191 MET192 HIS193 THR194 GLY195 GLY196 THR197 SER198 ILE199 PRO200 GLY201 SER202 SER203 THR204 VAL205 THR206 ALA207 ASP208 ASP209 VAL210 ILE211 LYS212 THR213 LYS214 PRO215 ASP216 VAL217 VAL218 SER219 HIS220 ILE221 ASN222 GLY223 GLY224 PRO225 THR226 ALA227 ILE228 SER229 VAL230 GLN231 GLU232 VAL233 ASP234 ARG235 ILE236 MET237 ASP238 GLU239 THR240 ASP241 PHE242 ALA243 MET244 GLU245 ILE246 VAL247 GLN248 CYS249 GLY250 ASN251 PRO252 LYS253 ILE254 ALA255 ASP256 TYR257 VAL258 ALA259 ARG260 ARG261 ALA262 ALA263 GLU264 LYS265 GLY266 GLN267 LEU268 GLY269 ARG270 VAL271 ILE272 PHE273 GLY274 ASN275 ASP276 ALA277 PRO278 SER279 GLY280 THR281 GLY282 LEU283 ILE284 PRO285 LEU286 GLY287 ILE288 LEU289 ARG290 ASN291 MET292 CYS293 GLN294 ILE295 ALA296 SER297 MET298 SER299 ASP300 ILE301 ASP302 PRO303 GLU304 VAL305 ALA306 VAL307 CYS308 MET309 ALA310 THR311 GLY312 ASN313 SER314 THR315 ALA316 VAL317 TYR318 GLY319 LEU320 ASN321 THR322 GLY323 VAL324 ILE325 ALA326 PRO327 GLY328 LYS329 GLU330 ALA331 ASP332 LEU333 ILE334 ILE335 MET336 ASP337 THR338 PRO339 LEU340 GLY341 SER342 VAL343 ALA344 GLU345 ASP346 ALA347 MET348 GLY349 ALA350 ILE351 ALA352 ALA353 GLY354 ASP355 ILE356 PRO357 GLY358 ILE359 SER360 VAL361 VAL362 LEU363 ILE364 ASP365 GLY366 GLU367 ALA368 VAL369 VAL370 THR371 LYS372 SER373 ARG374 ASN375 THR376 PRO377 PRO378 ALA379 LYS380 ARG381 ALA382 ALA383 LYS384 ILE385 LEU386
Unit 3 SER2 LYS3 THR4 ILE5 ILE6 LYS7 ASN8 ILE9 GLY10 LYS11 ILE12 VAL13 SER14 GLY15 ASP16 ILE17 LYS18 SER19 PRO20 VAL21 LEU22 GLN23 ALA24 ASP25 THR26 ILE27 VAL28 VAL29 GLU30 ASP31 GLY32 LEU33 ILE34 ALA35 ALA36 ILE37 GLY38 GLY39 GLU40 GLU41 LEU42 MET43 LYS44 ASP45 ALA46 GLY47 ASP48 ALA49 THR50 ILE51 ILE52 ASP53 ALA54 ALA55 GLY56 SER57 THR58 VAL59 THR60 PRO61 GLY62 LEU63 LEU64 ASP65 THR66 HIS67 VAL68 HIS69 VAL70 SER71 GLY72 GLY73 ASP74 TYR75 ALA76 PRO77 ARG78 GLN79 LYS80 THR81 MET82 ASP83 PHE84 ILE85 SER86 SER87 ALA88 LEU89 HIS90 GLY91 GLY92 VAL93 THR94 THR95 MET96 ILE97 SER98 ALA99 GLY100 SER101 PRO102 HIS103 PHE104 PRO105 GLY106 ARG107 PRO108 LYS109 ASP110 ALA111 ALA112 GLY113 THR114 LYS115 ALA116 LEU117 ALA118 ILE119 THR120 LEU121 SER122 LYS123 SER124 TYR125 TYR126 ASN127 ALA128 ARG129 PRO130 ALA131 GLY132 VAL133 LYS134 VAL135 HIS136 GLY137 GLY138 ALA139 VAL140 ILE141 LEU142 GLU143 LYS144 GLY145 LEU146 THR147 GLU148 GLU149 ASP150 PHE151 ILE152 GLU153 MET154 LYS155 LYS156 GLU157 GLY158 VAL159 TRP160 ILE161 VAL162 GLY163 GLU164 VAL165 GLY166 LEU167 GLY168 THR169 ILE170 LYS171 ASN172 PRO173 GLU174 ASP175 ALA176 ALA177 PRO178 MET179 VAL180 GLU181 TRP182 ALA183 HIS184 LYS185 HIS186 GLY187 PHE188 LYS189 VAL190 GLN191 MET192 HIS193 THR194 GLY195 GLY196 THR197 SER198 ILE199 PRO200 GLY201 SER202 SER203 THR204 VAL205 THR206 ALA207 ASP208 ASP209 VAL210 ILE211 LYS212 THR213 LYS214 PRO215 ASP216 VAL217 VAL218 SER219 HIS220 ILE221 ASN222 GLY223 GLY224 PRO225 THR226 ALA227 ILE228 SER229 VAL230 GLN231 GLU232 VAL233 ASP234 ARG235 ILE236 MET237 ASP238 GLU239 THR240 ASP241 PHE242 ALA243 MET244 GLU245 ILE246 VAL247 GLN248 CYS249 GLY250 ASN251 PRO252 LYS253 ILE254 ALA255 ASP256 TYR257 VAL258 ALA259 ARG260 ARG261 ALA262 ALA263 GLU264 LYS265 GLY266 GLN267 LEU268 GLY269 ARG270 VAL271 ILE272 PHE273 GLY274 ASN275 ASP276 ALA277 PRO278 SER279 GLY280 THR281 GLY282 LEU283 ILE284 PRO285 LEU286 GLY287 ILE288 LEU289 ARG290 ASN291 MET292 CYS293 GLN294 ILE295 ALA296 SER297 MET298 SER299 ASP300 ILE301 ASP302 PRO303 GLU304 VAL305 ALA306 VAL307 CYS308 MET309 ALA310 THR311 GLY312 ASN313 SER314 THR315 ALA316 VAL317 TYR318 GLY319 LEU320 ASN321 THR322 GLY323 VAL324 ILE325 ALA326 PRO327 GLY328 LYS329 GLU330 ALA331 ASP332 LEU333 ILE334 ILE335 MET336 ASP337 THR338 PRO339 LEU340 GLY341 SER342 VAL343 ALA344 GLU345 ASP346 ALA347 MET348 GLY349 ALA350 ILE351 ALA352 ALA353 GLY354 ASP355 ILE356 PRO357 GLY358 ILE359 SER360 VAL361 VAL362 LEU363 ILE364 ASP365 GLY366 GLU367 ALA368 VAL369 VAL370 THR371 LYS372 SER373 ARG374 ASN375 THR376 PRO377 PRO378 ALA379 LYS380 ARG381 ALA382 ALA383 LYS384 ILE385 LEU386
Unit 4 SER2 LYS3 THR4 ILE5 ILE6 LYS7 ASN8 ILE9 GLY10 LYS11 ILE12 VAL13 SER14 GLY15 ASP16 ILE17 LYS18 SER19 PRO20 VAL21 LEU22 GLN23 ALA24 ASP25 THR26 ILE27 VAL28 VAL29 GLU30 ASP31 GLY32 LEU33 ILE34 ALA35 ALA36 ILE37 GLY38 GLY39 GLU40 GLU41 LEU42 MET43 LYS44 ASP45 ALA46 GLY47 ASP48 ALA49 THR50 ILE51 ILE52 ASP53 ALA54 ALA55 GLY56 SER57 THR58 VAL59 THR60 PRO61 GLY62 LEU63 LEU64 ASP65 THR66 HIS67 VAL68 HIS69 VAL70 SER71 GLY72 GLY73 ASP74 TYR75 ALA76 PRO77 ARG78 GLN79 LYS80 THR81 MET82 ASP83 PHE84 ILE85 SER86 SER87 ALA88 LEU89 HIS90 GLY91 GLY92 VAL93 THR94 THR95 MET96 ILE97 SER98 ALA99 GLY100 SER101 PRO102 HIS103 PHE104 PRO105 GLY106 ARG107 PRO108 LYS109 ASP110 ALA111 ALA112 GLY113 THR114 LYS115 ALA116 LEU117 ALA118 ILE119 THR120 LEU121 SER122 LYS123 SER124 TYR125 TYR126 ASN127 ALA128 ARG129 PRO130 ALA131 GLY132 VAL133 LYS134 VAL135 HIS136 GLY137 GLY138 ALA139 VAL140 ILE141 LEU142 GLU143 LYS144 GLY145 LEU146 THR147 GLU148 GLU149 ASP150 PHE151 ILE152 GLU153 MET154 LYS155 LYS156 GLU157 GLY158 VAL159 TRP160 ILE161 VAL162 GLY163 GLU164 VAL165 GLY166 LEU167 GLY168 THR169 ILE170 LYS171 ASN172 PRO173 GLU174 ASP175 ALA176 ALA177 PRO178 MET179 VAL180 GLU181 TRP182 ALA183 HIS184 LYS185 HIS186 GLY187 PHE188 LYS189 VAL190 GLN191 MET192 HIS193 THR194 GLY195 GLY196 THR197 SER198 ILE199 PRO200 GLY201 SER202 SER203 THR204 VAL205 THR206 ALA207 ASP208 ASP209 VAL210 ILE211 LYS212 THR213 LYS214 PRO215 ASP216 VAL217 VAL218 SER219 HIS220 ILE221 ASN222 GLY223 GLY224 PRO225 THR226 ALA227 ILE228 SER229 VAL230 GLN231 GLU232 VAL233 ASP234 ARG235 ILE236 MET237 ASP238 GLU239 THR240 ASP241 PHE242 ALA243 MET244 GLU245 ILE246 VAL247 GLN248 CYS249 GLY250 ASN251 PRO252 LYS253 ILE254 ALA255 ASP256 TYR257 VAL258 ALA259 ARG260 ARG261 ALA262 ALA263 GLU264 LYS265 GLY266 GLN267 LEU268 GLY269 ARG270 VAL271 ILE272 PHE273 GLY274 ASN275 ASP276 ALA277 PRO278 SER279 GLY280 THR281 GLY282 LEU283 ILE284 PRO285 LEU286 GLY287 ILE288 LEU289 ARG290 ASN291 MET292 CYS293 GLN294 ILE295 ALA296 SER297 MET298 SER299 ASP300 ILE301 ASP302 PRO303 GLU304 VAL305 ALA306 VAL307 CYS308 MET309 ALA310 THR311 GLY312 ASN313 SER314 THR315 ALA316 VAL317 TYR318 GLY319 LEU320 ASN321 THR322 GLY323 VAL324 ILE325 ALA326 PRO327 GLY328 LYS329 GLU330 ALA331 ASP332 LEU333 ILE334 ILE335 MET336 ASP337 THR338 PRO339 LEU340 GLY341 SER342 VAL343 ALA344 GLU345 ASP346 ALA347 MET348 GLY349 ALA350 ILE351 ALA352 ALA353 GLY354 ASP355 ILE356 PRO357 GLY358 ILE359 SER360 VAL361 VAL362 LEU363 ILE364 ASP365 GLY366 GLU367 ALA368 VAL369 VAL370 THR371 LYS372 SER373 ARG374 ASN375 THR376 PRO377 PRO378 ALA379 LYS380 ARG381 ALA382 ALA383 LYS384 ILE385 LEU386

Ligands
Unit 5 ZN401 FE402 CL501 GOL1390 GOL1391
Unit 6 ZN401 FE402 CL501 GOL1390
Unit 7 ZN401 FE402 CL501 GOL1390
Unit 8 ZN401 FE402 CL501 GOL1390

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany