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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF HUMAN DDX25 RNA
Keywords RNA HELICASE, ROSSMANN FOLD, STRUCTURAL GENOMICS, STRUCTURAL CONSORTIUM, SGC, ALTERNATIVE INITIATION, ATP-BINDING, DEVEL PROTEIN, DIFFERENTIATION, HYDROLASE, MRNA TRANSPORT, NUCLEO BINDING, NUCLEUS, PHOSPHORYLATION, RNA-BINDING, SPERMATOGEN TRANSLATION REGULATION, TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2RB4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ATP-DEPENDENT RNA HELICASE DDX25  A 164 1316 0
2  Protein   ATP-DEPENDENT RNA HELICASE DDX25  B 163 1307 0
3  Ligand   ATP-DEPENDENT RNA HELICASE DDX25  A 4 0 8
4  Ligand   ATP-DEPENDENT RNA HELICASE DDX25  B 1 0 5
5 Water     5 0 5
total       337 2623 18

Proteins
Unit 1 LEU307 THR308 LEU309 ASN310 ASN311 ILE312 ARG313 GLN314 TYR315 TYR316 VAL317 LEU318 CYS319 GLU320 HIS321 ARG322 LYS323 ASP324 LYS325 TYR326 GLN327 ALA328 LEU329 CYS330 ASN331 ILE332 TYR333 GLY334 SER335 ILE336 THR337 ILE338 GLY339 GLN340 ALA341 ILE342 ILE343 PHE344 CYS345 GLN346 THR347 ARG348 ARG349 ASN350 ALA351 LYS352 TRP353 LEU354 THR355 VAL356 GLU357 MET358 ILE359 GLN360 ASP361 GLY362 HIS363 GLN364 VAL365 SER366 LEU367 LEU368 SER369 GLY370 GLU371 LEU372 THR373 VAL374 GLU375 GLN376 ARG377 ALA378 SER379 ILE380 ILE381 GLN382 ARG383 PHE384 ARG385 ASP386 GLY387 LYS388 GLU389 LYS390 VAL391 LEU392 ILE393 THR394 THR395 ASN396 VAL397 CYS398 ALA399 ARG400 GLY401 ILE402 ASP403 VAL404 LYS405 GLN406 VAL407 THR408 ILE409 VAL410 VAL411 ASN412 PHE413 ASP414 LEU415 PRO416 VAL417 GLY420 GLU421 GLU422 PRO423 ASP424 TYR425 GLU426 THR427 TYR428 LEU429 HIS430 ARG431 ILE432 GLY433 ARG434 THR435 LYS440 LYS441 GLY442 LEU443 ALA444 PHE445 ASN446 MET447 ILE448 GLU449 VAL450 ASP451 GLU452 LEU453 PRO454 SER455 LEU456 MET457 LYS458 ILE459 GLN460 ASP461 HIS462 PHE463 ASN464 SER465 SER466 ILE467 LYS468 GLN469 LEU470 ASN471 ALA472 GLU473 ASP474 MET475 ASP476
Unit 2 LEU307 THR308 LEU309 ASN310 ASN311 ILE312 ARG313 GLN314 TYR315 TYR316 VAL317 LEU318 CYS319 GLU320 HIS321 ARG322 LYS323 ASP324 LYS325 TYR326 GLN327 ALA328 LEU329 CYS330 ASN331 ILE332 TYR333 GLY334 SER335 ILE336 THR337 ILE338 GLY339 GLN340 ALA341 ILE342 ILE343 PHE344 CYS345 GLN346 THR347 ARG348 ARG349 ASN350 ALA351 LYS352 TRP353 LEU354 THR355 VAL356 GLU357 MET358 ILE359 GLN360 ASP361 GLY362 HIS363 GLN364 VAL365 SER366 LEU367 LEU368 SER369 GLY370 GLU371 LEU372 THR373 VAL374 GLU375 GLN376 ARG377 ALA378 SER379 ILE380 ILE381 GLN382 ARG383 PHE384 ARG385 ASP386 GLY387 LYS388 GLU389 LYS390 VAL391 LEU392 ILE393 THR394 THR395 ASN396 VAL397 CYS398 ALA399 ARG400 GLY401 ILE402 ASP403 VAL404 LYS405 GLN406 VAL407 THR408 ILE409 VAL410 VAL411 ASN412 PHE413 ASP414 LEU415 PRO416 VAL417 GLY420 GLU421 GLU422 PRO423 ASP424 TYR425 GLU426 THR427 TYR428 LEU429 HIS430 ARG431 ILE432 GLY433 ARG434 THR435 LYS441 GLY442 LEU443 ALA444 PHE445 ASN446 MET447 ILE448 GLU449 VAL450 ASP451 GLU452 LEU453 PRO454 SER455 LEU456 MET457 LYS458 ILE459 GLN460 ASP461 HIS462 PHE463 ASN464 SER465 SER466 ILE467 LYS468 GLN469 LEU470 ASN471 ALA472 GLU473 ASP474 MET475 ASP476

Ligands
Unit 3 CL1 CL2 SO4480 ZN481
Unit 4 SO41

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany