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Sequence, Chains, Asymmetric and Biological Units

Title FIT OF E PROTEIN AND FAB 1A1D-2 INTO 24 ANGSTROM RESOLUTION OF FAB COMPLEXED WITH DENGUE 2 VIRUS.
Keywords FAB, DENGUE, VIRUS, NEUTRALIZATION, VIRUS-IMMUNE SYSTEM COMP ICOSAHEDRAL VIRUS
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2R6P     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MAJOR ENVELOPE PROTEIN E  A 386 386 0
2  Protein   MAJOR ENVELOPE PROTEIN E  B 390 390 0
3  Protein   MAJOR ENVELOPE PROTEIN E  C 386 386 0
4  Protein   HEAVY CHAIN OF 1A1D-2  D 216 216 0
5  Protein   LIGHT CHAIN OF 1A1D-2  E 206 206 0
6  Protein   HEAVY CHAIN OF 1A1D-2  F 216 216 0
7  Protein   LIGHT CHAIN OF 1A1D-2  G 206 206 0
total       2006 2006 0

Proteins
Unit 1 MET1 ARG2 CYS3 ILE4 GLY5 ILE6 SER7 ASN8 ARG9 ASP10 PHE11 VAL12 GLU13 GLY14 VAL15 SER16 SER19 TRP20 VAL21 ASP22 ILE23 VAL24 LEU25 GLU26 HIS27 GLY28 SER29 CYS30 VAL31 THR32 THR33 MET34 ALA35 LYS36 ASN37 LYS38 PRO39 THR40 LEU41 ASP42 PHE43 GLU44 LEU45 ILE46 LYS47 THR48 GLU49 ALA50 LYS51 GLN52 PRO53 ALA54 THR55 LEU56 ARG57 LYS58 TYR59 CYS60 ILE61 GLU62 ALA63 LYS64 LEU65 THR66 ASN67 THR68 THR69 THR70 ASP71 SER72 ARG73 CYS74 PRO75 THR76 GLN77 GLY78 GLU79 PRO80 THR81 LEU82 ASN83 GLU84 GLU85 GLN86 ASP87 LYS88 ARG89 PHE90 VAL91 CYS92 LYS93 HIS94 SER95 MET96 VAL97 ASP98 ARG99 GLY100 TRP101 GLY102 ASN103 GLY104 CYS105 GLY106 LEU107 PHE108 GLY109 LYS110 GLY111 GLY112 ILE113 VAL114 THR115 CYS116 ALA117 MET118 PHE119 THR120 CYS121 LYS122 LYS123 ASN124 MET125 GLU126 GLY127 LYS128 ILE129 VAL130 GLN131 PRO132 GLU133 ASN134 LEU135 GLU136 TYR137 THR138 VAL139 VAL140 ILE141 THR142 PRO143 HIS144 SER145 GLY146 GLU147 GLU148 HIS149 ALA150 VAL151 GLY152 ASN153 ASP154 THR155 GLY156 LYS157 HIS158 GLY159 LYS160 GLU161 VAL162 LYS163 ILE164 THR165 PRO166 GLN167 SER168 SER169 ILE170 THR171 GLU172 ALA173 GLU174 LEU175 THR176 GLY177 TYR178 GLY179 THR180 VAL181 THR182 MET183 GLU184 CYS185 SER186 PRO187 ARG188 THR189 GLY190 LEU191 ASP192 PHE193 ASN194 GLU195 MET196 VAL197 LEU198 LEU199 GLN200 MET201 LYS202 ASP203 LYS204 ALA205 TRP206 LEU207 VAL208 HIS209 ARG210 GLN211 TRP212 PHE213 LEU214 ASP215 LEU216 PRO217 LEU218 PRO219 TRP220 LEU221 PRO222 GLY223 ALA224 GLY228 SER229 ASN230 TRP231 ILE232 GLN233 LYS234 GLU235 THR236 LEU237 VAL238 THR239 PHE240 LYS241 ASN242 PRO243 HIS244 ALA245 LYS246 LYS247 GLN248 ASP249 VAL250 VAL251 VAL252 LEU253 GLY254 SER255 GLN256 GLU257 GLY258 ALA259 MET260 HIS261 THR262 ALA263 LEU264 THR265 GLY266 ALA267 THR268 GLU269 ILE270 GLN271 MET272 SER273 SER274 GLY275 ASN276 LEU277 LEU278 PHE279 THR280 GLY281 HIS282 LEU283 LYS284 CYS285 ARG286 LEU287 ARG288 MET289 ASP290 LYS291 LEU292 GLN293 LEU294 SER298 TYR299 SER300 MET301 CYS302 THR303 GLY304 LYS305 PHE306 LYS307 VAL308 VAL309 LYS310 GLU311 ILE312 ALA313 GLU314 THR315 GLN316 HIS317 GLY318 THR319 ILE320 VAL321 ILE322 ARG323 VAL324 GLN325 TYR326 GLU327 GLY328 ASP329 GLY330 SER331 PRO332 CYS333 LYS334 ILE335 PRO336 PHE337 GLU338 ILE339 MET340 ASP341 LEU342 GLU343 LYS344 ARG345 HIS346 VAL347 LEU348 GLY349 ARG350 LEU351 ILE352 THR353 VAL354 ASN355 PRO356 ILE357 VAL358 THR359 GLU360 LYS361 ASP362 SER363 PRO364 VAL365 ASN366 ILE367 GLU368 ALA369 GLU370 PRO371 PRO372 PHE373 GLY374 ASP375 SER376 TYR377 ILE378 ILE379 ILE380 GLY381 VAL382 GLU383 PRO384 GLY385 GLN386 LEU387 LYS388 LEU389 ASN390 TRP391 PHE392 LYS393 LYS394
Unit 2 MET1 ARG2 CYS3 ILE4 GLY5 ILE6 SER7 ASN8 ARG9 ASP10 PHE11 VAL12 GLU13 GLY14 VAL15 SER16 SER19 TRP20 VAL21 ASP22 ILE23 VAL24 LEU25 GLU26 HIS27 GLY28 SER29 CYS30 VAL31 THR32 THR33 MET34 ALA35 LYS36 ASN37 LYS38 PRO39 THR40 LEU41 ASP42 PHE43 GLU44 LEU45 ILE46 LYS47 THR48 GLU49 ALA50 LYS51 GLN52 PRO53 ALA54 THR55 LEU56 ARG57 LYS58 TYR59 CYS60 ILE61 GLU62 ALA63 LYS64 LEU65 THR66 ASN67 THR68 THR69 THR70 ASP71 SER72 ARG73 CYS74 PRO75 THR76 GLN77 GLY78 GLU79 PRO80 THR81 LEU82 ASN83 GLU84 GLU85 GLN86 ASP87 LYS88 ARG89 PHE90 VAL91 CYS92 LYS93 HIS94 SER95 MET96 VAL97 ASP98 ARG99 GLY100 TRP101 GLY102 ASN103 GLY104 CYS105 GLY106 LEU107 PHE108 GLY109 LYS110 GLY111 GLY112 ILE113 VAL114 THR115 CYS116 ALA117 MET118 PHE119 THR120 CYS121 LYS122 LYS123 ASN124 MET125 GLU126 GLY127 LYS128 ILE129 VAL130 GLN131 PRO132 GLU133 ASN134 LEU135 GLU136 TYR137 THR138 VAL139 VAL140 ILE141 THR142 PRO143 HIS144 SER145 GLY146 GLU147 GLU148 HIS149 ALA150 VAL151 GLY152 ASN153 ASP154 THR155 GLY156 LYS157 HIS158 GLY159 LYS160 GLU161 VAL162 LYS163 ILE164 THR165 PRO166 GLN167 SER168 SER169 ILE170 THR171 GLU172 ALA173 GLU174 LEU175 THR176 GLY177 TYR178 GLY179 THR180 VAL181 THR182 MET183 GLU184 CYS185 SER186 PRO187 ARG188 THR189 GLY190 LEU191 ASP192 PHE193 ASN194 GLU195 MET196 VAL197 LEU198 LEU199 GLN200 MET201 LYS202 ASP203 LYS204 ALA205 TRP206 LEU207 VAL208 HIS209 ARG210 GLN211 TRP212 PHE213 LEU214 ASP215 LEU216 PRO217 LEU218 PRO219 TRP220 LEU221 PRO222 GLY223 ALA224 GLY228 SER229 ASN230 TRP231 ILE232 GLN233 LYS234 GLU235 THR236 LEU237 VAL238 THR239 PHE240 LYS241 ASN242 PRO243 HIS244 ALA245 LYS246 LYS247 GLN248 ASP249 VAL250 VAL251 VAL252 LEU253 GLY254 SER255 GLN256 GLU257 GLY258 ALA259 MET260 HIS261 THR262 ALA263 LEU264 THR265 GLY266 ALA267 THR268 GLU269 ILE270 GLN271 MET272 SER273 SER274 GLY275 ASN276 LEU277 LEU278 PHE279 THR280 GLY281 HIS282 LEU283 LYS284 CYS285 ARG286 LEU287 ARG288 MET289 ASP290 LYS291 LEU292 GLN293 LEU294 LYS295 GLY296 MET297 SER298 TYR299 SER300 MET301 CYS302 THR303 GLY304 LYS305 PHE306 LYS307 VAL308 VAL309 LYS310 GLU311 ILE312 ALA313 GLU314 THR315 GLN316 HIS317 GLY318 THR319 ILE320 VAL321 ILE322 ARG323 VAL324 GLN325 TYR326 GLU327 GLY328 ASP329 GLY330 SER331 PRO332 CYS333 LYS334 ILE335 PRO336 PHE337 GLU338 ILE339 MET340 ASP341 LEU342 GLU343 LYS344 ARG345 HIS346 VAL347 LEU348 GLY349 ARG350 LEU351 ILE352 THR353 VAL354 ASN355 PRO356 ILE357 VAL358 THR359 GLU360 LYS361 ASP362 SER363 PRO364 VAL365 ASN366 ILE367 GLU368 ALA369 GLU370 PRO371 PRO372 PHE373 GLY374 ASP375 SER376 TYR377 ILE378 ILE379 ILE380 GLY381 VAL382 GLU383 PRO384 GLY385 GLN386 LEU387 LYS388 LEU389 ASN390 TRP391 PHE392 LYS393 LYS394 GLY395
Unit 3 MET1 ARG2 CYS3 ILE4 GLY5 ILE6 SER7 ASN8 ARG9 ASP10 PHE11 VAL12 GLU13 GLY14 VAL15 SER16 SER19 TRP20 VAL21 ASP22 ILE23 VAL24 LEU25 GLU26 HIS27 GLY28 SER29 CYS30 VAL31 THR32 THR33 MET34 ALA35 LYS36 ASN37 LYS38 PRO39 THR40 LEU41 ASP42 PHE43 GLU44 LEU45 ILE46 LYS47 THR48 GLU49 ALA50 LYS51 GLN52 PRO53 ALA54 THR55 LEU56 ARG57 LYS58 TYR59 CYS60 ILE61 GLU62 ALA63 LYS64 LEU65 THR66 ASN67 THR68 THR69 THR70 ASP71 SER72 ARG73 CYS74 PRO75 THR76 GLN77 GLY78 GLU79 PRO80 THR81 LEU82 ASN83 GLU84 GLU85 GLN86 ASP87 LYS88 ARG89 PHE90 VAL91 CYS92 LYS93 HIS94 SER95 MET96 VAL97 ASP98 ARG99 GLY100 TRP101 GLY102 ASN103 GLY104 CYS105 GLY106 LEU107 PHE108 GLY109 LYS110 GLY111 GLY112 ILE113 VAL114 THR115 CYS116 ALA117 MET118 PHE119 THR120 CYS121 LYS122 LYS123 ASN124 MET125 GLU126 GLY127 LYS128 ILE129 VAL130 GLN131 PRO132 GLU133 ASN134 LEU135 GLU136 TYR137 THR138 VAL139 VAL140 ILE141 THR142 PRO143 HIS144 SER145 GLY146 GLU147 GLU148 HIS149 ALA150 VAL151 GLY152 ASN153 ASP154 THR155 GLY156 LYS157 HIS158 GLY159 LYS160 GLU161 VAL162 LYS163 ILE164 THR165 PRO166 GLN167 SER168 SER169 ILE170 THR171 GLU172 ALA173 GLU174 LEU175 THR176 GLY177 TYR178 GLY179 THR180 VAL181 THR182 MET183 GLU184 CYS185 SER186 PRO187 ARG188 THR189 GLY190 LEU191 ASP192 PHE193 ASN194 GLU195 MET196 VAL197 LEU198 LEU199 GLN200 MET201 LYS202 ASP203 LYS204 ALA205 TRP206 LEU207 VAL208 HIS209 ARG210 GLN211 TRP212 PHE213 LEU214 ASP215 LEU216 PRO217 LEU218 PRO219 TRP220 LEU221 PRO222 GLY223 ALA224 GLY228 SER229 ASN230 TRP231 ILE232 GLN233 LYS234 GLU235 THR236 LEU237 VAL238 THR239 PHE240 LYS241 ASN242 PRO243 HIS244 ALA245 LYS246 LYS247 GLN248 ASP249 VAL250 VAL251 VAL252 LEU253 GLY254 SER255 GLN256 GLU257 GLY258 ALA259 MET260 HIS261 THR262 ALA263 LEU264 THR265 GLY266 ALA267 THR268 GLU269 ILE270 GLN271 MET272 SER273 SER274 GLY275 ASN276 LEU277 LEU278 PHE279 THR280 GLY281 HIS282 LEU283 LYS284 CYS285 ARG286 LEU287 ARG288 MET289 ASP290 LYS291 LEU292 GLN293 LEU294 SER298 TYR299 SER300 MET301 CYS302 THR303 GLY304 LYS305 PHE306 LYS307 VAL308 VAL309 LYS310 GLU311 ILE312 ALA313 GLU314 THR315 GLN316 HIS317 GLY318 THR319 ILE320 VAL321 ILE322 ARG323 VAL324 GLN325 TYR326 GLU327 GLY328 ASP329 GLY330 SER331 PRO332 CYS333 LYS334 ILE335 PRO336 PHE337 GLU338 ILE339 MET340 ASP341 LEU342 GLU343 LYS344 ARG345 HIS346 VAL347 LEU348 GLY349 ARG350 LEU351 ILE352 THR353 VAL354 ASN355 PRO356 ILE357 VAL358 THR359 GLU360 LYS361 ASP362 SER363 PRO364 VAL365 ASN366 ILE367 GLU368 ALA369 GLU370 PRO371 PRO372 PHE373 GLY374 ASP375 SER376 TYR377 ILE378 ILE379 ILE380 GLY381 VAL382 GLU383 PRO384 GLY385 GLN386 LEU387 LYS388 LEU389 ASN390 TRP391 PHE392 LYS393 LYS394
Unit 4 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 THR23 ALA24 SER25 GLY26 PHE27 ASN28 ILE29 LYS30 ASP31 THR32 TYR33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLU42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 PRO53 ALA54 ASN55 GLY56 TYR57 SER58 LYS59 TYR60 ASP61 PRO62 LYS63 PHE64 GLN65 GLY66 LYS67 ALA68 THR69 ILE70 THR71 ALA72 ASP73 THR74 SER75 SER76 ASN77 ALA78 ALA79 TYR80 LEU81 GLN82 LEU83 SER84 SER85 LEU86 THR87 SER88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 PHE95 CYS96 ALA97 ARG98 ASP99 TYR100 GLU101 GLY102 PHE103 ALA104 TYR105 TRP106 GLY107 GLN108 GLY109 THR110 LEU111 VAL112 THR113 VAL114 SER115 SER116 ALA117 LYS118 THR119 THR120 PRO121 PRO122 SER123 VAL124 TYR125 PRO126 LEU127 ALA128 PRO129 GLY130 ALA131 ALA132 ALA133 ALA134 THR135 SER136 SER137 SER138 VAL139 THR140 LEU141 GLY142 CYS143 LEU144 VAL145 LYS146 GLY147 TYR148 PHE149 PRO150 GLU151 PRO152 VAL153 THR154 LEU155 THR156 TRP157 ASN158 SER159 GLY160 SER161 LEU162 SER163 SER164 GLY165 VAL166 HIS167 THR168 PHE169 PRO170 ALA171 VAL172 LEU173 GLN174 SER175 ASP176 LEU177 TYR178 THR179 LEU180 SER181 SER182 SER183 VAL184 THR185 VAL186 THR187 SER188 SER189 THR190 TRP191 PRO192 SER193 GLN194 THR195 ILE196 THR197 CYS198 ASN199 VAL200 ALA201 HIS202 PRO203 ALA204 SER205 SER206 THR207 LYS208 VAL209 ASP210 LYS211 LYS212 ILE213 GLU214 PRO215 ARG216
Unit 5 ASP1 ILE2 VAL3 LEU4 THR5 GLN6 SER7 PRO8 ALA9 SER10 LEU11 ALA12 VAL13 SER14 LEU15 GLY16 GLN17 ARG18 ALA19 THR20 ILE21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 VAL30 ARG31 TYR32 GLY33 ASN34 SER35 PHE36 MET37 HIS38 TRP39 TYR40 GLN41 GLN42 LYS43 PRO44 GLY45 GLN46 PRO47 PRO48 LYS49 LEU50 LEU51 ILE52 TYR53 ARG54 ALA55 SER56 SER57 LEU58 GLU59 SER60 GLY61 ILE62 PRO63 THR64 ARG65 PHE66 SER67 GLY68 SER69 GLY70 SER71 ARG72 THR73 ASP74 PHE75 THR76 LEU77 THR78 ILE79 ASN80 PRO81 VAL82 GLU83 ALA84 ASP85 ASP86 VAL87 ALA88 THR89 TYR90 TYR91 CYS92 GLN93 GLN94 THR95 ASN96 VAL97 ASP98 PRO99 TRP100 ALA101 PHE102 GLY103 GLY104 GLY105 THR106 LYS107 LEU108 GLU109 ILE110 LYS111 ARG112 ALA113 ASP114 ALA115 ALA116 PRO117 THR118 VAL119 SER120 ILE121 PHE122 PRO123 PRO124 SER125 SER126 GLU127 GLN128 LEU129 THR130 SER131 GLY132 GLY133 ALA134 SER135 VAL136 VAL137 CYS138 PHE139 LEU140 ASN141 ASN142 PHE143 TYR144 PRO145 LYS146 ASP147 ILE148 ASN149 VAL150 LYS151 TRP152 LYS153 ILE154 ASP155 ARG156 GLN157 ASN158 GLY159 VAL160 LEU161 ASN162 SER163 TRP164 THR165 ASP166 GLN167 ASP168 SER169 THR170 TYR171 SER172 MET173 SER174 SER175 THR176 LEU177 THR178 LEU179 THR180 LYS181 ASP182 GLU183 TYR184 GLU185 ARG186 HIS187 ASN188 SER189 TYR190 THR191 CYS192 GLU193 ALA194 THR195 SER196 PRO197 ILE198 VAL199 LYS200 SER201 PHE202 ASN203 ARG204 ASN205 GLU206
Unit 6 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 THR23 ALA24 SER25 GLY26 PHE27 ASN28 ILE29 LYS30 ASP31 THR32 TYR33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLU42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 PRO53 ALA54 ASN55 GLY56 TYR57 SER58 LYS59 TYR60 ASP61 PRO62 LYS63 PHE64 GLN65 GLY66 LYS67 ALA68 THR69 ILE70 THR71 ALA72 ASP73 THR74 SER75 SER76 ASN77 ALA78 ALA79 TYR80 LEU81 GLN82 LEU83 SER84 SER85 LEU86 THR87 SER88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 PHE95 CYS96 ALA97 ARG98 ASP99 TYR100 GLU101 GLY102 PHE103 ALA104 TYR105 TRP106 GLY107 GLN108 GLY109 THR110 LEU111 VAL112 THR113 VAL114 SER115 SER116 ALA117 LYS118 THR119 THR120 PRO121 PRO122 SER123 VAL124 TYR125 PRO126 LEU127 ALA128 PRO129 GLY130 ALA131 ALA132 ALA133 ALA134 THR135 SER136 SER137 SER138 VAL139 THR140 LEU141 GLY142 CYS143 LEU144 VAL145 LYS146 GLY147 TYR148 PHE149 PRO150 GLU151 PRO152 VAL153 THR154 LEU155 THR156 TRP157 ASN158 SER159 GLY160 SER161 LEU162 SER163 SER164 GLY165 VAL166 HIS167 THR168 PHE169 PRO170 ALA171 VAL172 LEU173 GLN174 SER175 ASP176 LEU177 TYR178 THR179 LEU180 SER181 SER182 SER183 VAL184 THR185 VAL186 THR187 SER188 SER189 THR190 TRP191 PRO192 SER193 GLN194 THR195 ILE196 THR197 CYS198 ASN199 VAL200 ALA201 HIS202 PRO203 ALA204 SER205 SER206 THR207 LYS208 VAL209 ASP210 LYS211 LYS212 ILE213 GLU214 PRO215 ARG216
Unit 7 ASP1 ILE2 VAL3 LEU4 THR5 GLN6 SER7 PRO8 ALA9 SER10 LEU11 ALA12 VAL13 SER14 LEU15 GLY16 GLN17 ARG18 ALA19 THR20 ILE21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 VAL30 ARG31 TYR32 GLY33 ASN34 SER35 PHE36 MET37 HIS38 TRP39 TYR40 GLN41 GLN42 LYS43 PRO44 GLY45 GLN46 PRO47 PRO48 LYS49 LEU50 LEU51 ILE52 TYR53 ARG54 ALA55 SER56 SER57 LEU58 GLU59 SER60 GLY61 ILE62 PRO63 THR64 ARG65 PHE66 SER67 GLY68 SER69 GLY70 SER71 ARG72 THR73 ASP74 PHE75 THR76 LEU77 THR78 ILE79 ASN80 PRO81 VAL82 GLU83 ALA84 ASP85 ASP86 VAL87 ALA88 THR89 TYR90 TYR91 CYS92 GLN93 GLN94 THR95 ASN96 VAL97 ASP98 PRO99 TRP100 ALA101 PHE102 GLY103 GLY104 GLY105 THR106 LYS107 LEU108 GLU109 ILE110 LYS111 ARG112 ALA113 ASP114 ALA115 ALA116 PRO117 THR118 VAL119 SER120 ILE121 PHE122 PRO123 PRO124 SER125 SER126 GLU127 GLN128 LEU129 THR130 SER131 GLY132 GLY133 ALA134 SER135 VAL136 VAL137 CYS138 PHE139 LEU140 ASN141 ASN142 PHE143 TYR144 PRO145 LYS146 ASP147 ILE148 ASN149 VAL150 LYS151 TRP152 LYS153 ILE154 ASP155 ARG156 GLN157 ASN158 GLY159 VAL160 LEU161 ASN162 SER163 TRP164 THR165 ASP166 GLN167 ASP168 SER169 THR170 TYR171 SER172 MET173 SER174 SER175 THR176 LEU177 THR178 LEU179 THR180 LYS181 ASP182 GLU183 TYR184 GLU185 ARG186 HIS187 ASN188 SER189 TYR190 THR191 CYS192 GLU193 ALA194 THR195 SER196 PRO197 ILE198 VAL199 LYS200 SER201 PHE202 ASN203 ARG204 ASN205 GLU206

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany