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Title | STRUCTURE OF THE WT-PHYCOERYTHROBILIN SYNTHASE PEBS FROM THE CYANOPHAGE P-SSM2 IN COMPLEX WITH THE BOUND SUBSTRATE BILIVERDIN IXA | |
Keywords | CYANOPHAGES, BILIVERDIN IXA, OXIDOREDUCTASE, PHYCOBILIN REDUCTASE, PHYCOBILIN SYNTHESIS, PROCHLOROCOCCUS, PHYCOERYTHROBILIN, BILIVERDIN REDUCTASE, FERREDOXIN DEPENDENT | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2VGR | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | CYANOBACTERIAL PHYCOERYTHROBILIN | A | 210 | 1738 | 0 |
2 | Protein | CYANOBACTERIAL PHYCOERYTHROBILIN | B | 211 | 1750 | 0 |
3 | Protein | CYANOBACTERIAL PHYCOERYTHROBILIN | C | 213 | 1760 | 0 |
4 | Protein | CYANOBACTERIAL PHYCOERYTHROBILIN | D | 213 | 1762 | 0 |
5 | Ligand | CYANOBACTERIAL PHYCOERYTHROBILIN | A | 1 | 0 | 43 |
6 | Ligand | CYANOBACTERIAL PHYCOERYTHROBILIN | B | 1 | 0 | 43 |
7 | Ligand | CYANOBACTERIAL PHYCOERYTHROBILIN | C | 1 | 0 | 43 |
8 | Ligand | CYANOBACTERIAL PHYCOERYTHROBILIN | D | 1 | 0 | 43 |
9 | Water | 339 | 0 | 339 | ||
total | 1190 | 7010 | 511 |
Unit 1 | LYS21 THR22 ILE23 TRP24 GLN25 ASN26 TYR27 ILE28 ASP29 ALA30 LEU31 PHE32 GLU33 THR34 PHE35 PRO36 GLN37 LEU38 GLU39 ILE40 SER41 GLU42 VAL43 TRP44 ALA45 LYS46 TRP47 ASP48 GLY49 GLY50 ASN51 VAL52 GLY56 GLY57 ASP58 ALA59 LYS60 LEU61 THR62 ALA63 ASN64 ILE65 ARG66 THR67 GLY68 GLU69 HIS70 PHE71 LEU72 LYS73 ALA74 ARG75 GLU76 ALA77 HIS78 ILE79 VAL80 ASP81 PRO82 ASN83 SER84 ASP85 ILE86 TYR87 ASN88 THR89 ILE90 LEU91 TYR92 PRO93 LYS94 THR95 GLY96 ALA97 ASP98 LEU99 PRO100 CYS101 PHE102 GLY103 MET104 ASP105 LEU106 MET107 LYS108 PHE109 SER110 ASP111 LYS112 LYS113 VAL114 ILE115 ILE116 VAL117 PHE118 ASP119 PHE120 GLN121 HIS122 PRO123 ARG124 GLU125 LYS126 TYR127 LEU128 PHE129 SER130 VAL131 ASP132 GLY133 LEU134 PRO135 GLU136 ASP137 ASP138 GLY139 LYS140 TYR141 ARG142 PHE143 PHE144 GLU145 MET146 GLY147 ASN148 HIS149 PHE150 SER151 LYS152 ASN153 ILE154 PHE155 VAL156 ARG157 TYR158 CYS159 LYS160 PRO161 ASP162 GLU163 VAL164 ASP165 GLN166 TYR167 LEU168 ASP169 THR170 PHE171 LYS172 LEU173 TYR174 LEU175 THR176 LYS177 TYR178 LYS179 GLU180 MET181 ILE182 ASP183 ASN184 ASN185 LYS186 PRO187 VAL188 GLY189 GLU190 ASP191 THR192 THR193 VAL194 TYR195 SER196 ASP197 PHE198 ASP199 THR200 TYR201 MET202 THR203 GLU204 LEU205 ASP206 PRO207 VAL208 ARG209 GLY210 TYR211 MET212 LYS213 ASN214 LYS215 PHE216 GLY217 GLU218 GLY219 ARG220 SER221 GLU222 ALA223 PHE224 VAL225 ASN226 ASP227 PHE228 LEU229 PHE230 SER231 TYR232 LYS233 |
Unit 2 | LYS21 THR22 ILE23 TRP24 GLN25 ASN26 TYR27 ILE28 ASP29 ALA30 LEU31 PHE32 GLU33 THR34 PHE35 PRO36 GLN37 LEU38 GLU39 ILE40 SER41 GLU42 VAL43 TRP44 ALA45 LYS46 TRP47 ASP48 GLY49 GLY50 ASN51 VAL52 THR53 LYS54 GLY57 ASP58 ALA59 LYS60 LEU61 THR62 ALA63 ASN64 ILE65 ARG66 THR67 GLY68 GLU69 HIS70 PHE71 LEU72 LYS73 ALA74 ARG75 GLU76 ALA77 HIS78 ILE79 VAL80 ASP81 PRO82 ASN83 SER84 ASP85 ILE86 TYR87 ASN88 THR89 ILE90 LEU91 TYR92 PRO93 LYS94 THR95 GLY96 ALA97 ASP98 LEU99 PRO100 CYS101 PHE102 GLY103 MET104 ASP105 LEU106 MET107 LYS108 PHE109 SER110 ASP111 LYS112 LYS113 VAL114 ILE115 ILE116 VAL117 PHE118 ASP119 PHE120 GLN121 HIS122 PRO123 ARG124 GLU125 LYS126 TYR127 LEU128 PHE129 SER130 VAL131 ASP132 GLY133 LEU134 PRO135 GLU136 ASP137 ASP138 GLY139 LYS140 TYR141 ARG142 PHE143 PHE144 GLU145 MET146 GLY147 ASN148 HIS149 PHE150 SER151 LYS152 ASN153 ILE154 PHE155 VAL156 ARG157 TYR158 CYS159 LYS160 PRO161 ASP162 GLU163 VAL164 ASP165 GLN166 TYR167 LEU168 ASP169 THR170 PHE171 LYS172 LEU173 TYR174 LEU175 THR176 LYS177 TYR178 LYS179 GLU180 MET181 ILE182 ASP183 ASN184 ASN185 LYS186 PRO187 VAL188 GLY189 GLU190 ASP191 THR192 THR193 VAL194 TYR195 SER196 ASP197 PHE198 ASP199 THR200 TYR201 MET202 THR203 GLU204 LEU205 ASP206 PRO207 VAL208 ARG209 GLY210 TYR211 MET212 LYS213 ASN214 LYS215 PHE216 GLY217 GLU218 GLY219 ARG220 SER221 GLU222 ALA223 PHE224 VAL225 ASN226 ASP227 PHE228 LEU229 PHE230 SER231 TYR232 LYS233 |
Unit 3 | LYS19 SER20 LYS21 THR22 ILE23 TRP24 GLN25 ASN26 TYR27 ILE28 ASP29 ALA30 LEU31 PHE32 GLU33 THR34 PHE35 PRO36 GLN37 LEU38 GLU39 ILE40 SER41 GLU42 VAL43 TRP44 ALA45 LYS46 TRP47 ASP48 GLY49 GLY50 ASN51 VAL52 THR53 GLY56 GLY57 ASP58 ALA59 LYS60 LEU61 THR62 ALA63 ASN64 ILE65 ARG66 THR67 GLY68 GLU69 HIS70 PHE71 LEU72 LYS73 ALA74 ARG75 GLU76 ALA77 HIS78 ILE79 VAL80 ASP81 PRO82 ASN83 SER84 ASP85 ILE86 TYR87 ASN88 THR89 ILE90 LEU91 TYR92 PRO93 LYS94 THR95 GLY96 ALA97 ASP98 LEU99 PRO100 CYS101 PHE102 GLY103 MET104 ASP105 LEU106 MET107 LYS108 PHE109 SER110 ASP111 LYS112 LYS113 VAL114 ILE115 ILE116 VAL117 PHE118 ASP119 PHE120 GLN121 HIS122 PRO123 ARG124 GLU125 LYS126 TYR127 LEU128 PHE129 SER130 VAL131 ASP132 GLY133 LEU134 PRO135 GLU136 ASP137 ASP138 GLY139 LYS140 TYR141 ARG142 PHE143 PHE144 GLU145 MET146 GLY147 ASN148 HIS149 PHE150 SER151 LYS152 ASN153 ILE154 PHE155 VAL156 ARG157 TYR158 CYS159 LYS160 PRO161 ASP162 GLU163 VAL164 ASP165 GLN166 TYR167 LEU168 ASP169 THR170 PHE171 LYS172 LEU173 TYR174 LEU175 THR176 LYS177 TYR178 LYS179 GLU180 MET181 ILE182 ASP183 ASN184 ASN185 LYS186 PRO187 VAL188 GLY189 GLU190 ASP191 THR192 THR193 VAL194 TYR195 SER196 ASP197 PHE198 ASP199 THR200 TYR201 MET202 THR203 GLU204 LEU205 ASP206 PRO207 VAL208 ARG209 GLY210 TYR211 MET212 LYS213 ASN214 LYS215 PHE216 GLY217 GLU218 GLY219 ARG220 SER221 GLU222 ALA223 PHE224 VAL225 ASN226 ASP227 PHE228 LEU229 PHE230 SER231 TYR232 LYS233 |
Unit 4 | LYS21 THR22 ILE23 TRP24 GLN25 ASN26 TYR27 ILE28 ASP29 ALA30 LEU31 PHE32 GLU33 THR34 PHE35 PRO36 GLN37 LEU38 GLU39 ILE40 SER41 GLU42 VAL43 TRP44 ALA45 LYS46 TRP47 ASP48 GLY49 GLY50 ASN51 VAL52 THR53 LYS54 ASP55 GLY56 GLY57 ASP58 ALA59 LYS60 LEU61 THR62 ALA63 ASN64 ILE65 ARG66 THR67 GLY68 GLU69 HIS70 PHE71 LEU72 LYS73 ALA74 ARG75 GLU76 ALA77 HIS78 ILE79 VAL80 ASP81 PRO82 ASN83 SER84 ASP85 ILE86 TYR87 ASN88 THR89 ILE90 LEU91 TYR92 PRO93 LYS94 THR95 GLY96 ALA97 ASP98 LEU99 PRO100 CYS101 PHE102 GLY103 MET104 ASP105 LEU106 MET107 LYS108 PHE109 SER110 ASP111 LYS112 LYS113 VAL114 ILE115 ILE116 VAL117 PHE118 ASP119 PHE120 GLN121 HIS122 PRO123 ARG124 GLU125 LYS126 TYR127 LEU128 PHE129 SER130 VAL131 ASP132 GLY133 LEU134 PRO135 GLU136 ASP137 ASP138 GLY139 LYS140 TYR141 ARG142 PHE143 PHE144 GLU145 MET146 GLY147 ASN148 HIS149 PHE150 SER151 LYS152 ASN153 ILE154 PHE155 VAL156 ARG157 TYR158 CYS159 LYS160 PRO161 ASP162 GLU163 VAL164 ASP165 GLN166 TYR167 LEU168 ASP169 THR170 PHE171 LYS172 LEU173 TYR174 LEU175 THR176 LYS177 TYR178 LYS179 GLU180 MET181 ILE182 ASP183 ASN184 ASN185 LYS186 PRO187 VAL188 GLY189 GLU190 ASP191 THR192 THR193 VAL194 TYR195 SER196 ASP197 PHE198 ASP199 THR200 TYR201 MET202 THR203 GLU204 LEU205 ASP206 PRO207 VAL208 ARG209 GLY210 TYR211 MET212 LYS213 ASN214 LYS215 PHE216 GLY217 GLU218 GLY219 ARG220 SER221 GLU222 ALA223 PHE224 VAL225 ASN226 ASP227 PHE228 LEU229 PHE230 SER231 TYR232 LYS233 |
Unit 5 | BLA1234 |
Unit 6 | BLA1234 |
Unit 7 | BLA1234 |
Unit 8 | BLA1234 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |