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Sequence, Chains, Asymmetric and Biological Units

Title AP2 CLATHRIN ADAPTOR CORE
Keywords CYTOPLASMIC VESICLE, ALTERNATIVE SPLICING, ENDOCYTOSIS, LIPI BINDING, GOLGI APPARATUS, ADAPTOR, MEMBRANE, TRANSPORT, COA PHOSPHORYLATION, PROTEIN TRANSPORT
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2VGL     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT  A 600 4737 0
2  Protein   AP-2 COMPLEX SUBUNIT BETA-1  B 579 4578 0
3  Protein   AP-2 COMPLEX SUBUNIT MU-1  M 396 3192 0
4  Protein   AP-2 COMPLEX SUBUNIT SIGMA-1  S 142 1200 0
5  Ligand   ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT  A 1 0 36
6 Water     11 0 12
total       1729 13707 48
Proteins
Unit 1 GLY9 MET10 ARG11 GLY12 LEU13 ALA14 VAL15 PHE16 ILE17 SER18 ASP19 ILE20 ARG21 ASN22 CYS23 LYS24 SER25 LYS26 GLU27 ALA28 GLU29 ILE30 LYS31 ARG32 ILE33 ASN34 LYS35 GLU36 LEU37 ALA38 ASN39 ILE40 ARG41 SER42 LYS43 PHE44 LYS45 GLY46 ASP47 LYS48 ALA49 LEU50 ASP51 GLY52 TYR53 SER54 LYS55 LYS56 LYS57 TYR58 VAL59 CYS60 LYS61 LEU62 LEU63 PHE64 ILE65 PHE66 LEU67 LEU68 GLY69 HIS70 ASP71 ILE72 ASP73 PHE74 GLY75 HIS76 MET77 GLU78 ALA79 VAL80 ASN81 LEU82 LEU83 SER84 SER85 ASN86 ARG87 TYR88 THR89 GLU90 LYS91 GLN92 ILE93 GLY94 TYR95 LEU96 PHE97 ILE98 SER99 VAL100 LEU101 VAL102 ASN103 SER104 ASN105 SER106 GLU107 LEU108 ILE109 ARG110 LEU111 ILE112 ASN113 ASN114 ALA115 ILE116 LYS117 ASN118 ASP119 LEU120 ALA121 SER122 ARG123 ASN124 PRO125 THR126 PHE127 MET128 GLY129 LEU130 ALA131 LEU132 HIS133 CYS134 ILE135 ALA136 ASN137 VAL138 GLY139 SER140 ARG141 GLU142 MET143 ALA144 GLU145 ALA146 PHE147 ALA148 GLY149 GLU150 ILE151 PRO152 LYS153 ILE154 LEU155 VAL156 ALA157 GLY158 ASP159 THR160 MET161 ASP162 SER163 VAL164 LYS165 GLN166 SER167 ALA168 ALA169 LEU170 CYS171 LEU172 LEU173 ARG174 LEU175 TYR176 ARG177 THR178 SER179 PRO180 ASP181 LEU182 VAL183 PRO184 MET185 GLY186 ASP187 TRP188 THR189 SER190 ARG191 VAL192 VAL193 HIS194 LEU195 LEU196 ASN197 ASP198 GLN199 HIS200 LEU201 GLY202 VAL203 VAL204 THR205 ALA206 ALA207 THR208 SER209 LEU210 ILE211 THR212 THR213 LEU214 ALA215 GLN216 LYS217 ASN218 PRO219 GLU220 GLU221 PHE222 LYS223 THR224 SER225 VAL226 SER227 LEU228 ALA229 VAL230 SER231 ARG232 LEU233 SER234 ARG235 ILE236 VAL237 THR238 SER239 ALA240 SER241 THR242 ASP243 LEU244 GLN245 ASP246 TYR247 THR248 TYR249 TYR250 PHE251 VAL252 PRO253 ALA254 PRO255 TRP256 LEU257 SER258 VAL259 LYS260 LEU261 LEU262 ARG263 LEU264 LEU265 GLN266 CYS267 TYR268 PRO269 PRO270 PRO271 GLU272 ASP273 PRO274 ALA275 VAL276 ARG277 GLY278 ARG279 LEU280 THR281 GLU282 CYS283 LEU284 GLU285 THR286 ILE287 LEU288 ASN289 LYS290 ALA291 GLN292 GLU293 PRO294 PRO295 LYS296 SER297 LYS298 LYS299 VAL300 GLN301 HIS302 SER303 ASN304 ALA305 LYS306 ASN307 ALA308 VAL309 LEU310 PHE311 GLU312 ALA313 ILE314 SER315 LEU316 ILE317 ILE318 HIS319 HIS320 ASP321 SER322 GLU323 PRO324 ASN325 LEU326 LEU327 VAL328 ARG329 ALA330 CYS331 ASN332 GLN333 LEU334 GLY335 GLN336 PHE337 LEU338 GLN339 HIS340 ARG341 GLU342 THR343 ASN344 LEU345 ARG346 TYR347 LEU348 ALA349 LEU350 GLU351 SER352 MET353 CYS354 THR355 LEU356 ALA357 SER358 SER359 GLU360 PHE361 SER362 HIS363 GLU364 ALA365 VAL366 LYS367 THR368 HIS369 ILE370 GLU371 THR372 VAL373 ILE374 ASN375 ALA376 LEU377 LYS378 THR379 GLU380 ARG381 ASP382 VAL383 SER384 VAL385 ARG386 GLN387 ARG388 ALA389 VAL390 ASP391 LEU392 LEU393 TYR394 ALA395 MET396 CYS397 ASP398 ARG399 SER400 ASN401 ALA402 GLN403 GLN404 ILE405 VAL406 ALA407 GLU408 MET409 LEU410 SER411 TYR412 LEU413 GLU414 THR415 ALA416 ASP417 TYR418 SER419 ILE420 ARG421 GLU422 GLU423 ILE424 VAL425 LEU426 LYS427 VAL428 ALA429 ILE430 LEU431 ALA432 GLU433 LYS434 TYR435 ALA436 VAL437 ASP438 TYR439 THR440 TRP441 TYR442 VAL443 ASP444 THR445 ILE446 LEU447 ASN448 LEU449 ILE450 ARG451 ILE452 ALA453 GLY454 ASP455 TYR456 VAL457 SER458 GLU459 GLU460 VAL461 TRP462 TYR463 ARG464 VAL465 ILE466 GLN467 ILE468 VAL469 ILE470 ASN471 ARG472 ASP473 ASP474 VAL475 GLN476 GLY477 TYR478 ALA479 ALA480 LYS481 THR482 VAL483 PHE484 GLU485 ALA486 LEU487 GLN488 ALA489 PRO490 ALA491 CYS492 HIS493 GLU494 ASN495 LEU496 VAL497 LYS498 VAL499 GLY500 GLY501 TYR502 ILE503 LEU504 GLY505 GLU506 PHE507 GLY508 ASN509 LEU510 ILE511 ALA512 GLY513 ASP514 PRO515 ARG516 SER517 SER518 PRO519 LEU520 ILE521 GLN522 PHE523 ASN524 LEU525 LEU526 HIS527 SER528 LYS529 PHE530 HIS531 LEU532 CYS533 SER534 VAL535 PRO536 THR537 ARG538 ALA539 LEU540 LEU541 LEU542 SER543 THR544 TYR545 ILE546 LYS547 PHE548 VAL549 ASN550 LEU551 PHE552 PRO553 GLU554 VAL555 LYS556 ALA557 THR558 ILE559 GLN560 ASP561 VAL562 LEU563 ARG564 SER565 ASP566 SER567 GLN568 LEU569 LYS570 ASN571 ALA572 ASP573 VAL574 GLU575 LEU576 GLN577 GLN578 ARG579 ALA580 VAL581 GLU582 TYR583 LEU584 ARG585 LEU586 SER587 THR588 VAL589 ALA590 SER591 THR592 ASP593 ILE594 LEU595 ALA596 THR597 VAL598 LEU599 GLU600 GLU601 MET602 PRO603 PRO604 PHE605 PRO606 GLU607 ARG608
Unit 2 SER4 LYS5 TYR6 PHE7 THR8 THR9 ASN10 LYS11 LYS12 GLY13 GLU14 ILE15 PHE16 GLU17 LEU18 LYS19 ALA20 GLU21 LEU22 ASN23 ASN24 GLU25 LYS26 LYS27 GLU28 LYS29 ARG30 LYS31 GLU32 ALA33 VAL34 LYS35 LYS36 VAL37 ILE38 ALA39 ALA40 MET41 THR42 VAL43 GLY44 LYS45 ASP46 VAL47 SER48 SER49 LEU50 PHE51 PRO52 ASP53 VAL54 VAL55 ASN56 CYS57 MET58 GLN59 THR60 ASP61 ASN62 LEU63 GLU64 LEU65 LYS66 LYS67 LEU68 VAL69 TYR70 LEU71 TYR72 LEU73 MET74 ASN75 TYR76 ALA77 LYS78 SER79 GLN80 PRO81 ASP82 MET83 ALA84 ILE85 MET86 ALA87 VAL88 ASN89 SER90 PHE91 VAL92 LYS93 ASP94 CYS95 GLU96 ASP97 PRO98 ASN99 PRO100 LEU101 ILE102 ARG103 ALA104 LEU105 ALA106 VAL107 ARG108 THR109 MET110 GLY111 CYS112 ILE113 ARG114 VAL115 ASP116 LYS117 ILE118 THR119 GLU120 TYR121 LEU122 CYS123 GLU124 PRO125 LEU126 ARG127 LYS128 CYS129 LEU130 LYS131 ASP132 GLU133 ASP134 PRO135 TYR136 VAL137 ARG138 LYS139 THR140 ALA141 ALA142 VAL143 CYS144 VAL145 ALA146 LYS147 LEU148 HIS149 ASP150 ILE151 ASN152 ALA153 GLN154 MET155 VAL156 GLU157 ASP158 GLN159 GLY160 PHE161 LEU162 ASP163 SER164 LEU165 ARG166 ASP167 LEU168 ILE169 ALA170 ASP171 SER172 ASN173 PRO174 MET175 VAL176 VAL177 ALA178 ASN179 ALA180 VAL181 ALA182 ALA183 LEU184 SER185 GLU186 ILE187 SER188 GLU189 SER190 HIS191 PRO192 ASN193 SER194 ASN195 LEU196 LEU197 ASP198 LEU199 ASN200 PRO201 GLN202 ASN203 ILE204 ASN205 LYS206 LEU207 LEU208 THR209 ALA210 LEU211 ASN212 GLU213 CYS214 THR215 GLU216 TRP217 GLY218 GLN219 ILE220 PHE221 ILE222 LEU223 ASP224 CYS225 LEU226 SER227 ASN228 TYR229 ASN230 PRO231 LYS232 ASP233 ASP234 ARG235 GLU236 ALA237 GLN238 SER239 ILE240 CYS241 GLU242 ARG243 VAL244 THR245 PRO246 ARG247 LEU248 SER249 HIS250 ALA251 ASN252 SER253 ALA254 VAL255 VAL256 LEU257 SER258 ALA259 VAL260 LYS261 VAL262 LEU263 MET264 LYS265 PHE266 LEU267 GLU268 LEU269 LEU270 PRO271 LYS272 ASP273 SER274 ASP275 TYR276 TYR277 ASN278 MET279 LEU280 LEU281 LYS282 LYS283 LEU284 ALA285 PRO286 PRO287 LEU288 VAL289 THR290 LEU291 LEU292 SER293 GLY294 GLU295 PRO296 GLU297 VAL298 GLN299 TYR300 VAL301 ALA302 LEU303 ARG304 ASN305 ILE306 ASN307 LEU308 ILE309 VAL310 GLN311 LYS312 ARG313 PRO314 GLU315 ILE316 LEU317 LYS318 GLN319 GLU320 ILE321 LYS322 VAL323 PHE324 PHE325 VAL326 LYS327 TYR328 ASN329 ASP330 PRO331 ILE332 TYR333 VAL334 LYS335 LEU336 GLU337 LYS338 LEU339 ASP340 ILE341 MET342 ILE343 ARG344 LEU345 ALA346 SER347 GLN348 ALA349 ASN350 ILE351 ALA352 GLN353 VAL354 LEU355 ALA356 GLU357 LEU358 LYS359 GLU360 TYR361 ALA362 THR363 GLU364 VAL365 ASP366 VAL367 ASP368 PHE369 VAL370 ARG371 LYS372 ALA373 VAL374 ARG375 ALA376 ILE377 GLY378 ARG379 CYS380 ALA381 ILE382 LYS383 VAL384 GLU385 GLN386 SER387 ALA388 GLU389 ARG390 CYS391 VAL392 SER393 THR394 LEU395 LEU396 ASP397 LEU398 ILE399 GLN400 THR401 LYS402 VAL403 ASN404 TYR405 VAL406 VAL407 GLN408 GLU409 ALA410 ILE411 VAL412 VAL413 ILE414 ARG415 ASP416 ILE417 PHE418 ARG419 LYS420 TYR421 PRO422 ASN423 LYS424 TYR425 GLU426 SER427 ILE428 ILE429 ALA430 THR431 LEU432 CYS433 GLU434 ASN435 LEU436 ASP437 SER438 LEU439 ASP440 GLU441 PRO442 ASP443 ALA444 ARG445 ALA446 ALA447 MET448 ILE449 TRP450 ILE451 VAL452 GLY453 GLU454 TYR455 ALA456 GLU457 ARG458 ILE459 ASP460 ASN461 ALA462 ASP463 GLU464 LEU465 LEU466 GLU467 SER468 PHE469 LEU470 GLU471 GLY472 PHE473 HIS474 ASP475 GLU476 SER477 THR478 GLN479 VAL480 GLN481 LEU482 THR483 LEU484 LEU485 THR486 ALA487 ILE488 VAL489 LYS490 LEU491 PHE492 LEU493 LYS494 LYS495 PRO496 SER497 GLU498 THR499 GLN500 GLU501 LEU502 VAL503 GLN504 GLN505 VAL506 LEU507 SER508 LEU509 ALA510 THR511 GLN512 ASP513 SER514 ASP515 ASN516 PRO517 ASP518 LEU519 ARG520 ASP521 ARG522 GLY523 TYR524 ILE525 TYR526 TRP527 ARG528 LEU529 LEU530 SER531 THR532 ASP533 PRO534 VAL535 THR536 ALA537 LYS538 GLU539 VAL540 VAL541 LEU542 SER543 GLU544 LYS545 PRO546 LEU547 ILE548 SER549 GLU550 GLU551 THR552 ASP553 LEU554 ILE555 GLU556 PRO557 THR558 LEU559 LEU560 ASP561 GLU562 LEU563 ILE564 CYS565 HIS566 ILE567 GLY568 SER569 LEU570 ALA571 SER572 VAL573 TYR574 HIS575 LYS576 PRO577 PRO578 ASN579 ALA580 PHE581 VAL582
Unit 3 MET1 ILE2 GLY3 GLY4 LEU5 PHE6 ILE7 TYR8 ASN9 HIS10 LYS11 GLY12 GLU13 VAL14 LEU15 ILE16 SER17 ARG18 VAL19 TYR20 ARG21 ASP22 ASP23 ILE24 GLY25 ARG26 ASN27 ALA28 VAL29 ASP30 ALA31 PHE32 ARG33 VAL34 ASN35 VAL36 ILE37 HIS38 ALA39 ARG40 GLN41 GLN42 VAL43 ARG44 SER45 PRO46 VAL47 THR48 ASN49 ILE50 ALA51 ARG52 THR53 SER54 PHE55 PHE56 HIS57 VAL58 LYS59 ARG60 SER61 ASN62 ILE63 TRP64 LEU65 ALA66 ALA67 VAL68 THR69 LYS70 GLN71 ASN72 VAL73 ASN74 ALA75 ALA76 MET77 VAL78 PHE79 GLU80 PHE81 LEU82 TYR83 LYS84 MET85 CYS86 ASP87 VAL88 MET89 ALA90 ALA91 TYR92 PHE93 GLY94 LYS95 ILE96 SER97 GLU98 GLU99 ASN100 ILE101 LYS102 ASN103 ASN104 PHE105 VAL106 LEU107 ILE108 TYR109 GLU110 LEU111 LEU112 ASP113 GLU114 ILE115 LEU116 ASP117 PHE118 GLY119 TYR120 PRO121 GLN122 ASN123 SER124 GLU125 THR126 GLY127 ALA128 LEU129 LYS130 THR131 PHE132 ILE133 THR134 GLN135 GLN136 GLY137 ILE138 LYS139 SER140 GLN141 ILE159 GLY160 TRP161 ARG162 ARG163 GLU164 GLY165 ILE166 LYS167 TYR168 ARG169 ARG170 ASN171 GLU172 LEU173 PHE174 LEU175 ASP176 VAL177 LEU178 GLU179 SER180 VAL181 ASN182 LEU183 LEU184 MET185 SER186 PRO187 GLN188 GLY189 GLN190 VAL191 LEU192 SER193 ALA194 HIS195 VAL196 SER197 GLY198 ARG199 VAL200 VAL201 MET202 LYS203 SER204 TYR205 LEU206 SER207 GLY208 MET209 PRO210 GLU211 CYS212 LYS213 PHE214 GLY215 MET216 ASN217 ASP218 LYS219 ILE220 VAL221 ILE222 SER240 ILE241 ALA242 ILE243 ASP244 ASP245 CYS246 THR247 PHE248 HIS249 GLN250 CYS251 VAL252 ARG253 LEU254 SER255 ARG261 SER262 ILE263 SER264 PHE265 ILE266 PRO267 PRO268 ASP269 GLY270 GLU271 PHE272 GLU273 LEU274 MET275 ARG276 TYR277 ARG278 THR279 THR280 LYS281 ASP282 ILE283 ILE284 LEU285 PRO286 PHE287 ARG288 VAL289 ILE290 PRO291 LEU292 VAL293 ARG294 GLU295 VAL296 GLY297 ARG298 THR299 LYS300 LEU301 GLU302 VAL303 LYS304 VAL305 VAL306 ILE307 LYS308 SER309 ASN310 PHE311 LYS312 PRO313 SER314 LEU315 LEU316 ALA317 GLN318 LYS319 ILE320 GLU321 VAL322 ARG323 ILE324 PRO325 THR326 PRO327 LEU328 ASN329 THR330 SER331 GLY332 VAL333 GLN334 VAL335 ILE336 CYS337 MET338 LYS339 GLY340 LYS341 ALA342 LYS343 TYR344 LYS345 ALA346 SER347 GLU348 ASN349 ALA350 ILE351 VAL352 TRP353 LYS354 ILE355 LYS356 ARG357 MET358 ALA359 GLY360 MET361 LYS362 GLU363 SER364 GLN365 ILE366 SER367 ALA368 GLU369 ILE370 GLU371 LEU372 LEU373 PRO374 THR375 ASN376 ASP377 LYS378 LYS379 LYS380 TRP381 ALA382 ARG383 PRO384 PRO385 ILE386 SER387 MET388 ASN389 PHE390 GLU391 VAL392 PRO393 PHE394 ALA395 PRO396 SER397 GLY398 LEU399 LYS400 VAL401 ARG402 TYR403 LEU404 LYS405 VAL406 PHE407 GLU408 PRO409 LYS410 LEU411 ASN412 TYR413 SER414 ASP415 HIS416 ASP417 VAL418 ILE419 LYS420 TRP421 VAL422 ARG423 TYR424 ILE425 GLY426 ARG427 SER428 GLY429 ILE430 TYR431 GLU432 THR433 ARG434 CYS435
Unit 4 MET1 ILE2 ARG3 PHE4 ILE5 LEU6 ILE7 GLN8 ASN9 ARG10 ALA11 GLY12 LYS13 THR14 ARG15 LEU16 ALA17 LYS18 TRP19 TYR20 MET21 GLN22 PHE23 ASP24 ASP25 ASP26 GLU27 LYS28 GLN29 LYS30 LEU31 ILE32 GLU33 GLU34 VAL35 HIS36 ALA37 VAL38 VAL39 THR40 VAL41 ARG42 ASP43 ALA44 LYS45 HIS46 THR47 ASN48 PHE49 VAL50 GLU51 PHE52 ARG53 ASN54 PHE55 LYS56 ILE57 ILE58 TYR59 ARG60 ARG61 TYR62 ALA63 GLY64 LEU65 TYR66 PHE67 CYS68 ILE69 CYS70 VAL71 ASP72 VAL73 ASN74 ASP75 ASN76 ASN77 LEU78 ALA79 TYR80 LEU81 GLU82 ALA83 ILE84 HIS85 ASN86 PHE87 VAL88 GLU89 VAL90 LEU91 ASN92 GLU93 TYR94 PHE95 HIS96 ASN97 VAL98 CYS99 GLU100 LEU101 ASP102 LEU103 VAL104 PHE105 ASN106 PHE107 TYR108 LYS109 VAL110 TYR111 THR112 VAL113 VAL114 ASP115 GLU116 MET117 PHE118 LEU119 ALA120 GLY121 GLU122 ILE123 ARG124 GLU125 THR126 SER127 GLN128 THR129 LYS130 VAL131 LEU132 LYS133 GLN134 LEU135 LEU136 MET137 LEU138 GLN139 SER140 LEU141 GLU142
Ligands
Unit 5 IHP1609
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany