2VPL - Sequence, Chains, Asymmetric and Biological Units

• Title: THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNA
• Keywords: RIBOSOMAL PROTEIN, RNA-PROTEIN COMPLEX, TRANSLATION REGULATI TRANSLATION, REPRESSOR, RNA-BINDING, TRNA-BINDING, RRNA-BIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2VPL	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	50S RIBOSOMAL PROTEIN L1	A	137	1070	0
2	RNA		B	48	1031	0
3	Protein	50S RIBOSOMAL PROTEIN L1	C	137	1070	0
4	RNA		D	46	989	0
5	Ligand	50S RIBOSOMAL PROTEIN L1	A	1	0	1
6	Ligand	50S RIBOSOMAL PROTEIN L1	C	1	0	1
7	Water			318	0	318
total				688	4160	320

Proteins

Unit 1

PRO 1 LYS 2 HIS 3 GLY 4 LYS 5 ARG 6 TYR 7 ARG 8 ALA 9 LEU 10 LEU 11 GLU 12 LYS 13 VAL 14 ASP 15 PRO 16 ASN 17 LYS 18 ILE 19 TYR 20 THR 21 ILE 22 ASP 23 GLU 24 ALA 25 ALA 26 HIS 27 LEU 28 VAL 29 LYS 30 GLU 31 LEU 32 ALA 33 THR 34 ALA 35 LYS 36 PHE 37 ASP 38 GLU 39 THR 40 VAL 41 GLU 42 VAL 43 HIS 44 ALA 45 LYS 46 LEU 47 GLY 48 ILE 49 ASP 50 PRO 51 ARG 52 ARG 53 SER 54 ASP 55 GLN 56 ASN 57 VAL 58 ARG 59 GLY 60 THR 61 VAL 62 SER 63 LEU 64 PRO 65 HIS 66 GLY 67 GLY 159 ARG 160 ILE 161 GLU 162 PHE 163 ARG 164 ASN 165 ASP 166 LYS 167 THR 168 GLY 169 ALA 170 ILE 171 HIS 172 ALA 173 PRO 174 VAL 175 GLY 176 LYS 177 ALA 178 SER 179 PHE 180 PRO 181 PRO 182 GLU 183 LYS 184 LEU 185 ALA 186 ASP 187 ASN 188 ILE 189 ARG 190 ALA 191 PHE 192 ILE 193 ARG 194 ALA 195 LEU 196 GLU 197 ALA 198 HIS 199 LYS 200 PRO 201 GLU 202 GLY 203 ALA 204 LYS 205 GLY 206 THR 207 PHE 208 LEU 209 ARG 210 SER 211 VAL 212 TYR 213 VAL 214 THR 215 THR 216 THR 217 MET 218 GLY 219 PRO 220 SER 221 VAL 222 ARG 223 ILE 224 ASN 225 PRO 226 HIS 227 SER 228

Unit 3

PRO 1 LYS 2 HIS 3 GLY 4 LYS 5 ARG 6 TYR 7 ARG 8 ALA 9 LEU 10 LEU 11 GLU 12 LYS 13 VAL 14 ASP 15 PRO 16 ASN 17 LYS 18 ILE 19 TYR 20 THR 21 ILE 22 ASP 23 GLU 24 ALA 25 ALA 26 HIS 27 LEU 28 VAL 29 LYS 30 GLU 31 LEU 32 ALA 33 THR 34 ALA 35 LYS 36 PHE 37 ASP 38 GLU 39 THR 40 VAL 41 GLU 42 VAL 43 HIS 44 ALA 45 LYS 46 LEU 47 GLY 48 ILE 49 ASP 50 PRO 51 ARG 52 ARG 53 SER 54 ASP 55 GLN 56 ASN 57 VAL 58 ARG 59 GLY 60 THR 61 VAL 62 SER 63 LEU 64 PRO 65 HIS 66 GLY 67 GLY 159 ARG 160 ILE 161 GLU 162 PHE 163 ARG 164 ASN 165 ASP 166 LYS 167 THR 168 GLY 169 ALA 170 ILE 171 HIS 172 ALA 173 PRO 174 VAL 175 GLY 176 LYS 177 ALA 178 SER 179 PHE 180 PRO 181 PRO 182 GLU 183 LYS 184 LEU 185 ALA 186 ASP 187 ASN 188 ILE 189 ARG 190 ALA 191 PHE 192 ILE 193 ARG 194 ALA 195 LEU 196 GLU 197 ALA 198 HIS 199 LYS 200 PRO 201 GLU 202 GLY 203 ALA 204 LYS 205 GLY 206 THR 207 PHE 208 LEU 209 ARG 210 SER 211 VAL 212 TYR 213 VAL 214 THR 215 THR 216 THR 217 MET 218 GLY 219 PRO 220 SER 221 VAL 222 ARG 223 ILE 224 ASN 225 PRO 226 HIS 227 SER 228

Nucleic acids

Unit 2	G 2 G 3 A 4 G 5 U 6 G 7 A 8 A 9 G 10 G 11 A 12 G 13 G 14 C 15 U 16 C 17 G 18 C 19 G 20 A 21 A 22 C 23 U 24 C 25 G 26 C 27 G 28 A 29 A 30 G 31 C 32 C 33 G 34 A 35 G 36 A 37 A 38 A 39 C 40 U 41 U 42 C 43 A 44 C 45 U 46 C 47 C 48 C 49
Unit 4	G 2 G 3 A 4 G 5 U 6 G 7 A 8 A 9 G 10 G 11 A 12 G 13 G 14 C 15 U 16 C 17 G 18 C 19 G 20 A 21 U 24 C 25 G 26 C 27 G 28 A 29 A 30 G 31 C 32 C 33 G 34 A 35 G 36 A 37 A 38 A 39 C 40 U 41 U 42 C 43 A 44 C 45 U 46 C 47 C 48 C 49

Ligands

Unit 5	K 1229
Unit 6	K 1229