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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE P PILUS USHER (PAPC) TRANSLOCATION PORE
Keywords TRANSMEMBRANE, OUTER MEMBRANE, TRANSPORT, USHER, P PILUS, ME FIMBRIUM, OM TRANSLOCATION PORE, PILUS ASSEMBLY PLATFORM
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2VQI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   OUTER MEMBRANE USHER PROTEIN PAPC  A 477 3703 64
2  Protein   OUTER MEMBRANE USHER PROTEIN PAPC  B 477 3686 64
3  Ligand   OUTER MEMBRANE USHER PROTEIN PAPC  A 1 0 16
4  Ligand   OUTER MEMBRANE USHER PROTEIN PAPC  B 3 0 58
5 Water     34 0 34
total       992 7389 236
Proteins
Unit 1 LEU146 MSE147 LEU148 ASP149 TYR150 ASN151 LEU152 ASN153 GLY154 THR155 VAL156 SER157 ARG158 ASN159 TYR160 GLN161 GLY162 GLY163 ASP164 SER165 HIS166 GLN167 PHE168 SER169 TYR170 ASN171 GLY172 THR173 VAL174 GLY175 GLY176 ASN177 LEU178 PRO180 TRP181 ARG182 LEU183 ARG184 ALA185 ASP186 TYR187 GLN188 GLY189 SER190 GLN191 GLU192 GLN193 SER194 ARG195 TYR196 ASN197 GLY198 GLU199 LYS200 THR201 THR202 ASN203 ARG204 ASN205 PHE206 THR207 TRP208 SER209 ARG210 PHE211 TYR212 LEU213 PHE214 ARG215 ALA216 ILE217 PRO218 ARG219 TRP220 ARG221 ALA222 ASN223 LEU224 THR225 LEU226 GLY227 GLU228 ASN229 ASN230 ILE231 ASN232 SER233 ASP234 ILE235 PHE236 ARG237 SER238 TRP239 SER240 TYR241 THR242 GLY243 ALA244 SER245 LEU246 GLU247 SER248 MSE252 LEU253 PRO254 PRO255 ARG256 LEU257 ARG258 GLY259 TYR260 ALA261 PRO262 GLN263 ILE264 THR265 GLY266 ILE267 ALA268 GLU269 THR270 ASN271 ALA272 ARG273 VAL274 VAL275 VAL276 SER277 GLN278 GLN279 GLY280 ARG281 VAL282 LEU283 TYR284 ASP285 SER286 MSE287 VAL288 PRO289 ALA290 GLY291 PRO292 PHE293 SER294 ILE295 GLN296 ASP297 LEU298 ASP299 SER300 SER301 VAL302 ARG303 GLY304 ARG305 LEU306 ASP307 VAL308 GLU309 VAL310 ILE311 GLU312 GLN313 ASN314 GLY315 ARG316 LYS317 LYS318 THR319 PHE320 GLN321 VAL322 ASP323 THR324 ALA325 SER326 VAL327 PRO328 TYR329 LEU330 THR331 ARG332 PRO333 GLY334 GLN335 VAL336 ARG337 TYR338 LYS339 LEU340 VAL341 SER342 GLY343 ARG344 SER345 ARG346 GLY347 TYR348 GLU353 GLY354 PRO355 VAL356 PHE357 ALA358 THR359 GLY360 GLU361 ALA362 SER363 TRP364 GLY365 LEU366 SER367 ASN368 GLN369 TRP370 SER371 LEU372 TYR373 GLY374 GLY375 ALA376 VAL377 LEU378 ALA379 GLY380 ASP381 TYR382 ASN383 ALA384 LEU385 ALA386 ALA387 GLY388 ALA389 GLY390 TRP391 ASP392 LEU393 GLY394 VAL395 PRO396 GLY397 THR398 LEU399 SER400 ALA401 ASP402 ILE403 THR404 GLN405 SER406 VAL407 ALA408 ARG409 ILE410 GLU411 GLY412 GLU413 ARG414 THR415 PHE416 GLN417 GLY418 LYS419 SER420 TRP421 ARG422 LEU423 SER424 TYR425 SER426 LYS427 ARG428 PHE429 ASP430 ASP435 ILE436 THR437 PHE438 ALA439 GLY440 TYR441 ARG442 PHE443 SER444 GLU445 ARG446 ASN447 TYR448 MSE449 THR450 MSE451 GLU452 GLN453 TYR454 LEU455 ASN456 ALA457 ARG458 TYR459 ARG460 ASN461 ASP462 TYR463 SER464 SER465 ARG466 GLU467 LYS468 GLU469 MSE470 TYR471 THR472 VAL473 THR474 LEU475 ASN476 LYS477 ASN478 VAL479 ALA480 ASP481 TRP482 ASN483 THR484 SER485 PHE486 ASN487 LEU488 GLN489 TYR490 SER491 ARG492 GLN493 THR494 TYR495 TRP496 ASP497 ILE498 ARG499 LYS500 THR501 ASP502 TYR503 TYR504 THR505 VAL506 SER507 VAL508 ASN509 ARG510 TYR511 PHE512 ASN513 VAL514 PHE515 LEU517 GLN518 GLY519 VAL520 ALA521 VAL522 GLY523 LEU524 SER525 ALA526 SER527 ARG528 SER529 LYS530 TYR531 LEU532 GLY533 ARG534 ASP535 ASN536 ASP537 SER538 ALA539 TYR540 LEU541 ARG542 ILE543 SER544 VAL545 PRO546 LEU547 GLY548 THR549 GLY550 THR551 ALA552 SER553 TYR554 SER555 GLY556 SER557 MSE558 SER559 ASN560 ASP561 ARG562 TYR563 VAL564 ASN565 MSE566 ALA567 GLY568 TYR569 THR570 ASP571 THR572 PHE573 ASN574 ASP575 GLY576 LEU577 ASP578 SER579 TYR580 SER581 LEU582 ASN583 ALA584 GLY585 LEU586 ASN587 SER588 GLY589 LEU592 THR593 SER594 GLN595 ARG596 GLN597 ILE598 ASN599 ALA600 TYR601 TYR602 SER603 HIS604 ARG605 SER606 PRO607 LEU608 ALA609 ASN610 LEU611 SER612 ALA613 ASN614 ILE615 ALA616 SER617 LEU618 GLN619 LYS620 GLY621 TYR622 THR623 SER624 PHE625 GLY626 VAL627 SER628 ALA629 SER630 GLY631 GLY632 ALA633 THR634 ILE635 THR636 GLY637
Unit 2 LEU146 MSE147 LEU148 ASP149 TYR150 ASN151 LEU152 ASN153 GLY154 THR155 VAL156 SER157 ARG158 ASN159 TYR160 GLN161 GLY162 GLY163 ASP164 SER165 HIS166 GLN167 PHE168 SER169 TYR170 ASN171 GLY172 THR173 VAL174 GLY175 GLY176 ASN177 LEU178 GLY179 PRO180 TRP181 ARG182 LEU183 ARG184 ALA185 ASP186 TYR187 GLN188 GLY189 SER190 GLN191 GLU192 GLN193 SER194 ARG195 TYR196 ASN197 GLY198 GLU199 LYS200 THR201 THR202 ASN203 ARG204 ASN205 PHE206 THR207 TRP208 SER209 ARG210 PHE211 TYR212 LEU213 PHE214 ARG215 ALA216 ILE217 PRO218 ARG219 TRP220 ARG221 ALA222 ASN223 LEU224 THR225 LEU226 GLY227 GLU228 ASN229 ASN230 ILE231 ASN232 SER233 ASP234 ILE235 PHE236 ARG237 SER238 TRP239 SER240 TYR241 THR242 GLY243 ALA244 SER245 LEU246 GLU247 SER248 MSE252 LEU253 PRO254 PRO255 ARG256 LEU257 ARG258 GLY259 TYR260 ALA261 PRO262 GLN263 ILE264 THR265 GLY266 ILE267 ALA268 GLU269 THR270 ASN271 ALA272 ARG273 VAL274 VAL275 VAL276 SER277 GLN278 GLN279 GLY280 ARG281 VAL282 LEU283 TYR284 ASP285 SER286 MSE287 VAL288 PRO289 ALA290 GLY291 PRO292 PHE293 SER294 ILE295 GLN296 ASP297 LEU298 ASP299 SER300 SER301 VAL302 ARG303 GLY304 ARG305 LEU306 ASP307 VAL308 GLU309 VAL310 ILE311 GLU312 GLN313 ASN314 GLY315 ARG316 LYS317 LYS318 THR319 PHE320 GLN321 VAL322 ASP323 THR324 ALA325 SER326 VAL327 PRO328 TYR329 LEU330 THR331 ARG332 PRO333 GLY334 GLN335 VAL336 ARG337 TYR338 LYS339 LEU340 VAL341 SER342 GLY343 ARG344 SER345 ARG346 GLY347 TYR348 GLY349 GLY354 PRO355 VAL356 PHE357 ALA358 THR359 GLY360 GLU361 ALA362 SER363 TRP364 GLY365 LEU366 SER367 ASN368 GLN369 TRP370 SER371 LEU372 TYR373 GLY374 GLY375 ALA376 VAL377 LEU378 ALA379 GLY380 ASP381 TYR382 ASN383 ALA384 LEU385 ALA386 ALA387 GLY388 ALA389 GLY390 TRP391 ASP392 LEU393 GLY394 VAL395 PRO396 GLY397 THR398 LEU399 SER400 ALA401 ASP402 ILE403 THR404 GLN405 SER406 VAL407 ALA408 ARG409 ILE410 GLU411 GLY412 GLU413 ARG414 THR415 PHE416 GLN417 GLY418 LYS419 SER420 TRP421 ARG422 LEU423 SER424 TYR425 SER426 LYS427 ARG428 PHE429 ALA434 ASP435 ILE436 THR437 PHE438 ALA439 GLY440 TYR441 ARG442 PHE443 SER444 GLU445 ARG446 ASN447 TYR448 MSE449 THR450 MSE451 GLU452 GLN453 TYR454 LEU455 ASN456 ALA457 ARG458 TYR459 ARG460 ASN461 ASP462 TYR463 SER464 SER465 ARG466 GLU467 LYS468 GLU469 MSE470 TYR471 THR472 VAL473 THR474 LEU475 ASN476 LYS477 ASN478 VAL479 ALA480 ASP481 TRP482 ASN483 THR484 SER485 PHE486 ASN487 LEU488 GLN489 TYR490 SER491 ARG492 GLN493 THR494 TYR495 TRP496 ASP497 ILE498 ARG499 LYS500 THR501 ASP502 TYR503 TYR504 THR505 VAL506 SER507 VAL508 ASN509 ARG510 TYR511 PHE512 ASN513 VAL514 PHE515 GLY519 VAL520 ALA521 VAL522 GLY523 LEU524 SER525 ALA526 SER527 ARG528 SER529 LYS530 TYR531 LEU532 GLY533 ARG534 ASP535 ASN536 ASP537 SER538 ALA539 TYR540 LEU541 ARG542 ILE543 SER544 VAL545 PRO546 LEU547 GLY548 THR549 GLY550 THR551 ALA552 SER553 TYR554 SER555 GLY556 SER557 MSE558 SER559 ASN560 ASP561 ARG562 TYR563 VAL564 ASN565 MSE566 ALA567 GLY568 TYR569 THR570 ASP571 THR572 PHE573 ASN574 ASP575 GLY576 LEU577 ASP578 SER579 TYR580 SER581 LEU582 ASN583 ALA584 GLY585 LEU586 ASN587 SER588 GLY589 GLY590 GLY591 LEU592 THR593 SER594 GLN595 ARG596 GLN597 ILE598 ASN599 ALA600 TYR601 TYR602 SER603 HIS604 ARG605 SER606 PRO607 LEU608 ALA609 ASN610 LEU611 SER612 ALA613 ASN614 ILE615 ALA616 SER617 LEU618 GLN619 LYS620 GLY621 TYR622 THR623 SER624 PHE625 GLY626 VAL627 SER628 ALA629 SER630 GLY631 GLY632 ALA633 THR634 ILE635 THR636
Ligands
Unit 3 LDA1638
Unit 4 C8E1637 C8E1638 LDA1639
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany