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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 AT 1.1A RESOLUTION
Keywords V(D)J RECOMBINATION, COVALENT MODIFICATIONS, RAG, HISTONE, N NUCLEASE, HYDROLASE, PHD FINGER, DNA-BINDING, RECOMBINASE, ENDONUCLEASE, TRIMETHYL LYSINE, DNA RECOMBINATION, PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2V89     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VDJ RECOMBINATION-ACTIVATING PROTEIN 2  A 90 1329 33
2  Protein   VDJ RECOMBINATION-ACTIVATING PROTEIN 2  B 74 1133 0
3  Protein   HISTONE H3  D 90 1329 33
4  Protein   HISTONE H3  E 10 134 31
5  Protein   VDJ RECOMBINATION-ACTIVATING PROTEIN 2  A 90 1329 33
6  Ligand   VDJ RECOMBINATION-ACTIVATING PROTEIN 2  B 2 0 2
7 Water     319 0 319
total       675 5254 451
Proteins
Unit 1 SER1410 PRO1411 GLU1412 PHE1413 GLY1414 TYR1415 TRP1416 ILE1417 THR1418 CYS1419 CYS1420 PRO1421 THR1422 CYS1423 ASP1424 VAL1425 ASP1426 ILE1427 ASN1428 THR1429 TRP1430 VAL1431 PRO1432 PHE1433 TYR1434 SER1435 THR1436 GLU1437 LEU1438 ASN1439 LYS1440 PRO1441 ALA1442 MET1443 ILE1444 TYR1445 CYS1446 SER1447 HIS1448 GLY1449 ASP1450 GLY1451 HIS1452 TRP1453 VAL1454 HIS1455 ALA1456 GLN1457 CYS1458 MET1459 ASP1460 LEU1461 GLU1462 GLU1463 ARG1464 THR1465 LEU1466 ILE1467 HIS1468 LEU1469 SER1470 GLU1471 GLY1472 SER1473 ASN1474 LYS1475 TYR1476 TYR1477 CYS1478 ASN1479 GLU1480 HIS1481 VAL1482 GLN1483 ILE1484 ALA1485 ARG1486 ALA1487 ZN2488 ZN2489 ALA3001 ARG3002 THR3003 M3L3004 GLN3005 THR3006 ALA3007 ALA3008 LYS3009 ALA3010
Unit 2 GLY414 TYR415 TRP416 ILE417 THR418 CYS419 CYS420 PRO421 THR422 CYS423 ASP424 VAL425 ASP426 ILE427 ASN428 THR429 TRP430 VAL431 PRO432 PHE433 TYR434 SER435 THR436 GLU437 LEU438 ASN439 LYS440 PRO441 ALA442 MET443 ILE444 TYR445 CYS446 SER447 HIS448 GLY449 ASP450 GLY451 HIS452 TRP453 VAL454 HIS455 ALA456 GLN457 CYS458 MET459 ASP460 LEU461 GLU462 GLU463 ARG464 THR465 LEU466 ILE467 HIS468 LEU469 SER470 GLU471 GLY472 SER473 ASN474 LYS475 TYR476 TYR477 CYS478 ASN479 GLU480 HIS481 VAL482 GLN483 ILE484 ALA485 ARG486 ALA487
Unit 3 SER1410 PRO1411 GLU1412 PHE1413 GLY1414 TYR1415 TRP1416 ILE1417 THR1418 CYS1419 CYS1420 PRO1421 THR1422 CYS1423 ASP1424 VAL1425 ASP1426 ILE1427 ASN1428 THR1429 TRP1430 VAL1431 PRO1432 PHE1433 TYR1434 SER1435 THR1436 GLU1437 LEU1438 ASN1439 LYS1440 PRO1441 ALA1442 MET1443 ILE1444 TYR1445 CYS1446 SER1447 HIS1448 GLY1449 ASP1450 GLY1451 HIS1452 TRP1453 VAL1454 HIS1455 ALA1456 GLN1457 CYS1458 MET1459 ASP1460 LEU1461 GLU1462 GLU1463 ARG1464 THR1465 LEU1466 ILE1467 HIS1468 LEU1469 SER1470 GLU1471 GLY1472 SER1473 ASN1474 LYS1475 TYR1476 TYR1477 CYS1478 ASN1479 GLU1480 HIS1481 VAL1482 GLN1483 ILE1484 ALA1485 ARG1486 ALA1487 ZN2488 ZN2489 ALA3001 ARG3002 THR3003 M3L3004 GLN3005 THR3006 ALA3007 ALA3008 LYS3009 ALA3010
Unit 4 ALA2001 ARG2002 THR2003 M3L2004 GLN2005 THR2006 ALA2007 ALA2008 LYS2009 ALA2010
Unit 5 SER1410 PRO1411 GLU1412 PHE1413 GLY1414 TYR1415 TRP1416 ILE1417 THR1418 CYS1419 CYS1420 PRO1421 THR1422 CYS1423 ASP1424 VAL1425 ASP1426 ILE1427 ASN1428 THR1429 TRP1430 VAL1431 PRO1432 PHE1433 TYR1434 SER1435 THR1436 GLU1437 LEU1438 ASN1439 LYS1440 PRO1441 ALA1442 MET1443 ILE1444 TYR1445 CYS1446 SER1447 HIS1448 GLY1449 ASP1450 GLY1451 HIS1452 TRP1453 VAL1454 HIS1455 ALA1456 GLN1457 CYS1458 MET1459 ASP1460 LEU1461 GLU1462 GLU1463 ARG1464 THR1465 LEU1466 ILE1467 HIS1468 LEU1469 SER1470 GLU1471 GLY1472 SER1473 ASN1474 LYS1475 TYR1476 TYR1477 CYS1478 ASN1479 GLU1480 HIS1481 VAL1482 GLN1483 ILE1484 ALA1485 ARG1486 ALA1487 ZN2488 ZN2489 ALA3001 ARG3002 THR3003 M3L3004 GLN3005 THR3006 ALA3007 ALA3008 LYS3009 ALA3010
Ligands
Unit 6 ZN1488 ZN1489
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany