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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A TRANSLATION INITIATION COMPLEX
Keywords ACETYLATION, ATP-BINDING, PHOSPHOPROTEIN, PROTEIN BIOSYNTHESIS, TRANSLATION REGULATION, TRANSLATION INITIATION, HYDROLASE/TRANSLATION, INITIATION FACTOR, NUCLEOTIDE-BINDING, HELICASE, HYDROLASE, CYTOPLASM, RNA-BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VSO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ATP-DEPENDENT RNA HELICASE EIF4A  A 366 2907 0
2  Protein   ATP-DEPENDENT RNA HELICASE EIF4A  B 366 2907 0
3  Protein   EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150  E 239 1887 0
4  Protein   EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150  F 237 1871 0
5  Ligand   ATP-DEPENDENT RNA HELICASE EIF4A  A 1 0 23
6  Ligand   ATP-DEPENDENT RNA HELICASE EIF4A  B 1 0 23
7 Water     76 0 76
total       1286 9572 122

Proteins
Unit 1 GLN12 ILE13 GLN14 THR15 ASN16 TYR17 ASP18 LYS19 VAL20 VAL21 TYR22 LYS23 PHE24 ASP25 ASP26 MET27 GLU28 LEU29 ASP30 GLU31 ASN32 LEU33 LEU34 ARG35 GLY36 VAL37 PHE38 GLY39 TYR40 GLY41 PHE42 GLU43 GLU44 PRO45 SER46 ALA47 ILE48 GLN49 GLN50 ARG51 ALA52 ILE53 MET54 PRO55 ILE56 ILE57 GLU58 GLY59 HIS60 ASP61 VAL62 LEU63 ALA64 GLN65 ALA66 GLN67 SER68 GLY69 THR70 GLY71 LYS72 THR73 GLY74 THR75 PHE76 SER77 ILE78 ALA79 ALA80 LEU81 GLN82 ARG83 ILE84 ASP85 THR86 SER87 VAL88 LYS89 ALA90 PRO91 GLN92 ALA93 LEU94 MET95 LEU96 ALA97 PRO98 THR99 ARG100 GLU101 LEU102 ALA103 LEU104 GLN105 ILE106 GLN107 LYS108 VAL109 VAL110 MET111 ALA112 LEU113 ALA114 PHE115 HIS116 MET117 ASP118 ILE119 LYS120 VAL121 HIS122 ALA123 CYS124 ILE125 GLY136 LEU137 ARG138 ASP139 ALA140 GLN141 ILE142 VAL143 VAL144 GLY145 THR146 PRO147 GLY148 ARG149 VAL150 PHE151 ASP152 ASN153 ILE154 GLN155 ARG156 ARG157 ARG158 PHE159 ARG160 THR161 ASP162 LYS163 ILE164 LYS165 MET166 PHE167 ILE168 LEU169 ASP170 GLU171 ALA172 ASP173 GLU174 MET175 LEU176 SER177 SER178 GLY179 PHE180 LYS181 GLU182 GLN183 ILE184 TYR185 GLN186 ILE187 PHE188 THR189 LEU190 LEU191 PRO192 PRO193 THR194 THR195 GLN196 VAL197 VAL198 LEU199 LEU200 SER201 ALA202 THR203 MET204 PRO205 ASN206 ASP207 VAL208 LEU209 GLU210 VAL211 THR212 THR213 LYS214 PHE215 MET216 ARG217 ASN218 PRO219 VAL220 ARG221 ILE222 LEU223 VAL224 LYS225 LYS226 ASP227 GLU228 LEU229 THR230 LEU231 GLU232 GLY233 ILE234 LYS235 GLN236 PHE237 TYR238 VAL239 ASN240 VAL241 GLU242 GLU243 GLU244 GLU245 TYR246 LYS247 TYR248 GLU249 CYS250 LEU251 THR252 ASP253 LEU254 TYR255 ASP256 SER257 ILE258 SER259 VAL260 THR261 GLN262 ALA263 VAL264 ILE265 PHE266 CYS267 ASN268 THR269 ARG270 ARG271 LYS272 VAL273 GLU274 GLU275 LEU276 THR277 THR278 LYS279 LEU280 ARG281 ASN282 ASP283 LYS284 PHE285 THR286 VAL287 SER288 ALA289 ILE290 TYR291 SER292 ASP293 LEU294 PRO295 GLN296 GLN297 GLU298 ARG299 ASP300 THR301 ILE302 MET303 LYS304 GLU305 PHE306 ARG307 SER308 GLY309 SER310 SER311 ARG312 ILE313 LEU314 ILE315 SER316 THR317 ASP318 LEU319 LEU320 ALA321 ARG322 GLY323 ILE324 ASP325 VAL326 GLN327 GLN328 VAL329 SER330 LEU331 VAL332 ILE333 ASN334 TYR335 ASP336 LEU337 PRO338 ALA339 ASN340 LYS341 GLU342 ASN343 TYR344 ILE345 HIS346 ARG347 ILE348 GLY349 ARG350 LYS357 GLY358 VAL359 ALA360 ILE361 ASN362 PHE363 VAL364 THR365 ASN366 GLU367 ASP368 VAL369 GLY370 ALA371 MET372 ARG373 GLU374 LEU375 GLU376 LYS377 PHE378 TYR379 SER380 THR381 GLN382 ILE383 GLU384 GLU385 LEU386 PRO387 SER388 ASP389 ILE390 ALA391 THR392 LEU393
Unit 2 GLN12 ILE13 GLN14 THR15 ASN16 TYR17 ASP18 LYS19 VAL20 VAL21 TYR22 LYS23 PHE24 ASP25 ASP26 MET27 GLU28 LEU29 ASP30 GLU31 ASN32 LEU33 LEU34 ARG35 GLY36 VAL37 PHE38 GLY39 TYR40 GLY41 PHE42 GLU43 GLU44 PRO45 SER46 ALA47 ILE48 GLN49 GLN50 ARG51 ALA52 ILE53 MET54 PRO55 ILE56 ILE57 GLU58 GLY59 HIS60 ASP61 VAL62 LEU63 ALA64 GLN65 ALA66 GLN67 SER68 GLY69 THR70 GLY71 LYS72 THR73 GLY74 THR75 PHE76 SER77 ILE78 ALA79 ALA80 LEU81 GLN82 ARG83 ILE84 ASP85 THR86 SER87 VAL88 LYS89 ALA90 PRO91 GLN92 ALA93 LEU94 MET95 LEU96 ALA97 PRO98 THR99 ARG100 GLU101 LEU102 ALA103 LEU104 GLN105 ILE106 GLN107 LYS108 VAL109 VAL110 MET111 ALA112 LEU113 ALA114 PHE115 HIS116 MET117 ASP118 ILE119 LYS120 VAL121 HIS122 ALA123 CYS124 ILE125 GLY136 LEU137 ARG138 ASP139 ALA140 GLN141 ILE142 VAL143 VAL144 GLY145 THR146 PRO147 GLY148 ARG149 VAL150 PHE151 ASP152 ASN153 ILE154 GLN155 ARG156 ARG157 ARG158 PHE159 ARG160 THR161 ASP162 LYS163 ILE164 LYS165 MET166 PHE167 ILE168 LEU169 ASP170 GLU171 ALA172 ASP173 GLU174 MET175 LEU176 SER177 SER178 GLY179 PHE180 LYS181 GLU182 GLN183 ILE184 TYR185 GLN186 ILE187 PHE188 THR189 LEU190 LEU191 PRO192 PRO193 THR194 THR195 GLN196 VAL197 VAL198 LEU199 LEU200 SER201 ALA202 THR203 MET204 PRO205 ASN206 ASP207 VAL208 LEU209 GLU210 VAL211 THR212 THR213 LYS214 PHE215 MET216 ARG217 ASN218 PRO219 VAL220 ARG221 ILE222 LEU223 VAL224 LYS225 LYS226 ASP227 GLU228 LEU229 THR230 LEU231 GLU232 GLY233 ILE234 LYS235 GLN236 PHE237 TYR238 VAL239 ASN240 VAL241 GLU242 GLU243 GLU244 GLU245 TYR246 LYS247 TYR248 GLU249 CYS250 LEU251 THR252 ASP253 LEU254 TYR255 ASP256 SER257 ILE258 SER259 VAL260 THR261 GLN262 ALA263 VAL264 ILE265 PHE266 CYS267 ASN268 THR269 ARG270 ARG271 LYS272 VAL273 GLU274 GLU275 LEU276 THR277 THR278 LYS279 LEU280 ARG281 ASN282 ASP283 LYS284 PHE285 THR286 VAL287 SER288 ALA289 ILE290 TYR291 SER292 ASP293 LEU294 PRO295 GLN296 GLN297 GLU298 ARG299 ASP300 THR301 ILE302 MET303 LYS304 GLU305 PHE306 ARG307 SER308 GLY309 SER310 SER311 ARG312 ILE313 LEU314 ILE315 SER316 THR317 ASP318 LEU319 LEU320 ALA321 ARG322 GLY323 ILE324 ASP325 VAL326 GLN327 GLN328 VAL329 SER330 LEU331 VAL332 ILE333 ASN334 TYR335 ASP336 LEU337 PRO338 ALA339 ASN340 LYS341 GLU342 ASN343 TYR344 ILE345 HIS346 ARG347 ILE348 GLY349 ARG350 LYS357 GLY358 VAL359 ALA360 ILE361 ASN362 PHE363 VAL364 THR365 ASN366 GLU367 ASP368 VAL369 GLY370 ALA371 MET372 ARG373 GLU374 LEU375 GLU376 LYS377 PHE378 TYR379 SER380 THR381 GLN382 ILE383 GLU384 GLU385 LEU386 PRO387 SER388 ASP389 ILE390 ALA391 THR392 LEU393
Unit 3 ASN577 ARG578 TRP579 VAL580 PRO581 LYS582 THR598 GLU599 LEU600 LEU601 ASP602 LYS603 ASP604 GLU605 VAL606 GLU607 ARG608 LYS609 MET610 LYS611 SER612 LEU613 LEU614 ASN615 LYS616 LEU617 THR618 LEU619 GLU620 MET621 PHE622 ASP623 ALA624 ILE625 SER626 SER627 GLU628 ILE629 LEU630 ALA631 ILE632 ALA633 ASN634 ILE635 SER636 VAL637 TRP638 GLU639 THR640 ASN641 GLY642 GLU643 THR644 LEU645 LYS646 ALA647 VAL648 ILE649 GLU650 GLN651 ILE652 PHE653 LEU654 LYS655 ALA656 CYS657 ASP658 GLU659 PRO660 HIS661 TRP662 SER663 SER664 MET665 TYR666 ALA667 GLN668 LEU669 CYS670 GLY671 LYS672 VAL673 VAL674 LYS675 GLU676 LEU677 ASN678 PRO679 ASP680 ILE681 THR682 ASP683 GLU684 THR685 LYS689 THR690 GLY691 PRO692 LYS693 LEU694 VAL695 LEU696 HIS697 TYR698 LEU699 VAL700 ALA701 ARG702 CYS703 HIS704 ALA705 GLU706 PHE707 ASP708 LYS709 GLY710 TRP711 THR712 ASP713 LYS714 LEU715 PRO716 MET729 SER730 GLU731 GLU732 TYR733 TYR734 ALA735 ALA736 ALA737 SER738 ALA739 LYS740 ARG741 ARG742 GLY743 LEU744 GLY745 LEU746 VAL747 ARG748 PHE749 ILE750 GLY751 PHE752 LEU753 TYR754 ARG755 LEU756 ASN757 LEU758 LEU759 THR760 GLY761 LYS762 MET763 MET764 PHE765 GLU766 CYS767 PHE768 ARG769 ARG770 LEU771 MET772 LYS773 ASP774 LEU775 THR776 ASP777 SER778 PRO779 SER780 GLU781 GLU782 THR783 LEU784 GLU785 SER786 VAL787 VAL788 GLU789 LEU790 LEU791 ASN792 THR793 VAL794 GLY795 GLU796 GLN797 PHE798 GLU799 THR800 ASP801 SER802 GLU811 GLY812 SER813 GLN814 LEU815 LEU816 ASP817 SER818 LEU819 PHE820 GLY821 ILE822 LEU823 ASP824 ASN825 ILE826 ILE827 GLN828 THR829 ALA830 LYS831 ILE832 SER833 SER834 ARG835 ILE836 LYS837 PHE838 LYS839 LEU840 ILE841 ASP842 ILE843 LYS844 GLU845 LEU846 ARG847 HIS848 ASP849 LYS850 ASN851 TRP852 ASN853
Unit 4 ASN577 ARG578 TRP579 VAL580 PRO581 LYS582 LYS597 THR598 GLU599 LEU600 LEU601 ASP602 LYS603 ASP604 GLU605 VAL606 GLU607 ARG608 LYS609 MET610 LYS611 SER612 LEU613 LEU614 ASN615 LYS616 LEU617 THR618 LEU619 GLU620 MET621 PHE622 ASP623 ALA624 ILE625 SER626 SER627 GLU628 ILE629 LEU630 ALA631 ILE632 ALA633 ASN634 ILE635 SER636 VAL637 TRP638 GLU639 THR640 ASN641 GLY642 GLU643 THR644 LEU645 LYS646 ALA647 VAL648 ILE649 GLU650 GLN651 ILE652 PHE653 LEU654 LYS655 ALA656 CYS657 ASP658 GLU659 PRO660 HIS661 TRP662 SER663 SER664 MET665 TYR666 ALA667 GLN668 LEU669 CYS670 GLY671 LYS672 VAL673 VAL674 LYS675 GLU676 LEU677 ASN678 PRO679 ASP680 ILE681 THR682 ASP683 GLU684 THR685 LYS689 THR690 GLY691 PRO692 LYS693 LEU694 VAL695 LEU696 HIS697 TYR698 LEU699 VAL700 ALA701 ARG702 CYS703 HIS704 ALA705 GLU706 PHE707 ASP708 LYS709 GLY710 TRP711 THR712 ASP713 LYS714 LEU715 PRO716 SER730 GLU731 GLU732 TYR733 TYR734 ALA735 ALA736 ALA737 SER738 ALA739 LYS740 ARG741 ARG742 GLY743 LEU744 GLY745 LEU746 VAL747 ARG748 PHE749 ILE750 GLY751 PHE752 LEU753 TYR754 ARG755 LEU756 ASN757 LEU758 LEU759 THR760 GLY761 LYS762 MET763 MET764 PHE765 GLU766 CYS767 PHE768 ARG769 ARG770 LEU771 MET772 LYS773 ASP774 LEU775 THR776 ASP777 SER778 PRO779 SER780 GLU781 GLU782 THR783 LEU784 GLU785 SER786 VAL787 VAL788 GLU789 LEU790 LEU791 ASN792 THR793 VAL794 GLY795 GLU796 GLN797 PHE798 GLU799 THR800 ASP801 SER802 GLY812 SER813 GLN814 LEU815 LEU816 ASP817 SER818 LEU819 PHE820 GLY821 ILE822 LEU823 ASP824 ASN825 ILE826 ILE827 GLN828 THR829 ALA830 LYS831 ILE832 SER833 SER834 ARG835 ILE836 LYS837 PHE838 LYS839 LEU840 ILE841 ASP842 ILE843 LYS844 GLU845 LEU846 ARG847 HIS848 ASP849 LYS850 ASN851 TRP852

Ligands
Unit 5 AMP1394
Unit 6 AMP1394

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany