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Sequence, Chains, Asymmetric and Biological Units

Title THE ISOMERASE DOMAIN OF HUMAN GLUTAMINE-FRUCTOSE-6-PHOSPHATE TRANSAMINASE 1 (GFPT1) IN COMPLEX WITH FRUCTOSE 6-PHOSPHATE
Keywords PHOSPHOPROTEIN, AMINOTRANSFERASE, FRUCTOSE 6-PHOSPHATE, ALTE SPLICING, GLUTAMINE AMIDOTRANSFERASE, DIMER, ISOMERASE, SIS TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2V4M     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  A 352 2755 0
2  Protein   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  B 351 2746 0
3  Protein   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  C 352 2763 0
4  Protein   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  D 350 2742 0
5  Ligand   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  A 1 0 16
6  Ligand   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  B 1 0 16
7  Ligand   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  C 2 0 17
8  Ligand   GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERAS [ISOMERIZING] 1  D 1 0 16
9 Water     164 0 164
total       1574 11006 229

Proteins
Unit 1 LYS336 GLY337 ASN338 PHE339 SER340 SER341 PHE342 MET343 GLN344 LYS345 GLU346 ILE347 PHE348 GLU349 GLN350 PRO351 GLU352 SER353 VAL354 VAL355 ASN356 THR357 MET358 ARG359 GLY360 ARG361 VAL362 ASN363 PHE364 ASP365 ASP366 TYR367 THR368 VAL369 ASN370 LEU371 GLY372 GLY373 LEU374 LYS375 ASP376 HIS377 ILE378 LYS379 GLU380 ILE381 GLN382 ARG383 CYS384 ARG385 ARG386 LEU387 ILE388 LEU389 ILE390 ALA391 CYS392 GLY393 THR394 SER395 TYR396 HIS397 ALA398 GLY399 VAL400 ALA401 THR402 ARG403 GLN404 VAL405 LEU406 GLU407 GLU408 LEU409 THR410 GLU411 LEU412 PRO413 VAL414 MET415 VAL416 GLU417 LEU418 ALA419 SER420 ASP421 PHE422 LEU423 ASP424 ARG425 ASN426 THR427 PRO428 VAL429 PHE430 ARG431 ASP432 ASP433 VAL434 CYS435 PHE436 PHE437 LEU438 SER439 GLN440 SER441 GLY442 GLU443 THR444 ALA445 ASP446 THR447 LEU448 MET449 GLY450 LEU451 ARG452 TYR453 CYS454 LYS455 GLU456 ARG457 GLY458 ALA459 LEU460 THR461 VAL462 GLY463 ILE464 THR465 ASN466 THR467 VAL468 GLY469 SER470 SER471 ILE472 SER473 ARG474 GLU475 THR476 ASP477 CYS478 GLY479 VAL480 HIS481 ILE482 ASN483 ALA484 GLY485 PRO486 GLU487 ILE488 GLY489 VAL490 ALA491 SER492 THR493 LYS494 ALA495 TYR496 THR497 SER498 GLN499 PHE500 VAL501 SER502 LEU503 VAL504 MET505 PHE506 ALA507 LEU508 MET509 MET510 CYS511 ASP512 ASP513 ARG514 ILE515 SER516 MET517 GLN518 GLU519 ARG520 ARG521 LYS522 GLU523 ILE524 MET525 LEU526 GLY527 LEU528 LYS529 ARG530 LEU531 PRO532 ASP533 LEU534 ILE535 LYS536 GLU537 VAL538 LEU539 SER540 MET541 ASP542 ASP543 GLU544 ILE545 GLN546 LYS547 LEU548 ALA549 THR550 GLU551 LEU552 TYR553 HIS554 GLN555 LYS556 SER557 VAL558 LEU559 ILE560 MET561 GLY562 ARG563 GLY564 TYR565 HIS566 TYR567 ALA568 THR569 CYS570 LEU571 GLU572 GLY573 ALA574 LEU575 LYS576 ILE577 LYS578 GLU579 ILE580 THR581 TYR582 MET583 HIS584 SER585 GLU586 GLY587 ILE588 LEU589 ALA590 GLY591 GLU592 LEU593 LYS594 HIS595 GLY596 PRO597 LEU598 ALA599 LEU600 VAL601 ASP602 LYS603 LEU604 MET605 PRO606 VAL607 ILE608 MET609 ILE610 ILE611 MET612 ARG613 ASP614 HIS615 THR616 TYR617 ALA618 LYS619 CYS620 GLN621 ASN622 ALA623 LEU624 GLN625 GLN626 VAL627 VAL628 ALA629 ARG630 GLN631 GLY632 ARG633 PRO634 VAL635 VAL636 ILE637 CYS638 ASP639 LYS640 GLU641 ASP642 THR643 GLU644 THR645 ILE646 LYS647 ASN648 THR649 LYS650 ARG651 THR652 ILE653 LYS654 VAL655 PRO656 HIS657 SER658 VAL659 ASP660 CYS661 LEU662 GLN663 GLY664 ILE665 LEU666 SER667 VAL668 ILE669 PRO670 LEU671 GLN672 LEU673 LEU674 ALA675 PHE676 HIS677 LEU678 ALA679 VAL680 LEU681 ARG682 GLY683 TYR684 ASP685 VAL686 ASP687
Unit 2 GLY337 ASN338 PHE339 SER340 SER341 PHE342 MET343 GLN344 LYS345 GLU346 ILE347 PHE348 GLU349 GLN350 PRO351 GLU352 SER353 VAL354 VAL355 ASN356 THR357 MET358 ARG359 GLY360 ARG361 VAL362 ASN363 PHE364 ASP365 ASP366 TYR367 THR368 VAL369 ASN370 LEU371 GLY372 GLY373 LEU374 LYS375 ASP376 HIS377 ILE378 LYS379 GLU380 ILE381 GLN382 ARG383 CYS384 ARG385 ARG386 LEU387 ILE388 LEU389 ILE390 ALA391 CYS392 GLY393 THR394 SER395 TYR396 HIS397 ALA398 GLY399 VAL400 ALA401 THR402 ARG403 GLN404 VAL405 LEU406 GLU407 GLU408 LEU409 THR410 GLU411 LEU412 PRO413 VAL414 MET415 VAL416 GLU417 LEU418 ALA419 SER420 ASP421 PHE422 LEU423 ASP424 ARG425 ASN426 THR427 PRO428 VAL429 PHE430 ARG431 ASP432 ASP433 VAL434 CYS435 PHE436 PHE437 LEU438 SER439 GLN440 SER441 GLY442 GLU443 THR444 ALA445 ASP446 THR447 LEU448 MET449 GLY450 LEU451 ARG452 TYR453 CYS454 LYS455 GLU456 ARG457 GLY458 ALA459 LEU460 THR461 VAL462 GLY463 ILE464 THR465 ASN466 THR467 VAL468 GLY469 SER470 SER471 ILE472 SER473 ARG474 GLU475 THR476 ASP477 CYS478 GLY479 VAL480 HIS481 ILE482 ASN483 ALA484 GLY485 PRO486 GLU487 ILE488 GLY489 VAL490 ALA491 SER492 THR493 LYS494 ALA495 TYR496 THR497 SER498 GLN499 PHE500 VAL501 SER502 LEU503 VAL504 MET505 PHE506 ALA507 LEU508 MET509 MET510 CYS511 ASP512 ASP513 ARG514 ILE515 SER516 MET517 GLN518 GLU519 ARG520 ARG521 LYS522 GLU523 ILE524 MET525 LEU526 GLY527 LEU528 LYS529 ARG530 LEU531 PRO532 ASP533 LEU534 ILE535 LYS536 GLU537 VAL538 LEU539 SER540 MET541 ASP542 ASP543 GLU544 ILE545 GLN546 LYS547 LEU548 ALA549 THR550 GLU551 LEU552 TYR553 HIS554 GLN555 LYS556 SER557 VAL558 LEU559 ILE560 MET561 GLY562 ARG563 GLY564 TYR565 HIS566 TYR567 ALA568 THR569 CYS570 LEU571 GLU572 GLY573 ALA574 LEU575 LYS576 ILE577 LYS578 GLU579 ILE580 THR581 TYR582 MET583 HIS584 SER585 GLU586 GLY587 ILE588 LEU589 ALA590 GLY591 GLU592 LEU593 LYS594 HIS595 GLY596 PRO597 LEU598 ALA599 LEU600 VAL601 ASP602 LYS603 LEU604 MET605 PRO606 VAL607 ILE608 MET609 ILE610 ILE611 MET612 ARG613 ASP614 HIS615 THR616 TYR617 ALA618 LYS619 CYS620 GLN621 ASN622 ALA623 LEU624 GLN625 GLN626 VAL627 VAL628 ALA629 ARG630 GLN631 GLY632 ARG633 PRO634 VAL635 VAL636 ILE637 CYS638 ASP639 LYS640 GLU641 ASP642 THR643 GLU644 THR645 ILE646 LYS647 ASN648 THR649 LYS650 ARG651 THR652 ILE653 LYS654 VAL655 PRO656 HIS657 SER658 VAL659 ASP660 CYS661 LEU662 GLN663 GLY664 ILE665 LEU666 SER667 VAL668 ILE669 PRO670 LEU671 GLN672 LEU673 LEU674 ALA675 PHE676 HIS677 LEU678 ALA679 VAL680 LEU681 ARG682 GLY683 TYR684 ASP685 VAL686 ASP687
Unit 3 PHE339 SER340 SER341 PHE342 MET343 GLN344 LYS345 GLU346 ILE347 PHE348 GLU349 GLN350 PRO351 GLU352 SER353 VAL354 VAL355 ASN356 THR357 MET358 ARG359 GLY360 ARG361 VAL362 ASN363 PHE364 ASP365 ASP366 TYR367 THR368 VAL369 ASN370 LEU371 GLY372 GLY373 LEU374 LYS375 ASP376 HIS377 ILE378 LYS379 GLU380 ILE381 GLN382 ARG383 CYS384 ARG385 ARG386 LEU387 ILE388 LEU389 ILE390 ALA391 CYS392 GLY393 THR394 SER395 TYR396 HIS397 ALA398 GLY399 VAL400 ALA401 THR402 ARG403 GLN404 VAL405 LEU406 GLU407 GLU408 LEU409 THR410 GLU411 LEU412 PRO413 VAL414 MET415 VAL416 GLU417 LEU418 ALA419 SER420 ASP421 PHE422 LEU423 ASP424 ARG425 ASN426 THR427 PRO428 VAL429 PHE430 ARG431 ASP432 ASP433 VAL434 CYS435 PHE436 PHE437 LEU438 SER439 GLN440 SER441 GLY442 GLU443 THR444 ALA445 ASP446 THR447 LEU448 MET449 GLY450 LEU451 ARG452 TYR453 CYS454 LYS455 GLU456 ARG457 GLY458 ALA459 LEU460 THR461 VAL462 GLY463 ILE464 THR465 ASN466 THR467 VAL468 GLY469 SER470 SER471 ILE472 SER473 ARG474 GLU475 THR476 ASP477 CYS478 GLY479 VAL480 HIS481 ILE482 ASN483 ALA484 GLY485 PRO486 GLU487 ILE488 GLY489 VAL490 ALA491 SER492 THR493 LYS494 ALA495 TYR496 THR497 SER498 GLN499 PHE500 VAL501 SER502 LEU503 VAL504 MET505 PHE506 ALA507 LEU508 MET509 MET510 CYS511 ASP512 ASP513 ARG514 ILE515 SER516 MET517 GLN518 GLU519 ARG520 ARG521 LYS522 GLU523 ILE524 MET525 LEU526 GLY527 LEU528 LYS529 ARG530 LEU531 PRO532 ASP533 LEU534 ILE535 LYS536 GLU537 VAL538 LEU539 SER540 MET541 ASP542 ASP543 GLU544 ILE545 GLN546 LYS547 LEU548 ALA549 THR550 GLU551 LEU552 TYR553 HIS554 GLN555 LYS556 SER557 VAL558 LEU559 ILE560 MET561 GLY562 ARG563 GLY564 TYR565 HIS566 TYR567 ALA568 THR569 CYS570 LEU571 GLU572 GLY573 ALA574 LEU575 LYS576 ILE577 LYS578 GLU579 ILE580 THR581 TYR582 MET583 HIS584 SER585 GLU586 GLY587 ILE588 LEU589 ALA590 GLY591 GLU592 LEU593 LYS594 HIS595 GLY596 PRO597 LEU598 ALA599 LEU600 VAL601 ASP602 LYS603 LEU604 MET605 PRO606 VAL607 ILE608 MET609 ILE610 ILE611 MET612 ARG613 ASP614 HIS615 THR616 TYR617 ALA618 LYS619 CYS620 GLN621 ASN622 ALA623 LEU624 GLN625 GLN626 VAL627 VAL628 ALA629 ARG630 GLN631 GLY632 ARG633 PRO634 VAL635 VAL636 ILE637 CYS638 ASP639 LYS640 GLU641 ASP642 THR643 GLU644 THR645 ILE646 LYS647 ASN648 THR649 LYS650 ARG651 THR652 ILE653 LYS654 VAL655 PRO656 HIS657 SER658 VAL659 ASP660 CYS661 LEU662 GLN663 GLY664 ILE665 LEU666 SER667 VAL668 ILE669 PRO670 LEU671 GLN672 LEU673 LEU674 ALA675 PHE676 HIS677 LEU678 ALA679 VAL680 LEU681 ARG682 GLY683 TYR684 ASP685 VAL686 ASP687 PHE688 PRO689 ARG690
Unit 4 ASN338 PHE339 SER340 SER341 PHE342 MET343 GLN344 LYS345 GLU346 ILE347 PHE348 GLU349 GLN350 PRO351 GLU352 SER353 VAL354 VAL355 ASN356 THR357 MET358 ARG359 GLY360 ARG361 VAL362 ASN363 PHE364 ASP365 ASP366 TYR367 THR368 VAL369 ASN370 LEU371 GLY372 GLY373 LEU374 LYS375 ASP376 HIS377 ILE378 LYS379 GLU380 ILE381 GLN382 ARG383 CYS384 ARG385 ARG386 LEU387 ILE388 LEU389 ILE390 ALA391 CYS392 GLY393 THR394 SER395 TYR396 HIS397 ALA398 GLY399 VAL400 ALA401 THR402 ARG403 GLN404 VAL405 LEU406 GLU407 GLU408 LEU409 THR410 GLU411 LEU412 PRO413 VAL414 MET415 VAL416 GLU417 LEU418 ALA419 SER420 ASP421 PHE422 LEU423 ASP424 ARG425 ASN426 THR427 PRO428 VAL429 PHE430 ARG431 ASP432 ASP433 VAL434 CYS435 PHE436 PHE437 LEU438 SER439 GLN440 SER441 GLY442 GLU443 THR444 ALA445 ASP446 THR447 LEU448 MET449 GLY450 LEU451 ARG452 TYR453 CYS454 LYS455 GLU456 ARG457 GLY458 ALA459 LEU460 THR461 VAL462 GLY463 ILE464 THR465 ASN466 THR467 VAL468 GLY469 SER470 SER471 ILE472 SER473 ARG474 GLU475 THR476 ASP477 CYS478 GLY479 VAL480 HIS481 ILE482 ASN483 ALA484 GLY485 PRO486 GLU487 ILE488 GLY489 VAL490 ALA491 SER492 THR493 LYS494 ALA495 TYR496 THR497 SER498 GLN499 PHE500 VAL501 SER502 LEU503 VAL504 MET505 PHE506 ALA507 LEU508 MET509 MET510 CYS511 ASP512 ASP513 ARG514 ILE515 SER516 MET517 GLN518 GLU519 ARG520 ARG521 LYS522 GLU523 ILE524 MET525 LEU526 GLY527 LEU528 LYS529 ARG530 LEU531 PRO532 ASP533 LEU534 ILE535 LYS536 GLU537 VAL538 LEU539 SER540 MET541 ASP542 ASP543 GLU544 ILE545 GLN546 LYS547 LEU548 ALA549 THR550 GLU551 LEU552 TYR553 HIS554 GLN555 LYS556 SER557 VAL558 LEU559 ILE560 MET561 GLY562 ARG563 GLY564 TYR565 HIS566 TYR567 ALA568 THR569 CYS570 LEU571 GLU572 GLY573 ALA574 LEU575 LYS576 ILE577 LYS578 GLU579 ILE580 THR581 TYR582 MET583 HIS584 SER585 GLU586 GLY587 ILE588 LEU589 ALA590 GLY591 GLU592 LEU593 LYS594 HIS595 GLY596 PRO597 LEU598 ALA599 LEU600 VAL601 ASP602 LYS603 LEU604 MET605 PRO606 VAL607 ILE608 MET609 ILE610 ILE611 MET612 ARG613 ASP614 HIS615 THR616 TYR617 ALA618 LYS619 CYS620 GLN621 ASN622 ALA623 LEU624 GLN625 GLN626 VAL627 VAL628 ALA629 ARG630 GLN631 GLY632 ARG633 PRO634 VAL635 VAL636 ILE637 CYS638 ASP639 LYS640 GLU641 ASP642 THR643 GLU644 THR645 ILE646 LYS647 ASN648 THR649 LYS650 ARG651 THR652 ILE653 LYS654 VAL655 PRO656 HIS657 SER658 VAL659 ASP660 CYS661 LEU662 GLN663 GLY664 ILE665 LEU666 SER667 VAL668 ILE669 PRO670 LEU671 GLN672 LEU673 LEU674 ALA675 PHE676 HIS677 LEU678 ALA679 VAL680 LEU681 ARG682 GLY683 TYR684 ASP685 VAL686 ASP687

Ligands
Unit 5 F6R800
Unit 6 F6R800
Unit 7 F6R800 CL1691
Unit 8 F6R800

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany