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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN ESCHERICHIA COLI TRNAGLY MICROHELIX ANGSTROM RESOLUTION
Keywords RNA, GLYCYL-TRNA SYNTHETASE (GLYRS) SYSTEM, TRNAGLY ACCEPTOR MICROHELIX, RNA TRNA IDENTITY ELEMENTS, MAGNESIUM BINDING S
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2VAL     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 7 153 0
2  RNA    B 7 153 0
3  RNA    C 7 140 0
4  RNA    D 7 140 0
5  Ligand   5'-R(*UP*UP*CP*CP*CP*GP*CP)-3'  C 1 0 1
6 Water     56 0 56
total       85 586 57

Nucleic acids
Unit 1 G1 C2 G3 G4 G5 A6 A7
Unit 2 G1 C2 G3 G4 G5 A6 A7
Unit 3 U66 U67 C68 C69 C70 G71 C72
Unit 4 U66 U67 C68 C69 C70 G71 C72

Ligands
Unit 5 MG1073

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany