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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE CYLD USP DOMAIN
Keywords CYTOKINE SIGNALLING, LINKAGE SPECIFICITY, DEUBIQUITINATING ENZYME, LYS63- LINKED, ANTI-ONCOGENE, THIOL PROTEASE, CELL SIGNALLING, PHOSPHORYLATION, ZN-BINDING DOMAIN, UBIQUITIN, CELL CYCLE, USP DOMAIN, CROSS-BRACE, NF-KB, B-BOX, PROTEASE, HYDROLASE, CYTOPLASM, ALTERNATIVE SPLICING, UBL CONJUGATION PATHWAY
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2VHF     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UBIQUITIN CARBOXYL-TERMINAL HYDROLASE CYLD  A 341 2653 0
2  Protein   UBIQUITIN CARBOXYL-TERMINAL HYDROLASE CYLD  B 334 2594 0
3  Ligand   UBIQUITIN CARBOXYL-TERMINAL HYDROLASE CYLD  A 2 0 2
4  Ligand   UBIQUITIN CARBOXYL-TERMINAL HYDROLASE CYLD  B 2 0 2
5 Water     14 0 14
total       693 5247 18
Proteins
Unit 1 GLY583 LEU584 GLU585 ILE586 MET587 ILE588 GLY589 LYS590 LYS591 LYS592 GLY593 ILE594 GLN595 GLY596 HIS597 TYR598 ASN599 SER600 CYS601 TYR602 LEU603 ASP604 SER605 THR606 LEU607 PHE608 CYS609 LEU610 PHE611 ALA612 PHE613 SER614 SER615 VAL616 LEU617 ASP618 THR619 VAL620 LEU621 LEU622 ARG623 PRO624 LYS625 GLU626 LYS627 ASN628 ASP629 VAL630 GLU631 TYR632 TYR633 SER634 GLU635 THR636 GLN637 GLU638 LEU639 LEU640 ARG641 THR642 GLU643 ILE644 VAL645 ASN646 PRO647 LEU648 ARG649 ILE650 TYR651 GLY652 TYR653 VAL654 CYS655 ALA656 THR657 LYS658 ILE659 MET660 LYS661 LEU662 ARG663 LYS664 ILE665 LEU666 GLU667 LYS668 VAL669 GLU670 GLU679 LYS680 ASP681 PRO682 GLU683 GLU684 PHE685 LEU686 ASN687 ILE688 LEU689 PHE690 HIS691 HIS692 ILE693 LEU694 ARG695 VAL696 GLU697 PRO698 LEU699 LEU700 LYS701 ILE702 ARG703 SER704 ALA705 GLY706 GLN707 LYS708 VAL709 GLN710 ASP711 CYS712 TYR713 PHE714 TYR715 GLN716 ILE717 PHE718 MET719 GLU720 LYS721 ASN722 VAL725 GLY726 VAL727 PRO728 THR729 ILE730 GLN731 GLN732 LEU733 LEU734 GLU735 TRP736 SER737 PHE738 ILE739 ASN740 SER741 ASN742 LEU743 LYS744 PHE745 ALA746 GLU747 ALA748 PRO749 SER750 CYS751 LEU752 ILE753 ILE754 GLN755 MET756 PRO757 ARG758 PHE759 GLY760 LYS761 ASP762 PHE763 LYS764 LEU765 PHE766 LYS767 LYS768 ILE769 PHE770 PRO771 SER772 LEU773 GLU774 LEU775 ASN776 ILE777 THR778 ASP779 LEU780 LEU781 GLU782 ASP783 THR784 PRO785 ARG786 GLN787 CYS788 ARG789 ILE790 CYS791 GLY792 GLY793 LEU794 ALA795 MET796 TYR797 GLU798 CYS799 ARG800 GLU801 CYS802 TYR803 ASP804 ASP805 PRO806 ASP807 ILE808 SER809 ALA810 GLY811 LYS812 ILE813 LYS814 GLN815 PHE816 CYS817 LYS818 THR819 CYS820 ASN821 THR822 GLN823 VAL824 HIS825 LEU826 HIS827 PRO828 LYS829 ARG830 LEU831 ASN832 HIS833 LYS834 TYR835 ASN836 PRO837 VAL838 SER839 LEU840 GLN857 ASN858 MET859 GLU860 LEU861 PHE862 ALA863 VAL864 LEU865 CYS866 ILE867 GLU868 THR869 SER870 HIS871 TYR872 VAL873 ALA874 PHE875 VAL876 LYS877 TYR878 GLY879 LYS880 ASP881 ASP882 SER883 ALA884 TRP885 LEU886 PHE887 PHE888 ASP889 SER890 MET891 ALA892 GLY900 PHE901 ASN902 ILE903 PRO904 GLN905 VAL906 THR907 PRO908 CYS909 PRO910 GLU911 VAL912 GLY913 GLU914 TYR915 LEU916 LYS917 MET918 SER919 LEU920 GLU921 ASP922 LEU923 HIS924 SER925 LEU926 ASP927 SER928 ARG929 ARG930 ILE931 GLN932 GLY933 CYS934 ALA935 ARG936 ARG937 LEU938 LEU939 CYS940 ASP941 ALA942 TYR943 MET944 CYS945 MET946 TYR947 GLN948 SER949 PRO950 THR951 MET952 SER953 LEU954 TYR955 LYS956
Unit 2 GLY583 LEU584 GLU585 ILE586 MET587 ILE588 GLY589 LYS590 LYS591 LYS592 GLY593 ILE594 GLN595 GLY596 HIS597 TYR598 ASN599 SER600 CYS601 TYR602 LEU603 ASP604 SER605 THR606 LEU607 PHE608 CYS609 LEU610 PHE611 ALA612 PHE613 SER614 SER615 VAL616 LEU617 ASP618 THR619 VAL620 LEU621 LEU622 ARG623 PRO624 LYS625 GLU626 LYS627 ASN628 ASP629 VAL630 GLU631 TYR632 TYR633 SER634 GLU635 THR636 GLN637 GLU638 LEU639 LEU640 ARG641 THR642 GLU643 ILE644 VAL645 ASN646 PRO647 LEU648 ARG649 ILE650 TYR651 GLY652 TYR653 VAL654 CYS655 ALA656 THR657 LYS658 ILE659 MET660 LYS661 LEU662 ARG663 LYS664 ILE665 LEU666 GLU667 LYS668 VAL669 GLU670 ALA671 LYS680 ASP681 PRO682 GLU683 GLU684 PHE685 LEU686 ASN687 ILE688 LEU689 PHE690 HIS691 HIS692 ILE693 LEU694 ARG695 VAL696 GLU697 PRO698 LEU699 LEU700 LYS701 ILE702 ARG703 SER704 ALA705 GLY706 GLN707 LYS708 VAL709 GLN710 ASP711 CYS712 TYR713 PHE714 TYR715 GLN716 ILE717 PHE718 PRO728 THR729 ILE730 GLN731 GLN732 LEU733 LEU734 GLU735 TRP736 SER737 PHE738 ILE739 ASN740 SER741 ASN742 LEU743 LYS744 PHE745 ALA746 GLU747 ALA748 PRO749 SER750 CYS751 LEU752 ILE753 ILE754 GLN755 MET756 PRO757 ARG758 LYS767 LYS768 ILE769 PHE770 PRO771 SER772 LEU773 GLU774 LEU775 ASN776 ILE777 THR778 ASP779 LEU780 LEU781 GLU782 ASP783 THR784 PRO785 ARG786 GLN787 CYS788 ARG789 ILE790 CYS791 GLY792 GLY793 LEU794 ALA795 MET796 TYR797 GLU798 CYS799 ARG800 GLU801 CYS802 TYR803 ASP804 ASP805 PRO806 ASP807 ILE808 SER809 ALA810 GLY811 LYS812 ILE813 LYS814 GLN815 PHE816 CYS817 LYS818 THR819 CYS820 ASN821 THR822 GLN823 VAL824 HIS825 LEU826 HIS827 PRO828 LYS829 ARG830 LEU831 ASN832 HIS833 LYS834 TYR835 ASN836 PRO837 VAL838 SER839 LEU840 PRO841 LYS842 ASP843 LEU844 PRO845 ASP846 TRP847 ASP848 TRP849 ARG850 HIS851 GLY852 CYS853 ILE854 PRO855 CYS856 GLN857 ASN858 MET859 GLU860 LEU861 PHE862 ALA863 VAL864 LEU865 CYS866 ILE867 GLU868 THR869 SER870 HIS871 TYR872 VAL873 ALA874 PHE875 VAL876 LYS877 TYR878 GLY879 LYS880 ASP881 ASP882 SER883 ALA884 TRP885 LEU886 PHE887 PHE888 ASP889 SER890 MET891 ALA892 ASP893 ASN902 ILE903 PRO904 GLN905 VAL906 THR907 PRO908 CYS909 PRO910 GLU911 VAL912 GLY913 GLU914 TYR915 LEU916 LYS917 MET918 SER919 LEU920 GLU921 ASP922 LEU923 HIS924 SER925 LEU926 ASP927 SER928 ALA935 ARG936 ARG937 LEU938 LEU939 CYS940 ASP941 ALA942 TYR943 MET944 CYS945 MET946 TYR947 GLN948 SER949 PRO950 THR951 MET952 SER953 LEU954 TYR955
Ligands
Unit 3 ZN1957 ZN1958
Unit 4 ZN1956 ZN1957
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany