2V5J - Sequence, Chains, Asymmetric and Biological Units

• Title: APO CLASS II ALDOLASE HPCH
• Keywords: LYASE, CLASS II ALDOLASE, HOMOPROTOCATECHUATE, AROMATIC DEGR AROMATIC HYDROCARBONS CATABOLISM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2V5J	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE	A	269	2028	0
2	Protein	2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE	B	262	1979	0
3	Ligand	2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE	A	4	0	23
4	Ligand	2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE	B	3	0	17
5	Water			511	0	511
total				1049	4007	551

Proteins

Unit 1

THR -8 GLU -7 ASN -6 LEU -5 TYR -4 PHE -3 GLN -2 GLY -1 ALA 0 MET 1 GLU 2 ASN 3 SER 4 PHE 5 LYS 6 ALA 7 ALA 8 LEU 9 LYS 10 ALA 11 GLY 12 ARG 13 PRO 14 GLN 15 ILE 16 GLY 17 LEU 18 TRP 19 LEU 20 GLY 21 LEU 22 SER 23 SER 24 SER 25 TYR 26 SER 27 ALA 28 GLU 29 LEU 30 LEU 31 ALA 32 GLY 33 ALA 34 GLY 35 PHE 36 ASP 37 TRP 38 LEU 39 LEU 40 ILE 41 ASP 42 GLY 43 GLU 44 HIS 45 ALA 46 PRO 47 ASN 48 ASN 49 VAL 50 GLN 51 THR 52 VAL 53 LEU 54 THR 55 GLN 56 LEU 57 GLN 58 ALA 59 ILE 60 ALA 61 PRO 62 TYR 63 PRO 64 SER 65 GLN 66 PRO 67 VAL 68 VAL 69 ARG 70 PRO 71 SER 72 TRP 73 ASN 74 ASP 75 PRO 76 VAL 77 GLN 78 ILE 79 LYS 80 GLN 81 LEU 82 LEU 83 ASP 84 VAL 85 GLY 86 THR 87 GLN 88 THR 89 LEU 90 LEU 91 VAL 92 PRO 93 MET 94 VAL 95 GLN 96 ASN 97 ALA 98 ASP 99 GLU 100 ALA 101 ARG 102 GLU 103 ALA 104 VAL 105 ARG 106 ALA 107 THR 108 ARG 109 TYR 110 PRO 111 PRO 112 ALA 113 GLY 114 ILE 115 ARG 116 GLY 117 VAL 118 GLY 119 SER 120 ALA 121 LEU 122 ALA 123 ARG 124 ALA 125 SER 126 ARG 127 TRP 128 ASN 129 ARG 130 ILE 131 PRO 132 ASP 133 TYR 134 LEU 135 GLN 136 LYS 137 ALA 138 ASN 139 ASP 140 GLN 141 MET 142 CYS 143 VAL 144 LEU 145 VAL 146 GLN 147 ILE 148 GLU 149 THR 150 ARG 151 GLU 152 ALA 153 MET 154 LYS 155 ASN 156 LEU 157 PRO 158 GLN 159 ILE 160 LEU 161 ASP 162 VAL 163 GLU 164 GLY 165 VAL 166 ASP 167 GLY 168 VAL 169 PHE 170 ILE 171 GLY 172 PRO 173 ALA 174 ASP 175 LEU 176 SER 177 ALA 178 ASP 179 MET 180 GLY 181 TYR 182 ALA 183 GLY 184 ASN 185 PRO 186 GLN 187 HIS 188 PRO 189 GLU 190 VAL 191 GLN 192 ALA 193 ALA 194 ILE 195 GLU 196 GLN 197 ALA 198 ILE 199 VAL 200 GLN 201 ILE 202 ARG 203 GLU 204 SER 205 GLY 206 LYS 207 ALA 208 PRO 209 GLY 210 ILE 211 LEU 212 ILE 213 ALA 214 ASN 215 GLU 216 GLN 217 LEU 218 ALA 219 LYS 220 ARG 221 TYR 222 LEU 223 GLU 224 LEU 225 GLY 226 ALA 227 LEU 228 PHE 229 VAL 230 ALA 231 VAL 232 GLY 233 VAL 234 ASP 235 THR 236 THR 237 LEU 238 LEU 239 ALA 240 ARG 241 ALA 242 ALA 243 GLU 244 ALA 245 LEU 246 ALA 247 ALA 248 ARG 249 PHE 250 GLY 251 ALA 252 GLN 253 ALA 254 THR 255 ALA 256 VAL 257 LYS 258 PRO 259 GLY 260

Unit 2

THR -8 GLU -7 ASN -6 LEU -5 TYR -4 PHE -3 GLN -2 GLY -1 ALA 0 MET 1 GLU 2 ASN 3 SER 4 PHE 5 LYS 6 ALA 7 ALA 8 LEU 9 LYS 10 ALA 11 GLY 12 ARG 13 PRO 14 GLN 15 ILE 16 GLY 17 LEU 18 TRP 19 LEU 20 GLY 21 LEU 22 SER 23 SER 24 SER 25 TYR 26 SER 27 ALA 28 GLU 29 LEU 30 LEU 31 ALA 32 GLY 33 ALA 34 GLY 35 PHE 36 ASP 37 TRP 38 LEU 39 LEU 40 ILE 41 ASP 42 GLY 43 GLU 44 HIS 45 ALA 46 PRO 47 ASN 48 ASN 49 VAL 50 GLN 51 THR 52 VAL 53 LEU 54 THR 55 GLN 56 LEU 57 GLN 58 ALA 59 ILE 60 ALA 61 PRO 62 TYR 63 PRO 64 SER 65 GLN 66 PRO 67 VAL 68 VAL 69 ARG 70 PRO 71 SER 72 TRP 73 ASN 74 ASP 75 PRO 76 VAL 77 GLN 78 ILE 79 LYS 80 GLN 81 LEU 82 LEU 83 ASP 84 VAL 85 GLY 86 THR 87 GLN 88 THR 89 LEU 90 LEU 91 VAL 92 PRO 93 MET 94 VAL 95 GLN 96 ASN 97 ALA 98 ASP 99 GLU 100 ALA 101 ARG 102 GLU 103 ALA 104 VAL 105 ARG 106 ALA 107 THR 108 ARG 109 TYR 110 PRO 111 PRO 112 ALA 113 GLY 114 ILE 115 ARG 116 GLY 117 VAL 118 GLY 119 SER 120 ALA 121 LEU 122 ALA 123 ARG 124 ALA 125 SER 126 ARG 127 TRP 128 ASN 129 ARG 130 ILE 131 PRO 132 ASP 133 TYR 134 LEU 135 GLN 136 LYS 137 ALA 138 ASN 139 ASP 140 GLN 141 MET 142 CYS 143 VAL 144 LEU 145 VAL 146 GLN 147 ILE 148 GLU 149 THR 150 ARG 151 GLU 152 ALA 153 MET 154 LYS 155 ASN 156 LEU 157 PRO 158 GLN 159 ILE 160 LEU 161 ASP 162 VAL 163 GLU 164 GLY 165 VAL 166 ASP 167 GLY 168 VAL 169 PHE 170 ILE 171 GLY 172 PRO 173 ALA 174 ASP 175 LEU 176 SER 177 ALA 178 ASP 179 MET 180 GLY 181 TYR 182 ALA 183 GLY 184 ASN 185 PRO 186 GLN 187 HIS 188 PRO 189 GLU 190 VAL 191 GLN 192 ALA 193 ALA 194 ILE 195 GLU 196 GLN 197 ALA 198 ILE 199 VAL 200 GLN 201 ILE 202 ARG 203 GLU 204 SER 205 GLY 206 LYS 207 ALA 208 PRO 209 GLY 210 ILE 211 LEU 212 ILE 213 ALA 214 ASN 215 GLU 216 GLN 217 LEU 218 ALA 219 LYS 220 ARG 221 TYR 222 LEU 223 GLU 224 LEU 225 GLY 226 ALA 227 LEU 228 PHE 229 VAL 230 ALA 231 VAL 232 GLY 233 VAL 234 ASP 235 THR 236 THR 237 LEU 238 LEU 239 ALA 240 ARG 241 ALA 242 ALA 243 GLU 244 ALA 245 LEU 246 ALA 247 ALA 248 ARG 249 PHE 250 GLY 251 ALA 252 GLN 253

Ligands

Unit 3	PO4 1260 GOL 1261 GOL 1262 GOL 1263
Unit 4	PO4 1253 GOL 1254 GOL 1255