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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF RNA-BINDING DOMAIN 3 OF CUGBP1 IN COMPLEX WITH RNA (UG)3
Keywords RRM DOMAIN, RBD, PROTEIN-RNA COMPLEX, TRANSCRIPTION/RNA COMPLEX, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, ACTIVATOR, ALTERNATIVE SPLICING, CYTOPLASM, MRNA PROCESSING, NUCLEUS, PHOSPHOPROTEIN, RNA-BINDING
Experiment NMR
Number of Models  20


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2RQC     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CUG-BP- AND ETR-3-LIKE FACTOR 1  A 115 1708 0
2  RNA    B 6 191 0
total       121 1899 0

Proteins
Unit 1 GLY376 SER377 SER378 GLY379 SER380 SER381 GLY382 LEU383 THR384 GLN385 GLN386 SER387 ILE388 GLY389 ALA390 ALA391 GLY392 SER393 GLN394 LYS395 GLU396 GLY397 PRO398 GLU399 GLY400 ALA401 ASN402 LEU403 PHE404 ILE405 TYR406 HIS407 LEU408 PRO409 GLN410 GLU411 PHE412 GLY413 ASP414 GLN415 ASP416 LEU417 LEU418 GLN419 MET420 PHE421 MET422 PRO423 PHE424 GLY425 ASN426 VAL427 VAL428 SER429 ALA430 LYS431 VAL432 PHE433 ILE434 ASP435 LYS436 GLN437 THR438 ASN439 LEU440 SER441 LYS442 CYS443 PHE444 GLY445 PHE446 VAL447 SER448 TYR449 ASP450 ASN451 PRO452 VAL453 SER454 ALA455 GLN456 ALA457 ALA458 ILE459 GLN460 SER461 MET462 ASN463 GLY464 PHE465 GLN466 ILE467 GLY468 MET469 LYS470 ARG471 LEU472 LYS473 VAL474 GLN475 LEU476 LYS477 ARG478 SER479 LYS480 ASN481 ASP482 SER483 LYS484 SER485 GLY486 PRO487 SER488 SER489 GLY490

Nucleic acids
Unit 2 U491 G492 U493 G494 U495 G496

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany