2VQM - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF HDAC4 CATALYTIC DOMAIN BOUND TO A HYDROXAMIC ACID INHBITOR
• Keywords: INHIBITOR, REPRESSOR, CHROMATIN, COILED COIL, HISTONE DEACETYLASE, TRANSCRIPTION REGULATION, UBL CONJUGATION, CHROMATIN REGULATOR, POLYMORPHISM, TRANSCRIPTION, PHOSPHOPROTEIN, HDAC, ZINC, HDACI, NUCLEUS, HYDROLASE, CYTOPLASM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VQM	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HISTONE DEACETYLASE 4	A	391	2940	0
2	Ligand	HISTONE DEACETYLASE 4	A	5	0	30
3	Water			360	0	360
total				756	2940	390

Proteins

Unit 1

PRO 6 ARG 7 PHE 8 THR 9 THR 10 GLY 11 LEU 12 VAL 13 TYR 14 ASP 15 THR 16 LEU 17 MET 18 LEU 19 LYS 20 HIS 21 GLN 22 CYS 23 THR 24 CYS 25 GLY 26 HIS 34 ALA 35 GLY 36 ARG 37 ILE 38 GLN 39 SER 40 ILE 41 TRP 42 SER 43 ARG 44 LEU 45 GLN 46 GLU 47 THR 48 GLY 49 LEU 50 ARG 51 GLY 52 LYS 53 CYS 54 GLU 55 CYS 56 ILE 57 ARG 58 GLY 59 ARG 60 LYS 61 ALA 62 THR 63 LEU 64 GLU 65 GLU 66 LEU 67 GLN 68 THR 69 VAL 70 HIS 71 SER 72 GLU 73 ALA 74 HIS 75 THR 76 LEU 77 LEU 78 TYR 79 GLY 80 THR 81 ASN 82 PRO 83 LEU 84 ASN 85 ARG 86 GLN 87 LYS 92 LYS 93 LEU 94 LEU 95 GLY 96 SER 97 LEU 98 ALA 99 SER 100 VAL 101 PHE 102 VAL 103 ARG 104 LEU 105 PRO 106 CYS 107 GLY 108 GLY 109 VAL 110 GLY 111 VAL 112 ASP 113 SER 114 ASP 115 THR 116 ILE 117 TRP 118 ASN 119 GLU 120 VAL 121 HIS 122 SER 123 ALA 124 GLY 125 ALA 126 ALA 127 ARG 128 LEU 129 ALA 130 VAL 131 GLY 132 CYS 133 VAL 134 VAL 135 GLU 136 LEU 137 VAL 138 PHE 139 LYS 140 VAL 141 ALA 142 THR 143 GLY 144 GLU 145 LEU 146 LYS 147 ASN 148 GLY 149 PHE 150 ALA 151 VAL 152 VAL 153 ARG 154 PRO 155 PRO 156 GLY 157 HIS 158 HIS 159 ALA 160 GLU 161 GLU 162 SER 163 THR 164 PRO 165 MET 166 GLY 167 PHE 168 CYS 169 TYR 170 PHE 171 ASN 172 SER 173 VAL 174 ALA 175 VAL 176 ALA 177 ALA 178 LYS 179 LEU 180 LEU 181 GLN 182 GLN 183 ARG 184 LEU 185 SER 186 VAL 187 SER 188 LYS 189 ILE 190 LEU 191 ILE 192 VAL 193 ASP 194 TRP 195 ASP 196 VAL 197 HIS 198 HIS 199 GLY 200 ASN 201 GLY 202 THR 203 GLN 204 GLN 205 ALA 206 PHE 207 TYR 208 SER 209 ASP 210 PRO 211 SER 212 VAL 213 LEU 214 TYR 215 MET 216 SER 217 LEU 218 HIS 219 ARG 220 TYR 221 ASP 222 ASP 223 GLY 224 ASN 225 PHE 226 PHE 227 PRO 228 GLY 229 SER 230 GLY 231 ALA 232 PRO 233 ASP 234 GLU 235 VAL 236 GLY 237 THR 238 GLY 239 PRO 240 GLY 241 VAL 242 GLY 243 PHE 244 ASN 245 VAL 246 ASN 247 MET 248 ALA 249 PHE 250 THR 251 GLY 252 GLY 253 LEU 254 ASP 255 PRO 256 PRO 257 MET 258 GLY 259 ASP 260 ALA 261 GLU 262 TYR 263 LEU 264 ALA 265 ALA 266 PHE 267 ARG 268 THR 269 VAL 270 VAL 271 MET 272 PRO 273 ILE 274 ALA 275 SER 276 GLU 277 PHE 278 ALA 279 PRO 280 ASP 281 VAL 282 VAL 283 LEU 284 VAL 285 SER 286 SER 287 GLY 288 PHE 289 ASP 290 ALA 291 VAL 292 GLU 293 GLY 294 HIS 295 PRO 296 THR 297 PRO 298 LEU 299 GLY 300 GLY 301 TYR 302 ASN 303 LEU 304 SER 305 ALA 306 ARG 307 CYS 308 PHE 309 GLY 310 TYR 311 LEU 312 THR 313 LYS 314 GLN 315 LEU 316 MET 317 GLY 318 LEU 319 ALA 320 GLY 321 GLY 322 ARG 323 ILE 324 VAL 325 LEU 326 ALA 327 LEU 328 GLU 329 GLY 330 GLY 331 HIS 332 ASP 333 LEU 334 THR 335 ALA 336 ILE 337 CYS 338 ASP 339 ALA 340 SER 341 GLU 342 ALA 343 CYS 344 VAL 345 SER 346 ALA 347 LEU 348 LEU 349 GLY 350 ASN 351 GLU 352 LEU 353 ASP 354 PRO 355 LEU 356 PRO 357 GLU 358 LYS 359 VAL 360 LEU 361 GLN 362 GLN 363 ARG 364 PRO 365 ASN 366 ALA 367 ASN 368 ALA 369 VAL 370 ARG 371 SER 372 MET 373 GLU 374 LYS 375 VAL 376 MET 377 GLU 378 ILE 379 HIS 380 SER 381 LYS 382 TYR 383 TRP 384 ARG 385 CYS 386 LEU 387 GLN 388 ARG 389 THR 390 THR 391 SER 392 THR 393 ALA 394 GLY 395 ARG 396 SER 397 LEU 398 ILE 399 GLU 400 ALA 401 GLN 402 THR 403 CYS 404 GLU 405 ASN 406 GLU 407

Ligands

Unit 2

K 1408 K 1409 HA3 1410 ZN 1411 ZN 1412