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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE EFFECTOR DOMAIN OF PLXNB1 BOUND WIT GTPASE
Keywords COMPLEX, STRUCTURAL GENOMICS CONSORTIUM, SGC, GTPASE, GNP, P EFFECTOR DOMAIN, GLYCOPROTEIN, MEMBRANE, PHOSPHORYLATION, R SECRETED, TRANSMEMBRANE, CYTOSKELETON, GTP-BINDING, LIPOPRO METHYLATION, NUCLEOTIDE-BINDING, PRENYLATION, SIGNALING PRO LIPOPROTEIN COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2REX     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PLEXIN-B1  A 107 808 0
2  Protein   RHO-RELATED GTP-BINDING PROTEIN RHO6  B 171 1304 0
3  Protein   PLEXIN-B1  C 107 806 0
4  Protein   RHO-RELATED GTP-BINDING PROTEIN RHO6  D 180 1361 0
5  Ligand   PLEXIN-B1  A 4 0 4
6  Ligand   RHO-RELATED GTP-BINDING PROTEIN RHO6  B 14 0 45
7  Ligand   PLEXIN-B1  C 5 0 5
8  Ligand   RHO-RELATED GTP-BINDING PROTEIN RHO6  D 13 0 44
9 Water     75 0 75
total       676 4279 173

Proteins
Unit 1 TYR1746 ARG1747 PRO1748 LEU1749 THR1750 LEU1751 ASN1752 ALA1753 LEU1754 LEU1755 ALA1756 VAL1757 GLY1758 PRO1759 GLY1760 ALA1761 GLY1762 GLU1763 ALA1764 GLN1765 GLY1766 VAL1767 PRO1768 VAL1769 LYS1770 VAL1771 LEU1772 ASP1773 CYS1774 ASP1775 THR1776 ILE1777 SER1778 GLN1779 ALA1780 LYS1781 GLU1782 LYS1783 MET1784 LEU1785 ASP1786 GLN1787 LEU1788 TYR1789 LYS1790 GLY1791 VAL1792 PRO1793 LEU1794 THR1795 GLN1796 ARG1797 PRO1798 ASP1799 PRO1800 ARG1801 THR1802 LEU1803 ASP1804 VAL1805 GLU1806 TRP1807 ARG1808 SER1809 GLY1810 VAL1811 ALA1812 GLY1813 HIS1814 LEU1815 ILE1816 LEU1817 SER1818 ASP1819 GLU1820 ASP1821 VAL1822 THR1823 SER1824 GLU1825 VAL1826 GLN1827 GLY1828 LEU1829 TRP1830 ARG1831 ARG1832 LEU1833 ASN1834 THR1835 LEU1836 GLN1837 HIS1838 TYR1839 LYS1840 VAL1841 PRO1842 ASP1843 GLY1844 ALA1845 THR1846 VAL1847 ALA1848 LEU1849 VAL1850 PRO1851 CYS1852
Unit 2 ARG13 CYS14 LYS15 LEU16 VAL17 LEU18 VAL19 GLY20 ASP21 VAL22 GLN23 CYS24 GLY25 LYS26 THR27 ALA28 MET29 LEU30 GLN31 VAL32 LEU33 ALA34 LYS35 ASP36 CYS37 TYR38 PRO39 GLU40 THR41 TYR42 VAL43 PRO44 THR45 VAL46 PHE47 GLU48 ASN49 TYR50 THR51 ALA52 CYS53 LEU54 GLU55 GLN59 ARG60 VAL61 GLU62 LEU63 SER64 LEU65 TRP66 ASP67 THR68 SER69 GLY70 SER71 PRO72 TYR73 TYR74 ASP75 ASN76 VAL77 ARG78 PRO79 LEU80 CYS81 TYR82 SER83 ASP84 SER85 ASP86 ALA87 VAL88 LEU89 LEU90 CYS91 PHE92 ASP93 ILE94 SER95 ARG96 PRO97 GLU98 THR99 VAL100 ALA103 LEU104 LYS105 LYS106 TRP107 ARG108 THR109 GLU110 ILE111 LEU112 ASP113 TYR114 CYS115 PRO116 SER117 THR118 ARG119 VAL120 LEU121 LEU122 ILE123 GLY124 CYS125 LYS126 THR127 ASP128 LEU129 ARG130 THR131 ASP132 LEU133 SER134 THR135 LEU136 MET137 GLU138 LEU139 SER140 HIS141 GLN142 LYS143 GLN144 ALA145 PRO146 ILE147 SER148 TYR149 GLU150 GLN151 GLY152 CYS153 ALA154 ILE155 ALA156 LYS157 GLN158 LEU159 GLY160 ALA161 GLU162 ILE163 TYR164 LEU165 GLU166 GLY167 SER168 ALA169 PHE170 THR171 SER172 GLU173 LYS174 SER175 ILE176 HIS177 SER178 ILE179 PHE180 ARG181 THR182 ALA183 SER184 MET185 LEU186 CYS187 LEU188
Unit 3 TYR1746 ARG1747 PRO1748 LEU1749 THR1750 LEU1751 ASN1752 ALA1753 LEU1754 LEU1755 ALA1756 VAL1757 GLY1758 PRO1759 GLY1760 ALA1761 GLY1762 GLU1763 ALA1764 GLN1765 GLY1766 VAL1767 PRO1768 VAL1769 LYS1770 VAL1771 LEU1772 ASP1773 CYS1774 ASP1775 THR1776 ILE1777 SER1778 GLN1779 ALA1780 LYS1781 GLU1782 LYS1783 MET1784 LEU1785 ASP1786 GLN1787 LEU1788 TYR1789 LYS1790 GLY1791 VAL1792 PRO1793 LEU1794 THR1795 GLN1796 ARG1797 PRO1798 ASP1799 PRO1800 ARG1801 THR1802 LEU1803 ASP1804 VAL1805 GLU1806 TRP1807 ARG1808 SER1809 GLY1810 VAL1811 ALA1812 GLY1813 HIS1814 LEU1815 ILE1816 LEU1817 SER1818 ASP1819 GLU1820 ASP1821 VAL1822 THR1823 SER1824 GLU1825 VAL1826 GLN1827 GLY1828 LEU1829 TRP1830 ARG1831 ARG1832 LEU1833 ASN1834 THR1835 LEU1836 GLN1837 HIS1838 TYR1839 LYS1840 VAL1841 PRO1842 ASP1843 GLY1844 ALA1845 THR1846 VAL1847 ALA1848 LEU1849 VAL1850 PRO1851 CYS1852
Unit 4 PRO7 GLN8 PRO9 VAL10 VAL11 ALA12 ARG13 CYS14 LYS15 LEU16 VAL17 LEU18 VAL19 GLY20 ASP21 VAL22 GLN23 CYS24 GLY25 LYS26 THR27 ALA28 MET29 LEU30 GLN31 VAL32 LEU33 ALA34 LYS35 ASP36 CYS37 TYR38 PRO39 GLU40 THR41 TYR42 VAL43 PRO44 THR45 VAL46 PHE47 GLU48 ASN49 TYR50 THR51 ALA52 CYS53 LEU54 GLU55 THR56 GLU57 GLU58 GLN59 ARG60 VAL61 GLU62 LEU63 SER64 LEU65 TRP66 ASP67 THR68 SER69 GLY70 SER71 PRO72 TYR73 TYR74 ASP75 ASN76 VAL77 ARG78 PRO79 LEU80 CYS81 TYR82 SER83 ASP84 SER85 ASP86 ALA87 VAL88 LEU89 LEU90 CYS91 PHE92 ASP93 ILE94 SER95 ARG96 PRO97 GLU98 THR99 VAL100 ALA103 LEU104 LYS105 LYS106 TRP107 ARG108 THR109 GLU110 ILE111 LEU112 ASP113 TYR114 CYS115 PRO116 SER117 THR118 ARG119 VAL120 LEU121 LEU122 ILE123 GLY124 CYS125 LYS126 THR127 ASP128 LEU129 ARG130 THR131 ASP132 LEU133 SER134 THR135 LEU136 MET137 GLU138 LEU139 SER140 HIS141 GLN142 LYS143 GLN144 ALA145 PRO146 ILE147 SER148 TYR149 GLU150 GLN151 GLY152 CYS153 ALA154 ILE155 ALA156 LYS157 GLN158 LEU159 GLY160 ALA161 GLU162 ILE163 TYR164 LEU165 GLU166 GLY167 SER168 ALA169 PHE170 THR171 SER172 GLU173 LYS174 SER175 ILE176 HIS177 SER178 ILE179 PHE180 ARG181 THR182 ALA183 SER184 MET185 LEU186 CYS187 LEU188

Ligands
Unit 5 UNX1 UNX5 UNX11 UNX30
Unit 6 GNP500 MG550 CA551 UNX552 UNX553 UNX554 UNX555 UNX556 UNX557 UNX558 UNX559 UNX560 UNX561 UNX562
Unit 7 UNX2 UNX3 UNX9 UNX20 UNX28
Unit 8 GNP500 MG550 CA551 UNX552 UNX553 UNX554 UNX555 UNX556 UNX557 UNX558 UNX559 UNX560 UNX561

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany