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Title | STRUCTURE OF YERSINIA ENTEROCOLITICA FAMILY 28 EXOPOLYGALACTURONASE | |
Keywords | GH28, PECTIN, CELL WALL, HYDROLASE, PERIPLASM, YERSINIA ENTEROCOLITICA, BETA-HELIX, GLYCOSIDASE, EXO-ACTIVITY | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2UVE | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | EXOPOLYGALACTURONASE | A | 571 | 4423 | 0 |
2 | Protein | EXOPOLYGALACTURONASE | B | 566 | 4388 | 0 |
3 | Ligand | EXOPOLYGALACTURONASE | A | 15 | 0 | 59 |
4 | Ligand | EXOPOLYGALACTURONASE | B | 14 | 0 | 49 |
5 | Water | 463 | 0 | 463 | ||
total | 1629 | 8811 | 571 |
Unit 1 | ASP36 ALA37 PRO38 GLN39 GLN40 LEU41 GLN42 VAL43 PRO44 THR45 LEU46 ALA47 TYR48 ASP49 GLU50 SER51 SER52 ILE53 VAL54 LEU55 VAL56 TRP57 LYS58 ALA59 PRO60 GLU61 ASP62 THR63 ARG64 LYS65 ILE66 VAL67 ASP68 TYR69 GLN70 ILE71 PHE72 SER73 ALA74 GLY75 LYS76 LEU77 LEU78 GLY79 LYS80 ALA81 SER82 ASP83 ASN84 ASN85 ASP86 ASN87 PHE88 SER89 PRO90 ALA91 LYS92 PRO93 TYR94 ILE95 ASP96 HIS97 PHE98 TYR99 VAL100 ASN101 ASP102 LYS103 ASP104 ASN105 PHE106 GLN107 HIS108 LYS109 ILE110 VAL111 MET112 GLN113 ASN114 PHE115 THR116 VAL117 ILE118 GLY119 LEU120 LYS121 PRO122 GLU123 THR124 SER125 TYR126 GLN127 PHE128 THR129 VAL130 LYS131 ALA132 GLN133 TYR134 ALA135 ASP136 GLY137 SER138 LEU139 SER140 VAL141 ALA142 SER143 LYS144 PRO145 ILE146 THR147 ALA148 LYS149 THR150 SER151 ALA152 LYS153 PRO154 GLN155 ILE156 VAL157 ASN158 VAL159 ARG160 ASP161 PHE162 GLY163 ALA164 ILE165 ASP166 ASP167 GLY168 LYS169 THR170 LEU171 ASN172 THR173 LYS174 ALA175 ILE176 GLN177 GLN178 ALA179 ILE180 ASP181 SER182 CYS183 LYS184 PRO185 GLY186 CYS187 ARG188 VAL189 GLU190 ILE191 PRO192 ALA193 GLY194 THR195 TYR196 LYS197 SER198 GLY199 ALA200 LEU201 TRP202 LEU203 LYS204 SER205 ASP206 MET207 THR208 LEU209 ASN210 LEU211 GLN212 ALA213 GLY214 ALA215 ILE216 LEU217 LEU218 GLY219 SER220 GLU221 ASN222 PRO223 ASP224 ASP225 TYR226 PRO227 ALA228 GLY229 TYR230 ARG231 LEU232 TYR233 PRO234 TYR235 SER236 THR237 ILE238 GLU239 ARG240 PRO241 ALA242 SER243 LEU244 ILE245 ASN246 ALA247 ILE248 ASP249 PRO250 ASN251 ASN252 SER253 LYS254 PRO255 GLY256 THR257 PHE258 ARG259 ASN260 ILE261 ARG262 ILE263 THR264 GLY265 SER266 GLY267 VAL268 ILE269 ASP270 GLY271 ASN272 GLY273 TRP274 LEU275 ARG276 ALA277 LYS278 THR279 ALA280 GLU281 ILE282 THR283 ASP284 GLU285 LEU286 GLY287 ARG288 SER289 LEU290 PRO291 GLN292 TYR293 VAL294 ALA295 SER296 LYS297 ASN298 SER299 LYS300 VAL301 HIS302 GLU303 ASP304 GLY305 ILE306 LEU307 ALA308 LYS309 ASN310 GLN311 VAL312 GLU313 LYS314 ALA315 VAL316 SER317 ASP318 GLY319 MET320 ASP321 LEU322 LYS323 ASN324 ALA325 TYR326 GLY327 GLN328 ARG329 ARG330 SER331 SER332 LEU333 MET334 THR335 LEU336 ARG337 GLY338 VAL339 GLU340 ASN341 VAL342 TYR343 LEU344 ALA345 GLY346 PHE347 THR348 VAL349 ARG350 ASN351 PRO352 ALA353 PHE354 HIS355 GLY356 ILE357 MET358 ASN359 LEU360 GLU361 ASN362 HIS363 ASN364 VAL365 VAL366 ALA367 ASN368 GLY369 LEU370 ILE371 HIS372 GLN373 THR374 TYR375 ASP376 ALA377 ASN378 ASN379 GLY380 ASP381 GLY382 ILE383 GLU384 PHE385 GLY386 ASN387 SER388 GLN389 ASN390 VAL391 MET392 VAL393 PHE394 ASN395 ASN396 PHE397 PHE398 ASP399 THR400 GLY401 ASP402 ASP403 CYS404 ILE405 ASN406 PHE407 ALA408 ALA409 GLY410 THR411 GLY412 GLU413 LYS414 ALA415 GLN416 GLU417 GLN418 GLU419 PRO420 MET421 LYS422 GLY423 ALA424 TRP425 LEU426 PHE427 ASN428 ASN429 TYR430 PHE431 ARG432 MET433 GLY434 HIS435 GLY436 ALA437 ILE438 VAL439 THR440 GLY441 SER442 HIS443 THR444 GLY445 ALA446 TRP447 ILE448 GLU449 ASP450 ILE451 LEU452 ALA453 GLU454 ASN455 ASN456 VAL457 MET458 TYR459 LEU460 THR461 ASP462 ILE463 GLY464 LEU465 ARG466 ALA467 LYS468 SER469 THR470 SER471 THR472 ILE473 GLY474 GLY475 GLY476 ALA477 ARG478 ASN479 VAL480 THR481 PHE482 ARG483 ASN484 ASN485 ALA486 MET487 ARG488 ASP489 LEU490 ALA491 LYS492 GLN493 VAL494 MET495 VAL496 MET497 THR498 LEU499 ASP500 TYR501 ALA502 ASP503 SER504 ASN505 ALA506 ASN507 ILE508 ASP509 TYR510 PRO511 PRO512 ALA513 LYS514 ILE515 PRO516 ALA517 GLN518 PHE519 TYR520 ASP521 PHE522 THR523 LEU524 LYS525 ASN526 VAL527 THR528 VAL529 ASP530 ASN531 SER532 THR533 GLY534 LYS535 ASN536 PRO537 SER538 ILE539 GLU540 ILE541 LYS542 GLY543 ASP544 THR545 ALA546 ASN547 LYS548 ALA549 TRP550 HIS551 ARG552 LEU553 VAL554 HIS555 VAL556 ASN557 ASN558 VAL559 GLN560 LEU561 ASN562 ASN563 VAL564 THR565 PRO566 THR567 ALA568 ILE569 SER570 ASP571 LEU572 ARG573 ASP574 SER575 GLU576 PHE577 ASN578 LYS579 VAL580 THR581 PHE582 THR583 GLU584 LEU585 ARG586 GLY587 ASP588 THR589 PRO590 TRP591 HIS592 PHE593 SER594 GLU595 VAL596 LYS597 ASN598 VAL599 LYS600 VAL601 ASP602 GLY603 LYS604 PRO605 VAL606 |
Unit 2 | ASP36 ALA37 PRO38 GLN39 GLN40 LEU41 GLN42 VAL43 PRO44 THR45 LEU46 ALA47 TYR48 ASP49 GLU50 SER51 SER52 ILE53 VAL54 LEU55 VAL56 TRP57 LYS58 ALA59 PRO60 GLU61 ASP62 THR63 ARG64 LYS65 ILE66 VAL67 ASP68 TYR69 GLN70 ILE71 PHE72 SER73 ALA74 GLY75 LYS76 LEU77 LEU78 GLY79 LYS80 ALA81 SER82 ASP83 ASN84 ASN85 ASP86 ASN87 PHE88 SER89 PRO90 ALA91 LYS92 PRO93 TYR94 ILE95 ASP96 HIS97 PHE98 TYR99 VAL100 ASN101 ASP102 LYS103 ASP104 ASN105 PHE106 GLN107 HIS108 LYS109 ILE110 VAL111 MET112 GLN113 ASN114 PHE115 THR116 VAL117 ILE118 GLY119 LEU120 LYS121 PRO122 GLU123 THR124 SER125 TYR126 GLN127 PHE128 THR129 VAL130 LYS131 ALA132 GLN133 TYR134 ALA135 ASP136 GLY137 SER138 LEU139 SER140 VAL141 ALA142 SER143 LYS144 PRO145 ILE146 THR147 ALA148 LYS149 THR150 SER151 ALA152 LYS153 PRO154 GLN155 ILE156 VAL157 ASN158 VAL159 ARG160 ASP161 PHE162 GLY163 ALA164 ILE165 ASP166 ASP167 GLY168 LYS169 THR170 LEU171 ASN172 THR173 LYS174 ALA175 ILE176 GLN177 GLN178 ALA179 ILE180 ASP181 SER182 CYS183 LYS184 PRO185 GLY186 CYS187 ARG188 VAL189 GLU190 ILE191 PRO192 ALA193 GLY194 THR195 TYR196 LYS197 SER198 GLY199 ALA200 LEU201 TRP202 LEU203 LYS204 SER205 ASP206 MET207 THR208 LEU209 ASN210 LEU211 GLN212 ALA213 GLY214 ALA215 ILE216 LEU217 LEU218 GLY219 SER220 GLU221 ASN222 PRO223 ASP224 ASP225 TYR226 PRO227 ALA228 GLY229 TYR230 ARG231 LEU232 TYR233 PRO234 TYR235 SER236 THR237 ILE238 GLU239 ARG240 PRO241 ALA242 SER243 LEU244 ILE245 ASN246 ALA247 ILE248 ASP249 PRO250 ASN251 ASN252 SER253 LYS254 PRO255 GLY256 THR257 PHE258 ARG259 ASN260 ILE261 ARG262 ILE263 THR264 GLY265 SER266 GLY267 VAL268 ILE269 ASP270 GLY271 ASN272 GLY273 TRP274 LEU275 ARG276 ALA277 LYS278 THR279 ALA280 GLU281 ILE282 THR283 ASP284 GLU285 LEU286 GLY287 ARG288 SER289 LEU290 PRO291 GLN292 TYR293 VAL294 ALA295 SER296 LYS297 ASN298 SER299 LYS300 VAL301 HIS302 GLU303 ASP304 GLY305 ILE306 LEU307 ALA308 LYS309 ASN310 GLN311 VAL312 GLU313 LYS314 ALA315 VAL316 SER317 ASP318 GLY319 MET320 ASP321 LEU322 LYS323 ASN324 ALA325 TYR326 GLY327 GLN328 ARG329 ARG330 SER331 SER332 LEU333 MET334 THR335 LEU336 ARG337 GLY338 VAL339 GLU340 ASN341 VAL342 TYR343 LEU344 ALA345 GLY346 PHE347 THR348 VAL349 ARG350 ASN351 PRO352 ALA353 PHE354 HIS355 GLY356 ILE357 MET358 ASN359 LEU360 GLU361 ASN362 HIS363 ASN364 VAL365 VAL366 ALA367 ASN368 GLY369 LEU370 ILE371 HIS372 GLN373 THR374 TYR375 ASP376 ALA377 ASN378 ASN379 GLY380 ASP381 GLY382 ILE383 GLU384 PHE385 GLY386 ASN387 SER388 GLN389 ASN390 VAL391 MET392 VAL393 PHE394 ASN395 ASN396 PHE397 PHE398 ASP399 THR400 GLY401 ASP402 ASP403 CYS404 ILE405 ASN406 PHE407 ALA408 ALA409 GLY410 THR411 GLY412 GLU413 LYS414 ALA415 GLN416 GLU417 GLN418 GLU419 PRO420 MET421 LYS422 GLY423 ALA424 TRP425 LEU426 PHE427 ASN428 ASN429 TYR430 PHE431 ARG432 MET433 GLY434 HIS435 GLY436 ALA437 ILE438 VAL439 THR440 GLY441 SER442 HIS443 THR444 GLY445 ALA446 TRP447 ILE448 GLU449 ASP450 ILE451 LEU452 ALA453 GLU454 ASN455 ASN456 VAL457 MET458 TYR459 LEU460 THR461 ASP462 ILE463 GLY464 LEU465 ARG466 ALA467 LYS468 SER469 THR470 SER471 THR472 ILE473 GLY474 GLY475 GLY476 ALA477 ARG478 ASN479 VAL480 THR481 PHE482 ARG483 ASN484 ASN485 ALA486 MET487 ARG488 ASP489 LEU490 ALA491 LYS492 GLN493 VAL494 MET495 VAL496 MET497 THR498 LEU499 ASP500 TYR501 ALA502 ILE508 ASP509 TYR510 PRO511 PRO512 ALA513 LYS514 ILE515 PRO516 ALA517 GLN518 PHE519 TYR520 ASP521 PHE522 THR523 LEU524 LYS525 ASN526 VAL527 THR528 VAL529 ASP530 ASN531 SER532 THR533 GLY534 LYS535 ASN536 PRO537 SER538 ILE539 GLU540 ILE541 LYS542 GLY543 ASP544 THR545 ALA546 ASN547 LYS548 ALA549 TRP550 HIS551 ARG552 LEU553 VAL554 HIS555 VAL556 ASN557 ASN558 VAL559 GLN560 LEU561 ASN562 ASN563 VAL564 THR565 PRO566 THR567 ALA568 ILE569 SER570 ASP571 LEU572 ARG573 ASP574 SER575 GLU576 PHE577 ASN578 LYS579 VAL580 THR581 PHE582 THR583 GLU584 LEU585 ARG586 GLY587 ASP588 THR589 PRO590 TRP591 HIS592 PHE593 SER594 GLU595 VAL596 LYS597 ASN598 VAL599 LYS600 VAL601 ASP602 GLY603 LYS604 PRO605 VAL606 |
Unit 3 | NI1607 NI1608 NI1609 NI1610 SO41611 SO41612 SO41613 SO41614 SO41615 SO41616 SO41617 SO41618 SO41619 SO41620 SO41621 |
Unit 4 | NI1607 NI1608 NI1609 NI1610 NI1611 SO41612 SO41613 SO41614 SO41615 SO41616 SO41617 SO41618 SO41619 ACT1620 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |