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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AMINOHYDROLASE FROM CAULOBACTER CRESCEN
Keywords AMINOHYDROLASE, STRUCTURAL GENOMICS, NYSGXRC, TARGET 9257A, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER STRUCTURAL GENOMICS, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2RAG     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIPEPTIDASE  A 369 2831 0
2  Protein   DIPEPTIDASE  B 369 2831 0
3  Protein   DIPEPTIDASE  C 369 2831 0
4  Protein   DIPEPTIDASE  D 369 2831 0
5  Ligand   DIPEPTIDASE  A 3 0 3
6  Ligand   DIPEPTIDASE  B 3 0 3
7  Ligand   DIPEPTIDASE  C 3 0 3
8  Ligand   DIPEPTIDASE  D 3 0 3
9 Water     524 0 524
total       2012 11324 536
Proteins
Unit 1 SER37 LYS38 ALA39 ASP40 LYS41 ALA42 LEU43 HIS44 ASP45 LYS46 PHE47 LEU48 THR49 LEU50 ASP51 THR52 HIS53 LEU54 ASP55 THR56 PRO57 ALA58 HIS59 PHE60 GLY61 ARG62 PRO63 GLY64 TRP65 ASP66 ILE67 ALA68 ASP69 HIS70 HIS71 GLU72 VAL73 GLU74 HIS75 ASP76 PHE77 SER78 GLN79 VAL80 ASP81 LEU82 PRO83 ARG84 MET85 ASN86 GLN87 GLY88 GLY89 LEU90 ASP91 GLY92 GLY93 PHE94 PHE95 VAL96 VAL97 TYR98 ILE99 GLY100 GLN101 GLY102 GLU103 LEU104 THR105 GLU106 LYS107 GLY108 TYR109 THR110 TYR111 ALA112 ARG113 ASP114 TYR115 ALA116 LEU117 HIS118 ARG119 THR120 ILE121 GLU122 ILE123 ARG124 GLU125 MET126 LEU127 ALA128 ALA129 ASN130 PRO131 ASP132 THR133 PHE134 GLU135 MET136 ALA137 LEU138 THR139 SER140 ASP141 ASP142 ALA143 ARG144 ARG145 ILE146 ALA147 LYS148 ALA149 GLY150 LYS151 LYS152 PHE153 ALA154 PHE155 VAL156 SER157 MET158 GLU159 ASN160 SER161 TRP162 PRO163 VAL164 GLY165 GLU166 ASP167 LEU168 SER169 LEU170 VAL171 GLU172 THR173 PHE174 TYR175 LYS176 GLU177 GLY178 LEU179 ARG180 MET181 ALA182 GLY183 PRO184 VAL185 HIS186 PHE187 ARG188 ASN189 ASN190 GLN191 LEU192 ALA193 ASP194 SER195 SER196 THR197 ASP198 PRO199 LYS200 GLY201 LYS202 ILE203 TRP204 ASN205 GLY206 TYR207 SER208 PRO209 LEU210 GLY211 LEU212 ARG213 TRP214 LEU215 ALA216 GLU217 ALA218 ASN219 ARG220 LEU221 GLY222 ILE223 VAL224 ILE225 ASP226 VAL227 SER228 HIS229 ALA230 SER231 ASP232 ASP233 VAL234 VAL235 ASP236 GLN237 SER238 VAL239 ALA240 LEU241 SER242 LYS243 ALA244 PRO245 ILE246 ILE247 ALA248 SER249 HIS250 SER251 GLY252 PRO253 LYS254 ALA255 VAL256 TYR257 ASP258 HIS259 PRO260 ARG261 ASN262 LEU263 ASP264 ASP265 ALA266 ARG267 LEU268 LYS269 LYS270 ILE271 ALA272 ASP273 ALA274 GLY275 GLY276 ALA277 ILE278 CYS279 ILE280 ASN281 SER282 ILE283 TYR284 LEU285 THR286 ASP287 THR288 THR289 PRO290 SER291 PRO292 GLU293 ALA304 PRO305 ASP306 MET307 LYS308 THR309 ALA310 THR311 PRO312 GLU313 ALA314 VAL315 LYS316 ALA317 TYR318 ALA319 ASP320 LYS321 ARG322 ALA323 ALA324 ILE325 ASP326 LYS327 ALA328 HIS329 PRO330 ALA331 ALA332 ARG333 GLY334 ASP335 PHE336 ASP337 LEU338 TYR339 MET340 LYS341 SER342 MET343 LEU344 HIS345 VAL346 LEU347 LYS348 VAL349 ALA350 GLY351 PRO352 LYS353 GLY354 VAL355 CYS356 VAL357 GLY358 ALA359 ASP360 TRP361 ASP362 GLY363 GLY364 GLY365 GLY366 MET367 ASP368 GLY369 PHE370 GLU371 ASP372 ILE373 THR374 ASP375 LEU376 PRO377 LYS378 ILE379 THR380 ALA381 ARG382 LEU383 LYS384 ALA385 GLU386 GLY387 TYR388 SER389 ASP390 ALA391 ASP392 ILE393 GLU394 ALA395 ILE396 TRP397 SER398 GLY399 ASN400 VAL401 LEU402 ARG403 ILE404 VAL405 ASP406 ALA407 ALA408 GLN409 ALA410 TYR411 ALA412 LYS413 SER414 VAL415
Unit 2 SER37 LYS38 ALA39 ASP40 LYS41 ALA42 LEU43 HIS44 ASP45 LYS46 PHE47 LEU48 THR49 LEU50 ASP51 THR52 HIS53 LEU54 ASP55 THR56 PRO57 ALA58 HIS59 PHE60 GLY61 ARG62 PRO63 GLY64 TRP65 ASP66 ILE67 ALA68 ASP69 HIS70 HIS71 GLU72 VAL73 GLU74 HIS75 ASP76 PHE77 SER78 GLN79 VAL80 ASP81 LEU82 PRO83 ARG84 MET85 ASN86 GLN87 GLY88 GLY89 LEU90 ASP91 GLY92 GLY93 PHE94 PHE95 VAL96 VAL97 TYR98 ILE99 GLY100 GLN101 GLY102 GLU103 LEU104 THR105 GLU106 LYS107 GLY108 TYR109 THR110 TYR111 ALA112 ARG113 ASP114 TYR115 ALA116 LEU117 HIS118 ARG119 THR120 ILE121 GLU122 ILE123 ARG124 GLU125 MET126 LEU127 ALA128 ALA129 ASN130 PRO131 ASP132 THR133 PHE134 GLU135 MET136 ALA137 LEU138 THR139 SER140 ASP141 ASP142 ALA143 ARG144 ARG145 ILE146 ALA147 LYS148 ALA149 GLY150 LYS151 LYS152 PHE153 ALA154 PHE155 VAL156 SER157 MET158 GLU159 ASN160 SER161 TRP162 PRO163 VAL164 GLY165 GLU166 ASP167 LEU168 SER169 LEU170 VAL171 GLU172 THR173 PHE174 TYR175 LYS176 GLU177 GLY178 LEU179 ARG180 MET181 ALA182 GLY183 PRO184 VAL185 HIS186 PHE187 ARG188 ASN189 ASN190 GLN191 LEU192 ALA193 ASP194 SER195 SER196 THR197 ASP198 PRO199 LYS200 GLY201 LYS202 ILE203 TRP204 ASN205 GLY206 TYR207 SER208 PRO209 LEU210 GLY211 LEU212 ARG213 TRP214 LEU215 ALA216 GLU217 ALA218 ASN219 ARG220 LEU221 GLY222 ILE223 VAL224 ILE225 ASP226 VAL227 SER228 HIS229 ALA230 SER231 ASP232 ASP233 VAL234 VAL235 ASP236 GLN237 SER238 VAL239 ALA240 LEU241 SER242 LYS243 ALA244 PRO245 ILE246 ILE247 ALA248 SER249 HIS250 SER251 GLY252 PRO253 LYS254 ALA255 VAL256 TYR257 ASP258 HIS259 PRO260 ARG261 ASN262 LEU263 ASP264 ASP265 ALA266 ARG267 LEU268 LYS269 LYS270 ILE271 ALA272 ASP273 ALA274 GLY275 GLY276 ALA277 ILE278 CYS279 ILE280 ASN281 SER282 ILE283 TYR284 LEU285 THR286 ASP287 THR288 THR289 PRO290 SER291 PRO292 GLU293 ALA304 PRO305 ASP306 MET307 LYS308 THR309 ALA310 THR311 PRO312 GLU313 ALA314 VAL315 LYS316 ALA317 TYR318 ALA319 ASP320 LYS321 ARG322 ALA323 ALA324 ILE325 ASP326 LYS327 ALA328 HIS329 PRO330 ALA331 ALA332 ARG333 GLY334 ASP335 PHE336 ASP337 LEU338 TYR339 MET340 LYS341 SER342 MET343 LEU344 HIS345 VAL346 LEU347 LYS348 VAL349 ALA350 GLY351 PRO352 LYS353 GLY354 VAL355 CYS356 VAL357 GLY358 ALA359 ASP360 TRP361 ASP362 GLY363 GLY364 GLY365 GLY366 MET367 ASP368 GLY369 PHE370 GLU371 ASP372 ILE373 THR374 ASP375 LEU376 PRO377 LYS378 ILE379 THR380 ALA381 ARG382 LEU383 LYS384 ALA385 GLU386 GLY387 TYR388 SER389 ASP390 ALA391 ASP392 ILE393 GLU394 ALA395 ILE396 TRP397 SER398 GLY399 ASN400 VAL401 LEU402 ARG403 ILE404 VAL405 ASP406 ALA407 ALA408 GLN409 ALA410 TYR411 ALA412 LYS413 SER414 VAL415
Unit 3 SER37 LYS38 ALA39 ASP40 LYS41 ALA42 LEU43 HIS44 ASP45 LYS46 PHE47 LEU48 THR49 LEU50 ASP51 THR52 HIS53 LEU54 ASP55 THR56 PRO57 ALA58 HIS59 PHE60 GLY61 ARG62 PRO63 GLY64 TRP65 ASP66 ILE67 ALA68 ASP69 HIS70 HIS71 GLU72 VAL73 GLU74 HIS75 ASP76 PHE77 SER78 GLN79 VAL80 ASP81 LEU82 PRO83 ARG84 MET85 ASN86 GLN87 GLY88 GLY89 LEU90 ASP91 GLY92 GLY93 PHE94 PHE95 VAL96 VAL97 TYR98 ILE99 GLY100 GLN101 GLY102 GLU103 LEU104 THR105 GLU106 LYS107 GLY108 TYR109 THR110 TYR111 ALA112 ARG113 ASP114 TYR115 ALA116 LEU117 HIS118 ARG119 THR120 ILE121 GLU122 ILE123 ARG124 GLU125 MET126 LEU127 ALA128 ALA129 ASN130 PRO131 ASP132 THR133 PHE134 GLU135 MET136 ALA137 LEU138 THR139 SER140 ASP141 ASP142 ALA143 ARG144 ARG145 ILE146 ALA147 LYS148 ALA149 GLY150 LYS151 LYS152 PHE153 ALA154 PHE155 VAL156 SER157 MET158 GLU159 ASN160 SER161 TRP162 PRO163 VAL164 GLY165 GLU166 ASP167 LEU168 SER169 LEU170 VAL171 GLU172 THR173 PHE174 TYR175 LYS176 GLU177 GLY178 LEU179 ARG180 MET181 ALA182 GLY183 PRO184 VAL185 HIS186 PHE187 ARG188 ASN189 ASN190 GLN191 LEU192 ALA193 ASP194 SER195 SER196 THR197 ASP198 PRO199 LYS200 GLY201 LYS202 ILE203 TRP204 ASN205 GLY206 TYR207 SER208 PRO209 LEU210 GLY211 LEU212 ARG213 TRP214 LEU215 ALA216 GLU217 ALA218 ASN219 ARG220 LEU221 GLY222 ILE223 VAL224 ILE225 ASP226 VAL227 SER228 HIS229 ALA230 SER231 ASP232 ASP233 VAL234 VAL235 ASP236 GLN237 SER238 VAL239 ALA240 LEU241 SER242 LYS243 ALA244 PRO245 ILE246 ILE247 ALA248 SER249 HIS250 SER251 GLY252 PRO253 LYS254 ALA255 VAL256 TYR257 ASP258 HIS259 PRO260 ARG261 ASN262 LEU263 ASP264 ASP265 ALA266 ARG267 LEU268 LYS269 LYS270 ILE271 ALA272 ASP273 ALA274 GLY275 GLY276 ALA277 ILE278 CYS279 ILE280 ASN281 SER282 ILE283 TYR284 LEU285 THR286 ASP287 THR288 THR289 PRO290 SER291 PRO292 GLU293 ALA304 PRO305 ASP306 MET307 LYS308 THR309 ALA310 THR311 PRO312 GLU313 ALA314 VAL315 LYS316 ALA317 TYR318 ALA319 ASP320 LYS321 ARG322 ALA323 ALA324 ILE325 ASP326 LYS327 ALA328 HIS329 PRO330 ALA331 ALA332 ARG333 GLY334 ASP335 PHE336 ASP337 LEU338 TYR339 MET340 LYS341 SER342 MET343 LEU344 HIS345 VAL346 LEU347 LYS348 VAL349 ALA350 GLY351 PRO352 LYS353 GLY354 VAL355 CYS356 VAL357 GLY358 ALA359 ASP360 TRP361 ASP362 GLY363 GLY364 GLY365 GLY366 MET367 ASP368 GLY369 PHE370 GLU371 ASP372 ILE373 THR374 ASP375 LEU376 PRO377 LYS378 ILE379 THR380 ALA381 ARG382 LEU383 LYS384 ALA385 GLU386 GLY387 TYR388 SER389 ASP390 ALA391 ASP392 ILE393 GLU394 ALA395 ILE396 TRP397 SER398 GLY399 ASN400 VAL401 LEU402 ARG403 ILE404 VAL405 ASP406 ALA407 ALA408 GLN409 ALA410 TYR411 ALA412 LYS413 SER414 VAL415
Unit 4 SER37 LYS38 ALA39 ASP40 LYS41 ALA42 LEU43 HIS44 ASP45 LYS46 PHE47 LEU48 THR49 LEU50 ASP51 THR52 HIS53 LEU54 ASP55 THR56 PRO57 ALA58 HIS59 PHE60 GLY61 ARG62 PRO63 GLY64 TRP65 ASP66 ILE67 ALA68 ASP69 HIS70 HIS71 GLU72 VAL73 GLU74 HIS75 ASP76 PHE77 SER78 GLN79 VAL80 ASP81 LEU82 PRO83 ARG84 MET85 ASN86 GLN87 GLY88 GLY89 LEU90 ASP91 GLY92 GLY93 PHE94 PHE95 VAL96 VAL97 TYR98 ILE99 GLY100 GLN101 GLY102 GLU103 LEU104 THR105 GLU106 LYS107 GLY108 TYR109 THR110 TYR111 ALA112 ARG113 ASP114 TYR115 ALA116 LEU117 HIS118 ARG119 THR120 ILE121 GLU122 ILE123 ARG124 GLU125 MET126 LEU127 ALA128 ALA129 ASN130 PRO131 ASP132 THR133 PHE134 GLU135 MET136 ALA137 LEU138 THR139 SER140 ASP141 ASP142 ALA143 ARG144 ARG145 ILE146 ALA147 LYS148 ALA149 GLY150 LYS151 LYS152 PHE153 ALA154 PHE155 VAL156 SER157 MET158 GLU159 ASN160 SER161 TRP162 PRO163 VAL164 GLY165 GLU166 ASP167 LEU168 SER169 LEU170 VAL171 GLU172 THR173 PHE174 TYR175 LYS176 GLU177 GLY178 LEU179 ARG180 MET181 ALA182 GLY183 PRO184 VAL185 HIS186 PHE187 ARG188 ASN189 ASN190 GLN191 LEU192 ALA193 ASP194 SER195 SER196 THR197 ASP198 PRO199 LYS200 GLY201 LYS202 ILE203 TRP204 ASN205 GLY206 TYR207 SER208 PRO209 LEU210 GLY211 LEU212 ARG213 TRP214 LEU215 ALA216 GLU217 ALA218 ASN219 ARG220 LEU221 GLY222 ILE223 VAL224 ILE225 ASP226 VAL227 SER228 HIS229 ALA230 SER231 ASP232 ASP233 VAL234 VAL235 ASP236 GLN237 SER238 VAL239 ALA240 LEU241 SER242 LYS243 ALA244 PRO245 ILE246 ILE247 ALA248 SER249 HIS250 SER251 GLY252 PRO253 LYS254 ALA255 VAL256 TYR257 ASP258 HIS259 PRO260 ARG261 ASN262 LEU263 ASP264 ASP265 ALA266 ARG267 LEU268 LYS269 LYS270 ILE271 ALA272 ASP273 ALA274 GLY275 GLY276 ALA277 ILE278 CYS279 ILE280 ASN281 SER282 ILE283 TYR284 LEU285 THR286 ASP287 THR288 THR289 PRO290 SER291 PRO292 GLU293 ALA304 PRO305 ASP306 MET307 LYS308 THR309 ALA310 THR311 PRO312 GLU313 ALA314 VAL315 LYS316 ALA317 TYR318 ALA319 ASP320 LYS321 ARG322 ALA323 ALA324 ILE325 ASP326 LYS327 ALA328 HIS329 PRO330 ALA331 ALA332 ARG333 GLY334 ASP335 PHE336 ASP337 LEU338 TYR339 MET340 LYS341 SER342 MET343 LEU344 HIS345 VAL346 LEU347 LYS348 VAL349 ALA350 GLY351 PRO352 LYS353 GLY354 VAL355 CYS356 VAL357 GLY358 ALA359 ASP360 TRP361 ASP362 GLY363 GLY364 GLY365 GLY366 MET367 ASP368 GLY369 PHE370 GLU371 ASP372 ILE373 THR374 ASP375 LEU376 PRO377 LYS378 ILE379 THR380 ALA381 ARG382 LEU383 LYS384 ALA385 GLU386 GLY387 TYR388 SER389 ASP390 ALA391 ASP392 ILE393 GLU394 ALA395 ILE396 TRP397 SER398 GLY399 ASN400 VAL401 LEU402 ARG403 ILE404 VAL405 ASP406 ALA407 ALA408 GLN409 ALA410 TYR411 ALA412 LYS413 SER414 VAL415
Ligands
Unit 5 ZN418 ZN419 CL420
Unit 6 ZN418 ZN419 CL420
Unit 7 ZN418 ZN419 CL420
Unit 8 ZN418 ZN419 CL420
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany