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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A BONSAI VERSION OF THE HUMAN NDC80 COM
Keywords MITOSIS, CENTROMERE, CELL CYCLE, MICROTUBULE, KINETOCHORE, C DIVISION, CALPONIN HOMOLOGY
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VE7     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 246 1980 0
2  Protein    B 303 2447 0
3  Protein    C 219 1800 0
4  Protein    D 242 1983 0
5  Ligand    A 1 0 6
6  Ligand    B 1 0 6
7  Ligand    C 1 0 7
8  Ligand    D 1 0 7
9 Water     22 0 22
total       1036 8210 48

Proteins
Unit 1 MET79 ILE80 LYS81 ASP82 PRO83 ARG84 PRO85 LEU86 ASN87 ASP88 LYS89 ALA90 PHE91 ILE92 GLN93 GLN94 CYS95 ILE96 ARG97 GLN98 LEU99 CYS100 GLU101 PHE102 LEU103 THR104 GLU105 ASN106 GLY107 TYR108 ALA109 HIS110 ASN111 VAL112 SER113 MET114 LYS115 SER116 LEU117 GLN118 ALA119 PRO120 SER121 VAL122 LYS123 ASP124 PHE125 LEU126 LYS127 ILE128 PHE129 THR130 PHE131 LEU132 TYR133 GLY134 PHE135 LEU136 CYS137 PRO138 SER139 TYR140 GLU141 LEU142 PRO143 ASP144 THR145 LYS146 PHE147 GLU148 GLU149 GLU150 VAL151 PRO152 ARG153 ILE154 PHE155 LYS156 ASP157 LEU158 GLY159 TYR160 PRO161 PHE162 ALA163 LEU164 SER165 LYS166 SER167 SER168 MET169 TYR170 THR171 VAL172 GLY173 ALA174 PRO175 HIS176 THR177 TRP178 PRO179 HIS180 ILE181 VAL182 ALA183 ALA184 LEU185 VAL186 TRP187 LEU188 ILE189 ASP190 CYS191 ILE192 LYS193 ILE194 HIS195 THR196 ALA197 MET198 LYS199 GLU200 SER201 SER202 GLY212 GLU213 GLU214 THR215 GLU216 ASP217 GLY218 ILE219 MET220 HIS221 ASN222 LYS223 LEU224 PHE225 LEU226 ASP227 TYR228 THR229 ILE230 LYS231 CYS232 TYR233 GLU234 SER235 PHE236 MET237 SER238 GLY239 ALA240 ASP241 SER242 PHE243 ASP244 GLU245 MET246 ASN247 ALA248 GLU249 LEU250 GLN251 SER252 LYS253 LEU254 LYS255 ASP256 LEU257 PHE258 ASN259 VAL260 ASP261 ALA262 PHE263 LYS264 LEU265 GLU266 SER267 LEU268 GLU269 ALA270 LYS271 ASN272 ARG273 ALA274 LEU275 ASN276 GLU277 GLN278 ILE279 ALA280 ARG281 LEU282 GLU283 GLN284 GLU285 ARG286 SER1118 THR1119 ALA1120 ASN1121 LYS1122 ALA1123 ASN1124 ALA1125 GLU1126 ARG1127 LEU1128 LYS1129 ARG1130 LEU1131 GLN1132 LYS1133 SER1134 ALA1135 ASP1136 LEU1137 TYR1138 LYS1139 ASP1140 ARG1141 LEU1142 GLY1143 LEU1144 GLU1145 ILE1146 ARG1147 PHE1158 THR1159 ASN1160 ILE1161 ASN1165 PRO1166 GLU1167 SER1168 PRO1169 PHE1170 ARG1215 LYS1216 ALA1217 PHE1218 THR1219 ALA1220 THR1221
Unit 2 MET79 ILE80 LYS81 ASP82 PRO83 ARG84 PRO85 LEU86 ASN87 ASP88 LYS89 ALA90 PHE91 ILE92 GLN93 GLN94 CYS95 ILE96 ARG97 GLN98 LEU99 CYS100 GLU101 PHE102 LEU103 THR104 GLU105 ASN106 GLY107 TYR108 ALA109 HIS110 ASN111 VAL112 SER113 MET114 LYS115 SER116 LEU117 GLN118 ALA119 PRO120 SER121 VAL122 LYS123 ASP124 PHE125 LEU126 LYS127 ILE128 PHE129 THR130 PHE131 LEU132 TYR133 GLY134 PHE135 LEU136 CYS137 PRO138 SER139 TYR140 GLU141 LEU142 PRO143 ASP144 THR145 LYS146 PHE147 GLU148 GLU149 GLU150 VAL151 PRO152 ARG153 ILE154 PHE155 LYS156 ASP157 LEU158 GLY159 TYR160 PRO161 PHE162 ALA163 LEU164 SER165 LYS166 SER167 SER168 MET169 TYR170 THR171 VAL172 GLY173 ALA174 PRO175 HIS176 THR177 TRP178 PRO179 HIS180 ILE181 VAL182 ALA183 ALA184 LEU185 VAL186 TRP187 LEU188 ILE189 ASP190 CYS191 ILE192 LYS193 ILE194 HIS195 THR196 ALA197 MET198 LYS199 GLU200 SER201 SER202 TRP211 GLY212 GLU213 GLU214 THR215 GLU216 ASP217 GLY218 ILE219 MET220 HIS221 ASN222 LYS223 LEU224 PHE225 LEU226 ASP227 TYR228 THR229 ILE230 LYS231 CYS232 TYR233 GLU234 SER235 PHE236 MET237 SER238 GLY239 ALA240 ASP241 SER242 PHE243 ASP244 GLU245 MET246 ASN247 ALA248 GLU249 LEU250 GLN251 SER252 LYS253 LEU254 LYS255 ASP256 LEU257 PHE258 ASN259 VAL260 ASP261 ALA262 PHE263 LYS264 LEU265 GLU266 SER267 LEU268 GLU269 ALA270 LYS271 ASN272 ARG273 ALA274 LEU275 ASN276 GLU277 GLN278 ILE279 ALA280 ARG281 LEU282 GLU283 GLN284 GLU285 ARG286 SER1118 THR1119 ALA1120 ASN1121 LYS1122 ALA1123 ASN1124 ALA1125 GLU1126 ARG1127 LEU1128 LYS1129 ARG1130 LEU1131 GLN1132 LYS1133 SER1134 ALA1135 ASP1136 LEU1137 TYR1138 LYS1139 ASP1140 ARG1141 LEU1142 GLY1143 LEU1144 GLU1145 ILE1146 ARG1147 LYS1148 ILE1149 TYR1150 GLY1151 GLU1152 LYS1153 LEU1154 GLN1155 PHE1156 ILE1157 PHE1158 THR1159 ASN1160 ILE1161 ASP1162 PRO1163 LYS1164 ASN1165 PRO1166 GLU1167 SER1168 PRO1169 PHE1170 MET1171 PHE1172 SER1173 LEU1174 HIS1175 LEU1176 ASN1177 GLU1178 ALA1179 ARG1180 ASP1181 TYR1182 GLU1183 VAL1184 SER1185 ASP1186 SER1187 ALA1188 GLY1193 LEU1194 ALA1195 GLU1196 PHE1197 GLN1198 GLU1199 ASN1200 VAL1201 ARG1202 LYS1203 THR1204 ASN1205 ASN1206 PHE1207 SER1208 ALA1209 PHE1210 LEU1211 ALA1212 ASN1213 VAL1214 ARG1215 LYS1216 ALA1217 PHE1218 THR1219 ALA1220 THR1221 VAL1222 TYR1223 GLN1224
Unit 3 LEU4 SER5 PHE6 PRO7 ARG8 TYR9 ASN10 VAL11 ALA12 GLU13 ILE14 VAL15 ILE16 HIS17 ILE18 ARG19 ASN20 LYS21 ILE22 LEU23 THR24 GLY25 ALA26 ASP27 GLY28 LYS29 ASN30 LEU31 THR32 LYS33 ASN34 ASP35 LEU36 TYR37 PRO38 ASN39 PRO40 LYS41 PRO42 GLU43 VAL44 LEU45 HIS46 MET47 ILE48 TYR49 MET50 ARG51 ALA52 LEU53 GLN54 ILE55 VAL56 TYR57 GLY58 ILE59 ARG60 LEU61 GLU62 HIS63 PHE64 TYR65 MET66 MET67 PRO68 VAL69 ASN70 SER71 GLY72 VAL73 MET74 TYR75 PRO76 HIS77 LEU78 MET79 GLU80 GLY81 PHE82 LEU83 PRO84 PHE85 SER86 ASN87 LEU88 VAL89 THR90 HIS91 LEU92 ASP93 SER94 PHE95 LEU96 PRO97 ILE98 CYS99 ARG100 VAL101 ASN102 ASP103 PHE104 GLU105 THR106 ALA107 ASP108 ILE109 LEU110 CYS111 PRO112 LYS113 ALA114 LYS115 ARG116 THR117 SER118 ARG119 PHE120 LEU121 SER122 GLY123 ILE124 ILE125 ASN126 PHE127 ILE128 HIS129 PHE130 ARG131 GLU132 ALA133 CYS134 ARG135 GLU136 THR137 TYR138 MET139 GLU140 PHE141 LEU142 TRP143 GLN144 TYR145 LYS146 SER147 SER148 ALA149 ASP150 LYS151 MET152 GLN153 GLN154 LEU155 ASN156 ALA157 ALA158 HIS159 GLN160 GLU161 ALA162 LEU163 MET164 LYS165 LEU166 GLU167 ILE1133 PRO1134 SER1135 ALA1136 VAL1137 TYR1138 VAL1139 ALA1140 GLN1141 LEU1142 TYR1143 HIS1144 GLN1145 VAL1146 SER1147 LYS1148 ILE1149 GLU1150 TRP1151 GLU1152 TYR1153 GLU1154 CYS1155 GLU1156 PRO1157 GLY1158 MET1159 VAL1160 LYS1161 GLY1162 ILE1163 HIS1164 GLN1171 PRO1172 ILE1173 HIS1174 LEU1175 ASP1176 SER1177 THR1178 GLN1179 LEU1180 SER1181 ARG1182 LYS1183 PHE1184 ILE1185 SER1186 ASP1187 TYR1188 LEU1189 TRP1190 SER1191 LEU1192 VAL1193
Unit 4 LEU4 SER5 PHE6 PRO7 ARG8 TYR9 ASN10 VAL11 ALA12 GLU13 ILE14 VAL15 ILE16 HIS17 ILE18 ARG19 ASN20 LYS21 ILE22 LEU23 THR24 GLY25 ALA26 ASP27 GLY28 LYS29 ASN30 LEU31 THR32 LYS33 ASN34 ASP35 LEU36 TYR37 PRO38 ASN39 PRO40 LYS41 PRO42 GLU43 VAL44 LEU45 HIS46 MET47 ILE48 TYR49 MET50 ARG51 ALA52 LEU53 GLN54 ILE55 VAL56 TYR57 GLY58 ILE59 ARG60 LEU61 GLU62 HIS63 PHE64 TYR65 MET66 MET67 PRO68 VAL69 ASN70 SER71 GLY72 VAL73 MET74 TYR75 PRO76 HIS77 LEU78 MET79 GLU80 GLY81 PHE82 LEU83 PRO84 PHE85 SER86 ASN87 LEU88 VAL89 THR90 HIS91 LEU92 ASP93 SER94 PHE95 LEU96 PRO97 ILE98 CYS99 ARG100 VAL101 ASN102 ASP103 PHE104 GLU105 THR106 ALA107 ASP108 ILE109 LEU110 CYS111 PRO112 LYS113 ALA114 LYS115 ARG116 THR117 SER118 ARG119 PHE120 LEU121 SER122 GLY123 ILE124 ILE125 ASN126 PHE127 ILE128 HIS129 PHE130 ARG131 GLU132 ALA133 CYS134 ARG135 GLU136 THR137 TYR138 MET139 GLU140 PHE141 LEU142 TRP143 GLN144 TYR145 LYS146 SER147 SER148 ALA149 ASP150 LYS151 MET152 GLN153 GLN154 LEU155 ASN156 ALA157 ALA158 HIS159 GLN160 GLU161 ALA162 LEU163 MET164 LYS165 LEU166 GLU167 ARG168 LEU169 GLU1122 LYS1123 GLU1124 VAL1125 ASP1126 GLU1127 ASP1128 THR1129 THR1130 VAL1131 THR1132 ILE1133 PRO1134 SER1135 ALA1136 VAL1137 TYR1138 VAL1139 ALA1140 GLN1141 LEU1142 TYR1143 HIS1144 GLN1145 VAL1146 SER1147 LYS1148 ILE1149 GLU1150 TRP1151 GLU1152 TYR1153 GLU1154 CYS1155 GLU1156 PRO1157 GLY1158 MET1159 VAL1160 LYS1161 GLY1162 ILE1163 HIS1164 HIS1165 GLY1166 PRO1167 SER1168 VAL1169 ALA1170 GLN1171 PRO1172 ILE1173 HIS1174 LEU1175 ASP1176 SER1177 THR1178 GLN1179 LEU1180 SER1181 ARG1182 LYS1183 PHE1184 ILE1185 SER1186 ASP1187 TYR1188 LEU1189 TRP1190 SER1191 LEU1192 VAL1193 ASP1194 THR1195 GLU1196 TRP1197

Ligands
Unit 5 GOL2222
Unit 6 GOL2225
Unit 7 IPH2194
Unit 8 IPH2198

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany