2V4R - Sequence, Chains, Asymmetric and Biological Units

• Title: NON-PRODUCTIVE COMPLEX OF THE Y-FAMILY DNA POLYMERASE DPO4 W SKIPPING THE M1DG ADDUCT TO PAIR WITH THE NEXT TEMPLATE CYT
• Keywords: DNA-DIRECTED DNA POLYMERASE, DNA-BINDING, METAL-BINDING, DNA REPLICATION, MUTATOR PROTEIN, NUCLEOTIDYLTRANSFERASE, DNA A DNA DAMAGE, DNA REPAIR, TRANSFERASE, DPO4, M1DG, CYTOPLASM, MAGNESIUM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2V4R	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA POLYMERASE IV5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'	A	343	2754	0
2	Other macromolecule	DNA POLYMERASE IV5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'	P	13	273	0
3	Other macromolecule	5'-D(*TP*CP*AP*CP*M1GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3'	T	17	313	25
4	Ligand	DNA POLYMERASE IV5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'	A	4	0	34
5	Water			134	0	134
total				511	3340	193

Proteins

Unit 1

HIS 1 MET 2 ILE 3 VAL 4 LEU 5 PHE 6 VAL 7 ASP 8 PHE 9 ASP 10 TYR 11 PHE 12 TYR 13 ALA 14 GLN 15 VAL 16 GLU 17 GLU 18 VAL 19 LEU 20 ASN 21 PRO 22 SER 23 LEU 24 LYS 25 GLY 26 LYS 27 PRO 28 VAL 29 VAL 30 VAL 31 CYS 32 VAL 33 PHE 34 SER 35 GLY 36 ARG 37 PHE 38 GLU 39 ASP 40 SER 41 GLY 42 ALA 43 VAL 44 ALA 45 THR 46 ALA 47 ASN 48 TYR 49 GLU 50 ALA 51 ARG 52 LYS 53 PHE 54 GLY 55 VAL 56 LYS 57 ALA 58 GLY 59 ILE 60 PRO 61 ILE 62 VAL 63 GLU 64 ALA 65 LYS 66 LYS 67 ILE 68 LEU 69 PRO 70 ASN 71 ALA 72 VAL 73 TYR 74 LEU 75 PRO 76 MET 77 ARG 78 LYS 79 GLU 80 VAL 81 TYR 82 GLN 83 GLN 84 VAL 85 SER 86 SER 87 ARG 88 ILE 89 MET 90 ASN 91 LEU 92 LEU 93 ARG 94 GLU 95 TYR 96 SER 97 GLU 98 LYS 99 ILE 100 GLU 101 ILE 102 ALA 103 SER 104 ILE 105 ASP 106 GLU 107 ALA 108 TYR 109 LEU 110 ASP 111 ILE 112 SER 113 ASP 114 LYS 115 VAL 116 ARG 117 ASP 118 TYR 119 ARG 120 GLU 121 ALA 122 TYR 123 ASN 124 LEU 125 GLY 126 LEU 127 GLU 128 ILE 129 LYS 130 ASN 131 LYS 132 ILE 133 LEU 134 GLU 135 LYS 136 GLU 137 LYS 138 ILE 139 THR 140 VAL 141 THR 142 VAL 143 GLY 144 ILE 145 SER 146 LYS 147 ASN 148 LYS 149 VAL 150 PHE 151 ALA 152 LYS 153 ILE 154 ALA 155 ALA 156 ASP 157 MET 158 ALA 159 LYS 160 PRO 161 ASN 162 GLY 163 ILE 164 LYS 165 VAL 166 ILE 167 ASP 168 ASP 169 GLU 170 GLU 171 VAL 172 LYS 173 ARG 174 LEU 175 ILE 176 ARG 177 GLU 178 LEU 179 ASP 180 ILE 181 ALA 182 ASP 183 VAL 184 PRO 185 GLY 186 ILE 187 GLY 188 ASN 189 ILE 190 THR 191 ALA 192 GLU 193 LYS 194 LEU 195 LYS 196 LYS 197 LEU 198 GLY 199 ILE 200 ASN 201 LYS 202 LEU 203 VAL 204 ASP 205 THR 206 LEU 207 SER 208 ILE 209 GLU 210 PHE 211 ASP 212 LYS 213 LEU 214 LYS 215 GLY 216 MET 217 ILE 218 GLY 219 GLU 220 ALA 221 LYS 222 ALA 223 LYS 224 TYR 225 LEU 226 ILE 227 SER 228 LEU 229 ALA 230 ARG 231 ASP 232 GLU 233 TYR 234 ASN 235 GLU 236 PRO 237 ILE 238 ARG 239 THR 240 ARG 241 VAL 242 ARG 243 LYS 244 SER 245 ILE 246 GLY 247 ARG 248 ILE 249 VAL 250 THR 251 MET 252 LYS 253 ARG 254 ASN 255 SER 256 ARG 257 ASN 258 LEU 259 GLU 260 GLU 261 ILE 262 LYS 263 PRO 264 TYR 265 LEU 266 PHE 267 ARG 268 ALA 269 ILE 270 GLU 271 GLU 272 SER 273 TYR 274 TYR 275 LYS 276 LEU 277 ASP 278 LYS 279 ARG 280 ILE 281 PRO 282 LYS 283 ALA 284 ILE 285 HIS 286 VAL 287 VAL 288 ALA 289 VAL 290 THR 291 GLU 292 ASP 293 LEU 294 ASP 295 ILE 296 VAL 297 SER 298 ARG 299 GLY 300 ARG 301 THR 302 PHE 303 PRO 304 HIS 305 GLY 306 ILE 307 SER 308 LYS 309 GLU 310 THR 311 ALA 312 TYR 313 SER 314 GLU 315 SER 316 VAL 317 LYS 318 LEU 319 LEU 320 GLN 321 LYS 322 ILE 323 LEU 324 GLU 325 GLU 326 ASP 327 GLU 328 ARG 329 LYS 330 ILE 331 ARG 332 ARG 333 ILE 334 GLY 335 VAL 336 ARG 337 PHE 338 SER 339 LYS 340 PHE 341 ILE 342 GLU 343

Other macromolecules

Unit 2	DG 1 DG 2 DG 3 DG 4 DG 5 DA 6 DA 7 DG 8 DG 9 DA 10 DT 11 DT 12 DC 13
Unit 3	DC 2 DA 3 DC 4 M1G 5 DG 6 DA 7 DA 8 DT 9 DC 10 DC 11 DT 12 DT 13 DC 14 DC 15 DC 16 DC 17 DC 18

Ligands

Unit 4

DGT 404 CA 1000 CA 1001 CA 1002