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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BIOSYNTHETIC ALAINE RACEMASE IN D- CYCLOSERINE-BOUND FORM FROM ESCHERICHIA COLI
Keywords ALPHA/BETA BARREL, CELL SHAPE, CELL WALL BIOGENESIS/DEGRADATION, ISOMERASE, PEPTIDOGLYCAN SYNTHESIS, PYRIDOXAL PHOSPHATE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2RJH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALANINE RACEMASE  A 359 2742 12
2  Protein   ALANINE RACEMASE  B 359 2742 12
3  Protein   ALANINE RACEMASE  C 353 2692 12
4  Protein   ALANINE RACEMASE  D 357 2725 12
5  Ligand   ALANINE RACEMASE  A 3 0 32
6  Ligand   ALANINE RACEMASE  B 3 0 32
7  Ligand   ALANINE RACEMASE  C 3 0 32
8  Ligand   ALANINE RACEMASE  D 1 0 22
9 Water     566 0 566
total       2004 10901 732
Proteins
Unit 1 MET1 GLN2 ALA3 ALA4 THR5 VAL6 VAL7 ILE8 ASN9 ARG10 ARG11 ALA12 LEU13 ARG14 HIS15 ASN16 LEU17 GLN18 ARG19 LEU20 ARG21 GLU22 LEU23 ALA24 PRO25 ALA26 SER27 LYS28 MET29 VAL30 ALA31 VAL32 VAL33 LYS34 ALA35 ASN36 ALA37 TYR38 GLY39 HIS40 GLY41 LEU42 LEU43 GLU44 THR45 ALA46 ARG47 THR48 LEU49 PRO50 ASP51 ALA52 ASP53 ALA54 PHE55 GLY56 VAL57 ALA58 ARG59 LEU60 GLU61 GLU62 ALA63 LEU64 ARG65 LEU66 ARG67 ALA68 GLY69 GLY70 ILE71 THR72 LYS73 PRO74 VAL75 LEU76 LEU77 LEU78 GLU79 GLY80 PHE81 PHE82 ASP83 ALA84 ARG85 ASP86 LEU87 PRO88 THR89 ILE90 SER91 ALA92 GLN93 HIS94 PHE95 HIS96 THR97 ALA98 VAL99 HIS100 ASN101 GLU102 GLU103 GLN104 LEU105 ALA106 ALA107 LEU108 GLU109 GLU110 ALA111 SER112 LEU113 ASP114 GLU115 PRO116 VAL117 THR118 VAL119 TRP120 MET121 KCX122 LEU123 ASP124 THR125 GLY126 MET127 HIS128 ARG129 LEU130 GLY131 VAL132 ARG133 PRO134 GLU135 GLN136 ALA137 GLU138 ALA139 PHE140 TYR141 HIS142 ARG143 LEU144 THR145 GLN146 CYS147 LYS148 ASN149 VAL150 ARG151 GLN152 PRO153 VAL154 ASN155 ILE156 VAL157 SER158 HIS159 PHE160 ALA161 ARG162 ALA163 ASP164 GLU165 PRO166 LYS167 CYS168 GLY169 ALA170 THR171 GLU172 LYS173 GLN174 LEU175 ALA176 ILE177 PHE178 ASN179 THR180 PHE181 CYS182 GLU183 GLY184 LYS185 PRO186 GLY187 GLN188 ARG189 SER190 ILE191 ALA192 ALA193 SER194 GLY195 GLY196 ILE197 LEU198 LEU199 TRP200 PRO201 GLN202 SER203 HIS204 PHE205 ASP206 TRP207 VAL208 ARG209 PRO210 GLY211 ILE212 ILE213 LEU214 TYR215 GLY216 VAL217 SER218 PRO219 LEU220 GLU221 ASP222 ARG223 SER224 THR225 GLY226 ALA227 ASP228 PHE229 GLY230 CYS231 GLN232 PRO233 VAL234 MET235 SER236 LEU237 THR238 SER239 SER240 LEU241 ILE242 ALA243 VAL244 ARG245 GLU246 HIS247 LYS248 ALA249 GLY250 GLU251 PRO252 VAL253 GLY254 TYR255 GLY256 GLY257 THR258 TRP259 VAL260 SER261 GLU262 ARG263 ASP264 THR265 ARG266 LEU267 GLY268 VAL269 VAL270 ALA271 MET272 GLY273 TYR274 GLY275 ASP276 GLY277 TYR278 PRO279 ARG280 ALA281 ALA282 PRO283 SER284 GLY285 THR286 PRO287 VAL288 LEU289 VAL290 ASN291 GLY292 ARG293 GLU294 VAL295 PRO296 ILE297 VAL298 GLY299 ARG300 VAL301 ALA302 MET303 ASP304 MET305 ILE306 CYS307 VAL308 ASP309 LEU310 GLY311 PRO312 GLN313 ALA314 GLN315 ASP316 LYS317 ALA318 GLY319 ASP320 PRO321 VAL322 ILE323 LEU324 TRP325 GLY326 GLU327 GLY328 LEU329 PRO330 VAL331 GLU332 ARG333 ILE334 ALA335 GLU336 MET337 THR338 LYS339 VAL340 SER341 ALA342 TYR343 GLU344 LEU345 ILE346 THR347 ARG348 LEU349 THR350 SER351 ARG352 VAL353 ALA354 MET355 LYS356 TYR357 VAL358 ASP359
Unit 2 MET1 GLN2 ALA3 ALA4 THR5 VAL6 VAL7 ILE8 ASN9 ARG10 ARG11 ALA12 LEU13 ARG14 HIS15 ASN16 LEU17 GLN18 ARG19 LEU20 ARG21 GLU22 LEU23 ALA24 PRO25 ALA26 SER27 LYS28 MET29 VAL30 ALA31 VAL32 VAL33 LYS34 ALA35 ASN36 ALA37 TYR38 GLY39 HIS40 GLY41 LEU42 LEU43 GLU44 THR45 ALA46 ARG47 THR48 LEU49 PRO50 ASP51 ALA52 ASP53 ALA54 PHE55 GLY56 VAL57 ALA58 ARG59 LEU60 GLU61 GLU62 ALA63 LEU64 ARG65 LEU66 ARG67 ALA68 GLY69 GLY70 ILE71 THR72 LYS73 PRO74 VAL75 LEU76 LEU77 LEU78 GLU79 GLY80 PHE81 PHE82 ASP83 ALA84 ARG85 ASP86 LEU87 PRO88 THR89 ILE90 SER91 ALA92 GLN93 HIS94 PHE95 HIS96 THR97 ALA98 VAL99 HIS100 ASN101 GLU102 GLU103 GLN104 LEU105 ALA106 ALA107 LEU108 GLU109 GLU110 ALA111 SER112 LEU113 ASP114 GLU115 PRO116 VAL117 THR118 VAL119 TRP120 MET121 KCX122 LEU123 ASP124 THR125 GLY126 MET127 HIS128 ARG129 LEU130 GLY131 VAL132 ARG133 PRO134 GLU135 GLN136 ALA137 GLU138 ALA139 PHE140 TYR141 HIS142 ARG143 LEU144 THR145 GLN146 CYS147 LYS148 ASN149 VAL150 ARG151 GLN152 PRO153 VAL154 ASN155 ILE156 VAL157 SER158 HIS159 PHE160 ALA161 ARG162 ALA163 ASP164 GLU165 PRO166 LYS167 CYS168 GLY169 ALA170 THR171 GLU172 LYS173 GLN174 LEU175 ALA176 ILE177 PHE178 ASN179 THR180 PHE181 CYS182 GLU183 GLY184 LYS185 PRO186 GLY187 GLN188 ARG189 SER190 ILE191 ALA192 ALA193 SER194 GLY195 GLY196 ILE197 LEU198 LEU199 TRP200 PRO201 GLN202 SER203 HIS204 PHE205 ASP206 TRP207 VAL208 ARG209 PRO210 GLY211 ILE212 ILE213 LEU214 TYR215 GLY216 VAL217 SER218 PRO219 LEU220 GLU221 ASP222 ARG223 SER224 THR225 GLY226 ALA227 ASP228 PHE229 GLY230 CYS231 GLN232 PRO233 VAL234 MET235 SER236 LEU237 THR238 SER239 SER240 LEU241 ILE242 ALA243 VAL244 ARG245 GLU246 HIS247 LYS248 ALA249 GLY250 GLU251 PRO252 VAL253 GLY254 TYR255 GLY256 GLY257 THR258 TRP259 VAL260 SER261 GLU262 ARG263 ASP264 THR265 ARG266 LEU267 GLY268 VAL269 VAL270 ALA271 MET272 GLY273 TYR274 GLY275 ASP276 GLY277 TYR278 PRO279 ARG280 ALA281 ALA282 PRO283 SER284 GLY285 THR286 PRO287 VAL288 LEU289 VAL290 ASN291 GLY292 ARG293 GLU294 VAL295 PRO296 ILE297 VAL298 GLY299 ARG300 VAL301 ALA302 MET303 ASP304 MET305 ILE306 CYS307 VAL308 ASP309 LEU310 GLY311 PRO312 GLN313 ALA314 GLN315 ASP316 LYS317 ALA318 GLY319 ASP320 PRO321 VAL322 ILE323 LEU324 TRP325 GLY326 GLU327 GLY328 LEU329 PRO330 VAL331 GLU332 ARG333 ILE334 ALA335 GLU336 MET337 THR338 LYS339 VAL340 SER341 ALA342 TYR343 GLU344 LEU345 ILE346 THR347 ARG348 LEU349 THR350 SER351 ARG352 VAL353 ALA354 MET355 LYS356 TYR357 VAL358 ASP359
Unit 3 ALA3 ALA4 THR5 VAL6 VAL7 ILE8 ASN9 ARG10 ARG11 ALA12 LEU13 ARG14 HIS15 ASN16 LEU17 GLN18 ARG19 LEU20 ARG21 GLU22 LEU23 ALA24 PRO25 ALA26 SER27 LYS28 MET29 VAL30 ALA31 VAL32 VAL33 LYS34 ALA35 ASN36 ALA37 TYR38 GLY39 HIS40 GLY41 LEU42 LEU43 GLU44 THR45 ALA46 ARG47 THR48 LEU49 PRO50 ASP51 ALA52 ASP53 ALA54 PHE55 GLY56 VAL57 ALA58 ARG59 LEU60 GLU61 GLU62 ALA63 LEU64 ARG65 LEU66 ARG67 ALA68 GLY69 GLY70 ILE71 THR72 LYS73 PRO74 VAL75 LEU76 LEU77 LEU78 GLU79 GLY80 PHE81 PHE82 ASP83 ALA84 ARG85 ASP86 LEU87 PRO88 THR89 ILE90 SER91 ALA92 GLN93 HIS94 PHE95 HIS96 THR97 ALA98 VAL99 HIS100 ASN101 GLU102 GLU103 GLN104 LEU105 ALA106 ALA107 LEU108 GLU109 GLU110 ALA111 SER112 LEU113 ASP114 GLU115 PRO116 VAL117 THR118 VAL119 TRP120 MET121 KCX122 LEU123 ASP124 THR125 GLY126 MET127 HIS128 ARG129 LEU130 GLY131 VAL132 ARG133 PRO134 GLU135 GLN136 ALA137 GLU138 ALA139 PHE140 TYR141 HIS142 ARG143 LEU144 THR145 GLN146 CYS147 LYS148 ASN149 VAL150 ARG151 GLN152 PRO153 VAL154 ASN155 ILE156 VAL157 SER158 HIS159 PHE160 ALA161 ARG162 ALA163 ASP164 GLU165 PRO166 LYS167 CYS168 GLY169 ALA170 THR171 GLU172 LYS173 GLN174 LEU175 ALA176 ILE177 PHE178 ASN179 THR180 PHE181 CYS182 GLU183 GLY184 LYS185 PRO186 GLY187 GLN188 ARG189 SER190 ILE191 ALA192 ALA193 SER194 GLY195 GLY196 ILE197 LEU198 LEU199 TRP200 PRO201 GLN202 SER203 HIS204 PHE205 ASP206 TRP207 VAL208 ARG209 PRO210 GLY211 ILE212 ILE213 LEU214 TYR215 GLY216 VAL217 SER218 PRO219 LEU220 GLU221 ASP222 ARG223 SER224 THR225 GLY226 ALA227 ASP228 PHE229 GLY230 CYS231 GLN232 PRO233 VAL234 MET235 SER236 LEU237 THR238 SER239 SER240 LEU241 ILE242 ALA243 VAL244 ARG245 GLU246 HIS247 LYS248 ALA249 GLY250 GLU251 PRO252 VAL253 GLY254 TYR255 GLY256 GLY257 THR258 TRP259 VAL260 SER261 GLU262 ARG263 ASP264 THR265 ARG266 LEU267 GLY268 VAL269 VAL270 ALA271 MET272 GLY273 TYR274 GLY275 ASP276 GLY277 TYR278 PRO279 ARG280 ALA281 ALA282 PRO283 SER284 GLY285 THR286 PRO287 VAL288 LEU289 VAL290 ASN291 GLY292 ARG293 GLU294 VAL295 PRO296 ILE297 VAL298 GLY299 ARG300 VAL301 ALA302 MET303 ASP304 MET305 ILE306 CYS307 VAL308 ASP309 LEU310 GLY311 PRO312 GLN313 ALA314 GLN315 ASP316 LYS317 ALA318 GLY319 ASP320 PRO321 VAL322 ILE323 LEU324 TRP325 GLY326 GLU327 GLY328 LEU329 PRO330 VAL331 GLU332 MET337 THR338 LYS339 VAL340 SER341 ALA342 TYR343 GLU344 LEU345 ILE346 THR347 ARG348 LEU349 THR350 SER351 ARG352 VAL353 ALA354 MET355 LYS356 TYR357 VAL358 ASP359
Unit 4 ALA3 ALA4 THR5 VAL6 VAL7 ILE8 ASN9 ARG10 ARG11 ALA12 LEU13 ARG14 HIS15 ASN16 LEU17 GLN18 ARG19 LEU20 ARG21 GLU22 LEU23 ALA24 PRO25 ALA26 SER27 LYS28 MET29 VAL30 ALA31 VAL32 VAL33 LYS34 ALA35 ASN36 ALA37 TYR38 GLY39 HIS40 GLY41 LEU42 LEU43 GLU44 THR45 ALA46 ARG47 THR48 LEU49 PRO50 ASP51 ALA52 ASP53 ALA54 PHE55 GLY56 VAL57 ALA58 ARG59 LEU60 GLU61 GLU62 ALA63 LEU64 ARG65 LEU66 ARG67 ALA68 GLY69 GLY70 ILE71 THR72 LYS73 PRO74 VAL75 LEU76 LEU77 LEU78 GLU79 GLY80 PHE81 PHE82 ASP83 ALA84 ARG85 ASP86 LEU87 PRO88 THR89 ILE90 SER91 ALA92 GLN93 HIS94 PHE95 HIS96 THR97 ALA98 VAL99 HIS100 ASN101 GLU102 GLU103 GLN104 LEU105 ALA106 ALA107 LEU108 GLU109 GLU110 ALA111 SER112 LEU113 ASP114 GLU115 PRO116 VAL117 THR118 VAL119 TRP120 MET121 KCX122 LEU123 ASP124 THR125 GLY126 MET127 HIS128 ARG129 LEU130 GLY131 VAL132 ARG133 PRO134 GLU135 GLN136 ALA137 GLU138 ALA139 PHE140 TYR141 HIS142 ARG143 LEU144 THR145 GLN146 CYS147 LYS148 ASN149 VAL150 ARG151 GLN152 PRO153 VAL154 ASN155 ILE156 VAL157 SER158 HIS159 PHE160 ALA161 ARG162 ALA163 ASP164 GLU165 PRO166 LYS167 CYS168 GLY169 ALA170 THR171 GLU172 LYS173 GLN174 LEU175 ALA176 ILE177 PHE178 ASN179 THR180 PHE181 CYS182 GLU183 GLY184 LYS185 PRO186 GLY187 GLN188 ARG189 SER190 ILE191 ALA192 ALA193 SER194 GLY195 GLY196 ILE197 LEU198 LEU199 TRP200 PRO201 GLN202 SER203 HIS204 PHE205 ASP206 TRP207 VAL208 ARG209 PRO210 GLY211 ILE212 ILE213 LEU214 TYR215 GLY216 VAL217 SER218 PRO219 LEU220 GLU221 ASP222 ARG223 SER224 THR225 GLY226 ALA227 ASP228 PHE229 GLY230 CYS231 GLN232 PRO233 VAL234 MET235 SER236 LEU237 THR238 SER239 SER240 LEU241 ILE242 ALA243 VAL244 ARG245 GLU246 HIS247 LYS248 ALA249 GLY250 GLU251 PRO252 VAL253 GLY254 TYR255 GLY256 GLY257 THR258 TRP259 VAL260 SER261 GLU262 ARG263 ASP264 THR265 ARG266 LEU267 GLY268 VAL269 VAL270 ALA271 MET272 GLY273 TYR274 GLY275 ASP276 GLY277 TYR278 PRO279 ARG280 ALA281 ALA282 PRO283 SER284 GLY285 THR286 PRO287 VAL288 LEU289 VAL290 ASN291 GLY292 ARG293 GLU294 VAL295 PRO296 ILE297 VAL298 GLY299 ARG300 VAL301 ALA302 MET303 ASP304 MET305 ILE306 CYS307 VAL308 ASP309 LEU310 GLY311 PRO312 GLN313 ALA314 GLN315 ASP316 LYS317 ALA318 GLY319 ASP320 PRO321 VAL322 ILE323 LEU324 TRP325 GLY326 GLU327 GLY328 LEU329 PRO330 VAL331 GLU332 ARG333 ILE334 ALA335 GLU336 MET337 THR338 LYS339 VAL340 SER341 ALA342 TYR343 GLU344 LEU345 ILE346 THR347 ARG348 LEU349 THR350 SER351 ARG352 VAL353 ALA354 MET355 LYS356 TYR357 VAL358 ASP359
Ligands
Unit 5 SO4360 SO4361 DCS362
Unit 6 SO4360 SO4361 DCS362
Unit 7 SO4360 SO4361 DCS362
Unit 8 DCS360
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany