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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE NS3 PROTEASE-HELICASE FROM DENGUE VIRUS
Keywords TRANSMEMBRANE, RNA REPLICATION, NS2B-NS3 PROTEASE, NS3 BIFUN ENZYME, NUCLEOTIDE-BINDING, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VBC     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DENGUE 4 NS3 FULL-LENGTH PROTEIN  A 600 4720 0
2  Protein   PARTIAL POLYPROTEIN FOR NS2A AND NS2B, TYPE 4 PRO  DV4 H241  B 15 114 0
3 Water     34 0 34
total       649 4834 34

Proteins
Unit 1 SER19 GLU20 GLY21 VAL22 TYR23 ARG24 ILE25 MET26 GLN27 ARG28 GLY29 LEU30 PHE31 GLY32 LYS33 THR34 GLN35 VAL36 GLY37 VAL38 GLY39 ILE40 HIS41 MET42 GLU43 GLY44 VAL45 PHE46 HIS47 THR48 MET49 TRP50 HIS51 VAL52 THR53 ARG54 GLY55 SER56 VAL57 ILE58 CYS59 HIS60 GLU61 THR62 GLY63 ARG64 LEU65 GLU66 PRO67 SER68 TRP69 ALA70 ASP71 VAL72 ARG73 ASN74 ASP75 MET76 ILE77 SER78 TYR79 GLY80 GLY81 GLY82 TRP83 ARG84 LEU85 GLY86 ASP87 LYS88 TRP89 ASP90 LYS91 GLU92 GLU93 ASP94 VAL95 GLN96 VAL97 LEU98 ALA99 ILE100 GLU101 PRO102 GLY103 LYS104 ASN105 PRO106 LYS107 HIS108 VAL109 GLN110 THR111 LYS112 PRO113 GLY114 LEU115 PHE116 LYS117 THR118 LEU119 THR120 GLY121 GLU122 ILE123 GLY124 ALA125 VAL126 THR127 LEU128 ASP129 PHE130 LYS131 PRO132 GLY133 THR134 SER135 GLY136 SER137 PRO138 ILE139 ILE140 ASN141 LYS142 LYS143 GLY144 LYS145 VAL146 ILE147 GLY148 LEU149 TYR150 GLY151 ASN152 GLY153 VAL154 VAL155 THR156 LYS157 SER158 GLY159 ASP160 TYR161 VAL162 SER163 ALA164 ILE165 THR166 GLN167 ALA168 GLU169 ARG170 ILE171 GLY172 GLU173 PRO174 ASP175 TYR176 GLU177 VAL178 ASP179 GLU180 ASP181 ILE182 PHE183 ARG184 LYS185 LYS186 ARG187 LEU188 THR189 ILE190 MET191 ASP192 LEU193 HIS194 PRO195 GLY196 ALA197 GLY198 LYS199 THR200 LYS201 ARG202 ILE203 LEU204 PRO205 SER206 ILE207 VAL208 ARG209 GLU210 ALA211 LEU212 LYS213 ARG214 ARG215 LEU216 ARG217 THR218 LEU219 ILE220 LEU221 ALA222 PRO223 THR224 ARG225 VAL226 VAL227 ALA228 ALA229 GLU230 MET231 GLU232 GLU233 ALA234 LEU235 ARG236 GLY237 LEU238 PRO239 ILE240 ARG241 TYR242 GLN243 THR244 PRO245 ALA246 VAL247 LYS248 SER249 ASP250 HIS251 THR252 GLY253 ARG254 GLU255 ILE256 VAL257 ASP258 LEU259 MET260 CYS261 HIS262 ALA263 THR264 PHE265 THR266 THR267 ARG268 LEU269 LEU270 SER271 SER272 THR273 ARG274 VAL275 PRO276 ASN277 TYR278 ASN279 LEU280 ILE281 VAL282 MET283 ASP284 GLU285 ALA286 HIS287 PHE288 THR289 ASP290 PRO291 CYS292 SER293 VAL294 ALA295 ALA296 ARG297 GLY298 TYR299 ILE300 SER301 THR302 ARG303 VAL304 GLU305 MET306 GLY307 GLU308 ALA309 ALA310 ALA311 ILE312 PHE313 MET314 THR315 ALA316 THR317 PRO318 PRO319 GLY320 SER321 THR322 ASP323 PRO324 PHE325 PRO326 GLN327 SER328 ASN329 SER330 PRO331 ILE332 GLU333 ASP334 ILE335 GLU336 ARG337 GLU338 ILE339 PRO340 GLU341 ARG342 SER343 TRP344 ASN345 THR346 GLY347 PHE348 ASP349 TRP350 ILE351 THR352 ASP353 TYR354 GLN355 GLY356 LYS357 THR358 VAL359 TRP360 PHE361 VAL362 PRO363 SER364 ILE365 LYS366 ALA367 GLY368 ASN369 ASP370 ILE371 ALA372 ASN373 CYS374 LEU375 ARG376 LYS377 SER378 GLY379 LYS380 ARG381 VAL382 ILE383 GLN384 LEU385 SER386 ARG387 LYS388 THR389 PHE390 ASP391 THR392 GLU393 TYR394 PRO395 LYS396 THR397 LYS398 LEU399 THR400 ASP401 TRP402 ASP403 PHE404 VAL405 VAL406 THR407 THR408 ASP409 ILE410 SER411 GLU412 MET413 GLY414 ALA415 ASN416 PHE417 ARG418 ALA419 GLY420 ARG421 VAL422 ILE423 ASP424 PRO425 ARG426 ARG427 CYS428 LEU429 LYS430 PRO431 VAL432 ILE433 LEU434 THR435 ASP436 GLY437 PRO438 GLU439 ARG440 VAL441 ILE442 LEU443 ALA444 GLY445 PRO446 ILE447 PRO448 VAL449 THR450 PRO451 ALA452 SER453 ALA454 ALA455 GLN456 ARG457 ARG458 GLY459 ARG460 ILE461 GLY462 ARG463 ASN464 PRO465 ALA466 GLN467 GLU468 ASP469 ASP470 GLN471 TYR472 VAL473 PHE474 SER475 GLY476 ASP477 PRO478 LEU479 LYS480 ASN481 ASP482 GLU483 ASP484 HIS485 ALA486 HIS487 TRP488 THR489 GLU490 ALA491 LYS492 MET493 LEU494 LEU495 ASP496 ASN497 ILE498 TYR499 THR500 PRO501 GLU502 GLY503 ILE504 ILE505 PRO506 THR507 LEU508 PHE509 GLY510 PRO511 GLU512 ARG513 GLU514 LYS515 THR516 GLN517 ALA518 ILE519 ASP520 GLY521 GLU522 PHE523 ARG524 LEU525 ARG526 GLY527 GLU528 GLN529 ARG530 LYS531 THR532 PHE533 VAL534 GLU535 LEU536 MET537 ARG538 ARG539 GLY540 ASP541 LEU542 PRO543 VAL544 TRP545 LEU546 SER547 TYR548 LYS549 VAL550 ALA551 SER552 ALA553 GLY554 ILE555 SER556 TYR557 LYS558 ASP559 ARG560 GLU561 TRP562 CYS563 PHE564 THR565 GLY566 GLU567 ARG568 ASN569 ASN570 GLN571 ILE572 LEU573 GLU574 GLU575 ASN576 MET577 GLU578 VAL579 GLU580 ILE581 TRP582 THR583 ARG584 GLU585 GLY586 GLU587 LYS588 LYS589 LYS590 LEU591 ARG592 PRO593 LYS594 TRP595 LEU596 ASP597 ALA598 ARG599 VAL600 TYR601 ALA602 ASP603 PRO604 MET605 ALA606 LEU607 LYS608 ASP609 PHE610 LYS611 GLU612 PHE613 ALA614 SER615 GLY616 ARG617 LYS618
Unit 2 ALA49 ASP50 LEU51 SER52 LEU53 GLU54 LYS55 ALA56 ALA57 ASN58 VAL59 GLN60 TRP61 ASP62 GLU63

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany