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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE CAP-BINDING DOMAIN OF INFLUENZA VIRUS POLYMERASE SUBUNIT PB2 WITH BOUND M7GTP
Keywords RNA-DEPENDENT RNA POLYMERASE, TRANSCRIPTION, PB2 SUBUNIT, INFLUENZA VIRUS, CAP-BINDING DOMAIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2VQZ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLYMERASE BASIC PROTEIN 2  A 164 1216 81
2  Protein   POLYMERASE BASIC PROTEIN 2  B 162 1197 81
3  Protein   POLYMERASE BASIC PROTEIN 2  D 165 1224 81
4  Protein   POLYMERASE BASIC PROTEIN 2  E 160 1183 81
5  Protein   POLYMERASE BASIC PROTEIN 2  F 160 1188 81
6  Ligand   POLYMERASE BASIC PROTEIN 2  A 1 0 33
7  Ligand   POLYMERASE BASIC PROTEIN 2  B 1 0 33
8  Ligand   POLYMERASE BASIC PROTEIN 2  D 1 0 33
9  Ligand   POLYMERASE BASIC PROTEIN 2  E 1 0 33
10  Ligand   POLYMERASE BASIC PROTEIN 2  F 1 0 33
11 Water     272 0 272
total       1088 6008 842
Proteins
Unit 1 SER320 SER321 SER322 PHE323 SER324 PHE325 GLY326 GLY327 PHE328 THR329 PHE330 LYS331 ARG332 THR333 SER334 GLY335 SER336 SER337 ILE338 LYS339 ARG340 GLU341 GLU342 GLU343 VAL344 LEU345 THR346 GLY347 ASN348 LEU349 GLN350 THR351 LEU352 LYS353 ILE354 ARG355 VAL356 HIS357 GLU358 GLY359 TYR360 GLU361 GLU362 PHE363 THR364 MSE365 VAL366 GLY367 LYS368 ARG369 ALA370 THR371 ALA372 ILE373 LEU374 ARG375 LYS376 ALA377 THR378 ARG379 ARG380 LEU381 VAL382 GLN383 LEU384 ILE385 VAL386 SER387 GLY388 LYS389 ASP390 GLU391 GLN392 SER393 ILE394 ALA395 GLU396 ALA397 ILE398 ILE399 VAL400 ALA401 MSE402 VAL403 PHE404 SER405 GLN406 GLU407 ASP408 CYS409 MSE410 ILE411 LYS412 ALA413 VAL414 ARG415 GLY416 ASP417 LEU418 ASN419 PHE420 VAL421 ASN422 ARG423 ALA424 ASN425 GLN426 ARG427 LEU428 ASN429 PRO430 MSE431 HIS432 GLN433 LEU434 LEU435 ARG436 HIS437 PHE438 GLN439 LYS440 ASP441 ALA442 LYS443 VAL444 LEU445 PHE446 GLN447 ASN448 TRP449 GLY450 ILE451 GLU452 HIS453 ILE454 ASP455 ASN456 VAL457 MSE458 GLY459 MSE460 VAL461 GLY462 VAL463 LEU464 PRO465 ASP466 MSE467 THR468 PRO469 SER470 THR471 GLU472 MSE473 SER474 MSE475 ARG476 GLY477 ILE478 ARG479 VAL480 SER481 LYS482 MSE483
Unit 2 SER320 SER321 SER322 PHE323 SER324 PHE325 GLY326 GLY327 PHE328 THR329 PHE330 LYS331 ARG332 THR333 SER334 GLY335 SER336 SER337 ILE338 LYS339 ARG340 GLU341 GLU342 GLU343 VAL344 LEU345 THR346 GLY347 ASN348 LEU349 GLN350 THR351 LEU352 LYS353 ILE354 ARG355 VAL356 HIS357 GLU358 GLY359 TYR360 GLU361 GLU362 PHE363 THR364 MSE365 VAL366 GLY367 LYS368 ARG369 ALA370 THR371 ALA372 ILE373 LEU374 ARG375 LYS376 ALA377 THR378 ARG379 ARG380 LEU381 VAL382 GLN383 LEU384 ILE385 VAL386 SER387 GLY388 LYS389 ASP390 GLU391 GLN392 SER393 ILE394 ALA395 GLU396 ALA397 ILE398 ILE399 VAL400 ALA401 MSE402 VAL403 PHE404 SER405 GLN406 GLU407 ASP408 CYS409 MSE410 ILE411 LYS412 ALA413 VAL414 ARG415 GLY416 ASP417 LEU418 ASN419 PHE420 VAL421 ALA424 ASN425 GLN426 ARG427 LEU428 ASN429 PRO430 MSE431 HIS432 GLN433 LEU434 LEU435 ARG436 HIS437 PHE438 GLN439 LYS440 ASP441 ALA442 LYS443 VAL444 LEU445 PHE446 GLN447 ASN448 TRP449 GLY450 ILE451 GLU452 HIS453 ILE454 ASP455 ASN456 VAL457 MSE458 GLY459 MSE460 VAL461 GLY462 VAL463 LEU464 PRO465 ASP466 MSE467 THR468 PRO469 SER470 THR471 GLU472 MSE473 SER474 MSE475 ARG476 GLY477 ILE478 ARG479 VAL480 SER481 LYS482 MSE483
Unit 3 ILE319 SER320 SER321 SER322 PHE323 SER324 PHE325 GLY326 GLY327 PHE328 THR329 PHE330 LYS331 ARG332 THR333 SER334 GLY335 SER336 SER337 ILE338 LYS339 ARG340 GLU341 GLU342 GLU343 VAL344 LEU345 THR346 GLY347 ASN348 LEU349 GLN350 THR351 LEU352 LYS353 ILE354 ARG355 VAL356 HIS357 GLU358 GLY359 TYR360 GLU361 GLU362 PHE363 THR364 MSE365 VAL366 GLY367 LYS368 ARG369 ALA370 THR371 ALA372 ILE373 LEU374 ARG375 LYS376 ALA377 THR378 ARG379 ARG380 LEU381 VAL382 GLN383 LEU384 ILE385 VAL386 SER387 GLY388 LYS389 ASP390 GLU391 GLN392 SER393 ILE394 ALA395 GLU396 ALA397 ILE398 ILE399 VAL400 ALA401 MSE402 VAL403 PHE404 SER405 GLN406 GLU407 ASP408 CYS409 MSE410 ILE411 LYS412 ALA413 VAL414 ARG415 GLY416 ASP417 LEU418 ASN419 PHE420 VAL421 ASN422 ARG423 ALA424 ASN425 GLN426 ARG427 LEU428 ASN429 PRO430 MSE431 HIS432 GLN433 LEU434 LEU435 ARG436 HIS437 PHE438 GLN439 LYS440 ASP441 ALA442 LYS443 VAL444 LEU445 PHE446 GLN447 ASN448 TRP449 GLY450 ILE451 GLU452 HIS453 ILE454 ASP455 ASN456 VAL457 MSE458 GLY459 MSE460 VAL461 GLY462 VAL463 LEU464 PRO465 ASP466 MSE467 THR468 PRO469 SER470 THR471 GLU472 MSE473 SER474 MSE475 ARG476 GLY477 ILE478 ARG479 VAL480 SER481 LYS482 MSE483
Unit 4 SER320 SER321 SER322 PHE323 SER324 PHE325 GLY326 GLY327 PHE328 THR329 PHE330 LYS331 ARG332 THR333 SER334 GLY335 SER336 SER337 ILE338 LYS339 ARG340 GLU341 GLU342 GLU343 VAL344 LEU345 THR346 GLY347 ASN348 LEU349 GLN350 THR351 LEU352 LYS353 ILE354 ARG355 VAL356 HIS357 GLU358 GLY359 TYR360 GLU361 GLU362 PHE363 THR364 MSE365 VAL366 GLY367 LYS368 ARG369 ALA370 THR371 ALA372 ILE373 LEU374 ARG375 LYS376 ALA377 THR378 ARG379 ARG380 LEU381 VAL382 GLN383 LEU384 ILE385 VAL386 SER387 GLY388 LYS389 ASP390 GLU391 GLN392 SER393 ILE394 ALA395 GLU396 ALA397 ILE398 ILE399 VAL400 ALA401 MSE402 VAL403 PHE404 SER405 GLN406 GLU407 ASP408 CYS409 MSE410 ILE411 LYS412 ALA413 VAL414 ARG415 GLY416 ASP417 LEU418 ASN419 PHE420 VAL421 ASN422 ARG427 LEU428 ASN429 PRO430 MSE431 HIS432 GLN433 LEU434 LEU435 ARG436 HIS437 PHE438 GLN439 LYS440 ASP441 ALA442 LYS443 VAL444 LEU445 PHE446 GLN447 ASN448 TRP449 GLY450 ILE451 GLU452 HIS453 ILE454 ASP455 ASN456 VAL457 MSE458 GLY459 MSE460 VAL461 GLY462 VAL463 LEU464 PRO465 ASP466 MSE467 THR468 PRO469 SER470 THR471 GLU472 MSE473 SER474 MSE475 ARG476 GLY477 ILE478 ARG479 VAL480 SER481 LYS482 MSE483
Unit 5 SER322 PHE323 SER324 PHE325 GLY326 GLY327 PHE328 THR329 PHE330 LYS331 ARG332 THR333 SER334 GLY335 SER336 SER337 ILE338 LYS339 ARG340 GLU341 GLU342 GLU343 VAL344 LEU345 THR346 GLY347 ASN348 LEU349 GLN350 THR351 LEU352 LYS353 ILE354 ARG355 VAL356 HIS357 GLU358 GLY359 TYR360 GLU361 GLU362 PHE363 THR364 MSE365 VAL366 GLY367 LYS368 ARG369 ALA370 THR371 ALA372 ILE373 LEU374 ARG375 LYS376 ALA377 THR378 ARG379 ARG380 LEU381 VAL382 GLN383 LEU384 ILE385 VAL386 SER387 GLY388 LYS389 ASP390 GLU391 GLN392 SER393 ILE394 ALA395 GLU396 ALA397 ILE398 ILE399 VAL400 ALA401 MSE402 VAL403 PHE404 SER405 GLN406 GLU407 ASP408 CYS409 MSE410 ILE411 LYS412 ALA413 VAL414 ARG415 GLY416 ASP417 LEU418 ASN419 PHE420 VAL421 ASN422 ASN425 GLN426 ARG427 LEU428 ASN429 PRO430 MSE431 HIS432 GLN433 LEU434 LEU435 ARG436 HIS437 PHE438 GLN439 LYS440 ASP441 ALA442 LYS443 VAL444 LEU445 PHE446 GLN447 ASN448 TRP449 GLY450 ILE451 GLU452 HIS453 ILE454 ASP455 ASN456 VAL457 MSE458 GLY459 MSE460 VAL461 GLY462 VAL463 LEU464 PRO465 ASP466 MSE467 THR468 PRO469 SER470 THR471 GLU472 MSE473 SER474 MSE475 ARG476 GLY477 ILE478 ARG479 VAL480 SER481 LYS482 MSE483
Ligands
Unit 6 MGT1483
Unit 7 MGT1483
Unit 8 MGT1483
Unit 9 MGT1483
Unit 10 MGT1483
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany