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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE SYNTHASE FROM HAHEL CHEJUENSIS AT 1.5A RESOLUTION
Keywords BETA BARREL, AMINO-ACID BIOSYNTHESIS, DIAMINOPIMELATE BIOSYN LYASE, LYSINE BIOSYNTHESIS, SCHIFF BASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2RFG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIHYDRODIPICOLINATE SYNTHASE  A 289 2188 0
2  Protein   DIHYDRODIPICOLINATE SYNTHASE  B 297 2271 0
3  Protein   DIHYDRODIPICOLINATE SYNTHASE  C 289 2188 0
4  Protein   DIHYDRODIPICOLINATE SYNTHASE  D 289 2188 0
5  Ligand   DIHYDRODIPICOLINATE SYNTHASE  A 2 0 4
6 Water     1565 0 1565
total       2731 8835 1569

Proteins
Unit 1 MET1 PHE2 ARG3 GLY4 SER5 LEU6 ILE7 ALA8 MET9 ILE10 THR11 PRO12 PHE13 ILE14 ASN15 GLY16 GLN17 VAL18 ASP19 GLU20 LYS21 ALA22 LEU23 ALA24 GLY25 LEU26 VAL27 ASP28 TRP29 GLN30 ILE31 LYS32 HIS33 GLY34 ALA35 HIS36 GLY37 LEU38 VAL39 PRO40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 THR51 GLU52 GLU53 GLU54 HIS55 LYS56 ARG57 VAL58 VAL59 ALA60 LEU61 VAL62 ALA63 GLU64 GLN65 ALA66 GLN67 GLY68 ARG69 VAL70 PRO71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 ASN80 PRO81 VAL82 GLU83 ALA84 VAL85 ARG86 TYR87 ALA88 GLN89 HIS90 ALA91 GLN92 GLN93 ALA94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 CYS101 VAL102 ALA103 GLY104 TYR105 TYR106 ASN107 ARG108 PRO109 SER110 GLN111 GLU112 GLY113 LEU114 TYR115 GLN116 HIS117 PHE118 LYS119 MET120 VAL121 HIS122 ASP123 ALA124 ILE125 ASP126 ILE127 PRO128 ILE129 ILE130 VAL131 TYR132 ASN133 ILE134 PRO135 PRO136 ARG137 ALA138 VAL139 VAL140 ASP141 ILE142 LYS143 PRO144 GLU145 THR146 MET147 ALA148 ARG149 LEU150 ALA151 ALA152 LEU153 PRO154 ARG155 ILE156 VAL157 GLY158 VAL159 LYS160 ASP161 ALA162 THR163 THR164 ASP165 LEU166 ALA167 ARG168 ILE169 SER170 ARG171 GLU172 ARG173 MET174 LEU175 ILE176 ASN177 LYS178 PRO179 PHE180 SER181 PHE182 LEU183 SER184 GLY185 ASP186 ASP187 MET188 THR189 ALA190 ILE191 ALA192 TYR193 ASN194 ALA195 SER196 GLY197 GLY198 GLN199 GLY200 CYS201 ILE202 SER203 VAL204 SER205 ALA206 ASN207 ILE208 ALA209 PRO210 ALA211 LEU212 TYR213 GLY214 GLN215 MET216 GLN217 THR218 ALA219 THR220 LEU221 GLN222 GLY223 ASP224 PHE225 ARG226 GLU227 ALA228 LEU229 ARG230 ILE231 HIS232 ASP233 LEU234 LEU235 ALA236 PRO237 LEU238 HIS239 GLU240 ALA241 LEU242 PHE243 ARG244 GLU245 PRO246 SER247 PRO248 ALA249 GLY250 ALA251 LYS252 TYR253 ALA254 ALA255 SER256 LEU257 LEU258 GLY259 LEU260 CYS261 ASN262 GLU263 GLU264 CYS265 ARG266 LEU267 PRO268 ILE269 VAL270 PRO271 LEU272 SER273 GLU274 GLN275 THR276 LYS277 SER278 ASP279 ILE280 LYS281 ASN282 ILE283 ILE284 ASN285 GLU286 LEU287 TYR288 ARG289
Unit 2 MET1 PHE2 ARG3 GLY4 SER5 LEU6 ILE7 ALA8 MET9 ILE10 THR11 PRO12 PHE13 ILE14 ASN15 GLY16 GLN17 VAL18 ASP19 GLU20 LYS21 ALA22 LEU23 ALA24 GLY25 LEU26 VAL27 ASP28 TRP29 GLN30 ILE31 LYS32 HIS33 GLY34 ALA35 HIS36 GLY37 LEU38 VAL39 PRO40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 THR51 GLU52 GLU53 GLU54 HIS55 LYS56 ARG57 VAL58 VAL59 ALA60 LEU61 VAL62 ALA63 GLU64 GLN65 ALA66 GLN67 GLY68 ARG69 VAL70 PRO71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 ASN80 PRO81 VAL82 GLU83 ALA84 VAL85 ARG86 TYR87 ALA88 GLN89 HIS90 ALA91 GLN92 GLN93 ALA94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 CYS101 VAL102 ALA103 GLY104 TYR105 TYR106 ASN107 ARG108 PRO109 SER110 GLN111 GLU112 GLY113 LEU114 TYR115 GLN116 HIS117 PHE118 LYS119 MET120 VAL121 HIS122 ASP123 ALA124 ILE125 ASP126 ILE127 PRO128 ILE129 ILE130 VAL131 TYR132 ASN133 ILE134 PRO135 PRO136 ARG137 ALA138 VAL139 VAL140 ASP141 ILE142 LYS143 PRO144 GLU145 THR146 MET147 ALA148 ARG149 LEU150 ALA151 ALA152 LEU153 PRO154 ARG155 ILE156 VAL157 GLY158 VAL159 LYS160 ASP161 ALA162 THR163 THR164 ASP165 LEU166 ALA167 ARG168 ILE169 SER170 ARG171 GLU172 ARG173 MET174 LEU175 ILE176 ASN177 LYS178 PRO179 PHE180 SER181 PHE182 LEU183 SER184 GLY185 ASP186 ASP187 MET188 THR189 ALA190 ILE191 ALA192 TYR193 ASN194 ALA195 SER196 GLY197 GLY198 GLN199 GLY200 CYS201 ILE202 SER203 VAL204 SER205 ALA206 ASN207 ILE208 ALA209 PRO210 ALA211 LEU212 TYR213 GLY214 GLN215 MET216 GLN217 THR218 ALA219 THR220 LEU221 GLN222 GLY223 ASP224 PHE225 ARG226 GLU227 ALA228 LEU229 ARG230 ILE231 HIS232 ASP233 LEU234 LEU235 ALA236 PRO237 LEU238 HIS239 GLU240 ALA241 LEU242 PHE243 ARG244 GLU245 PRO246 SER247 PRO248 ALA249 GLY250 ALA251 LYS252 TYR253 ALA254 ALA255 SER256 LEU257 LEU258 GLY259 LEU260 CYS261 ASN262 GLU263 GLU264 CYS265 ARG266 LEU267 PRO268 ILE269 VAL270 PRO271 LEU272 SER273 GLU274 GLN275 THR276 LYS277 SER278 ASP279 ILE280 LYS281 ASN282 ILE283 ILE284 ASN285 GLU286 LEU287 TYR288 ARG289 LEU290 GLU291 HIS292 HIS293 HIS294 HIS295 HIS296 HIS297
Unit 3 MET1 PHE2 ARG3 GLY4 SER5 LEU6 ILE7 ALA8 MET9 ILE10 THR11 PRO12 PHE13 ILE14 ASN15 GLY16 GLN17 VAL18 ASP19 GLU20 LYS21 ALA22 LEU23 ALA24 GLY25 LEU26 VAL27 ASP28 TRP29 GLN30 ILE31 LYS32 HIS33 GLY34 ALA35 HIS36 GLY37 LEU38 VAL39 PRO40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 THR51 GLU52 GLU53 GLU54 HIS55 LYS56 ARG57 VAL58 VAL59 ALA60 LEU61 VAL62 ALA63 GLU64 GLN65 ALA66 GLN67 GLY68 ARG69 VAL70 PRO71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 ASN80 PRO81 VAL82 GLU83 ALA84 VAL85 ARG86 TYR87 ALA88 GLN89 HIS90 ALA91 GLN92 GLN93 ALA94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 CYS101 VAL102 ALA103 GLY104 TYR105 TYR106 ASN107 ARG108 PRO109 SER110 GLN111 GLU112 GLY113 LEU114 TYR115 GLN116 HIS117 PHE118 LYS119 MET120 VAL121 HIS122 ASP123 ALA124 ILE125 ASP126 ILE127 PRO128 ILE129 ILE130 VAL131 TYR132 ASN133 ILE134 PRO135 PRO136 ARG137 ALA138 VAL139 VAL140 ASP141 ILE142 LYS143 PRO144 GLU145 THR146 MET147 ALA148 ARG149 LEU150 ALA151 ALA152 LEU153 PRO154 ARG155 ILE156 VAL157 GLY158 VAL159 LYS160 ASP161 ALA162 THR163 THR164 ASP165 LEU166 ALA167 ARG168 ILE169 SER170 ARG171 GLU172 ARG173 MET174 LEU175 ILE176 ASN177 LYS178 PRO179 PHE180 SER181 PHE182 LEU183 SER184 GLY185 ASP186 ASP187 MET188 THR189 ALA190 ILE191 ALA192 TYR193 ASN194 ALA195 SER196 GLY197 GLY198 GLN199 GLY200 CYS201 ILE202 SER203 VAL204 SER205 ALA206 ASN207 ILE208 ALA209 PRO210 ALA211 LEU212 TYR213 GLY214 GLN215 MET216 GLN217 THR218 ALA219 THR220 LEU221 GLN222 GLY223 ASP224 PHE225 ARG226 GLU227 ALA228 LEU229 ARG230 ILE231 HIS232 ASP233 LEU234 LEU235 ALA236 PRO237 LEU238 HIS239 GLU240 ALA241 LEU242 PHE243 ARG244 GLU245 PRO246 SER247 PRO248 ALA249 GLY250 ALA251 LYS252 TYR253 ALA254 ALA255 SER256 LEU257 LEU258 GLY259 LEU260 CYS261 ASN262 GLU263 GLU264 CYS265 ARG266 LEU267 PRO268 ILE269 VAL270 PRO271 LEU272 SER273 GLU274 GLN275 THR276 LYS277 SER278 ASP279 ILE280 LYS281 ASN282 ILE283 ILE284 ASN285 GLU286 LEU287 TYR288 ARG289
Unit 4 MET1 PHE2 ARG3 GLY4 SER5 LEU6 ILE7 ALA8 MET9 ILE10 THR11 PRO12 PHE13 ILE14 ASN15 GLY16 GLN17 VAL18 ASP19 GLU20 LYS21 ALA22 LEU23 ALA24 GLY25 LEU26 VAL27 ASP28 TRP29 GLN30 ILE31 LYS32 HIS33 GLY34 ALA35 HIS36 GLY37 LEU38 VAL39 PRO40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 THR51 GLU52 GLU53 GLU54 HIS55 LYS56 ARG57 VAL58 VAL59 ALA60 LEU61 VAL62 ALA63 GLU64 GLN65 ALA66 GLN67 GLY68 ARG69 VAL70 PRO71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 ASN80 PRO81 VAL82 GLU83 ALA84 VAL85 ARG86 TYR87 ALA88 GLN89 HIS90 ALA91 GLN92 GLN93 ALA94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 CYS101 VAL102 ALA103 GLY104 TYR105 TYR106 ASN107 ARG108 PRO109 SER110 GLN111 GLU112 GLY113 LEU114 TYR115 GLN116 HIS117 PHE118 LYS119 MET120 VAL121 HIS122 ASP123 ALA124 ILE125 ASP126 ILE127 PRO128 ILE129 ILE130 VAL131 TYR132 ASN133 ILE134 PRO135 PRO136 ARG137 ALA138 VAL139 VAL140 ASP141 ILE142 LYS143 PRO144 GLU145 THR146 MET147 ALA148 ARG149 LEU150 ALA151 ALA152 LEU153 PRO154 ARG155 ILE156 VAL157 GLY158 VAL159 LYS160 ASP161 ALA162 THR163 THR164 ASP165 LEU166 ALA167 ARG168 ILE169 SER170 ARG171 GLU172 ARG173 MET174 LEU175 ILE176 ASN177 LYS178 PRO179 PHE180 SER181 PHE182 LEU183 SER184 GLY185 ASP186 ASP187 MET188 THR189 ALA190 ILE191 ALA192 TYR193 ASN194 ALA195 SER196 GLY197 GLY198 GLN199 GLY200 CYS201 ILE202 SER203 VAL204 SER205 ALA206 ASN207 ILE208 ALA209 PRO210 ALA211 LEU212 TYR213 GLY214 GLN215 MET216 GLN217 THR218 ALA219 THR220 LEU221 GLN222 GLY223 ASP224 PHE225 ARG226 GLU227 ALA228 LEU229 ARG230 ILE231 HIS232 ASP233 LEU234 LEU235 ALA236 PRO237 LEU238 HIS239 GLU240 ALA241 LEU242 PHE243 ARG244 GLU245 PRO246 SER247 PRO248 ALA249 GLY250 ALA251 LYS252 TYR253 ALA254 ALA255 SER256 LEU257 LEU258 GLY259 LEU260 CYS261 ASN262 GLU263 GLU264 CYS265 ARG266 LEU267 PRO268 ILE269 VAL270 PRO271 LEU272 SER273 GLU274 GLN275 THR276 LYS277 SER278 ASP279 ILE280 LYS281 ASN282 ILE283 ILE284 ASN285 GLU286 LEU287 TYR288 ARG289

Ligands
Unit 5 MG298 EOH501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany