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Title | THE BIOCHEMICAL AND STRUCTURAL BASIS FOR FEEDBACK INHIBITION OF MEVALONATE KINASE AND ISOPRENOID METABOLISM | |
Keywords | MEVALONATE KINASE, FARNESYL THIODIPHOPHATE, ATP-BINDING, CATARACT, CHOLESTEROL BIOSYNTHESIS, CYTOPLASM, DISEASE MUTATION, LIPID SYNTHESIS, NUCLEOTIDE-BINDING, PEROXISOME, POLYMORPHISM, STEROID BIOSYNTHESIS, STEROL BIOSYNTHESIS, TRANSFERASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2R3V | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | MEVALONATE KINASE | A | 390 | 2933 | 0 |
2 | Protein | MEVALONATE KINASE | B | 388 | 2918 | 0 |
3 | Protein | MEVALONATE KINASE | C | 390 | 2933 | 0 |
4 | Protein | MEVALONATE KINASE | D | 389 | 2926 | 0 |
5 | Water | 225 | 0 | 225 | ||
total | 1782 | 11710 | 225 |
Unit 1 | LEU2 SER3 GLU4 VAL5 LEU6 LEU7 VAL8 SER9 ALA10 PRO11 GLY12 LYS13 VAL14 ILE15 LEU16 HIS17 GLY18 GLU19 HIS20 ALA21 VAL22 VAL23 HIS24 GLY25 LYS26 VAL27 ALA28 LEU29 ALA30 VAL31 SER32 LEU33 ASN34 LEU35 ARG36 THR37 PHE38 LEU39 ARG40 LEU41 GLN42 PRO43 HIS44 SER45 ASN46 GLY47 LYS48 VAL49 ASP50 LEU51 SER52 LEU53 PRO54 ASN55 ILE56 GLY57 ILE58 LYS59 ARG60 ALA61 TRP62 ASP63 VAL64 ALA65 ARG66 LEU67 GLN68 SER69 LEU70 ASP71 THR72 SER73 PHE74 LEU75 VAL80 THR81 THR82 PRO83 THR84 SER85 GLU86 GLN87 VAL88 GLU89 LYS90 LEU91 LYS92 GLU93 VAL94 ALA95 GLY96 LEU97 PRO98 ASP99 ASP100 CYS101 ALA102 VAL103 THR104 GLU105 ARG106 LEU107 ALA108 VAL109 LEU110 ALA111 PHE112 LEU113 TYR114 LEU115 TYR116 LEU117 SER118 ILE119 CYS120 ARG121 LYS122 GLN123 ARG124 ALA125 LEU126 PRO127 SER128 LEU129 ASP130 ILE131 VAL132 VAL133 TRP134 SER135 GLU136 LEU137 PRO138 PRO139 GLY140 ALA141 GLY142 LEU143 GLY144 SER145 SER146 ALA147 ALA148 TYR149 SER150 VAL151 CYS152 LEU153 ALA154 ALA155 ALA156 LEU157 LEU158 THR159 VAL160 CYS161 GLU162 GLU163 ILE164 PRO165 ASN166 PRO167 LEU168 LYS169 ASP170 GLY171 ASP172 CYS173 VAL174 ASN175 ARG176 TRP177 THR178 LYS179 GLU180 ASP181 LEU182 GLU183 LEU184 ILE185 ASN186 LYS187 TRP188 ALA189 PHE190 GLN191 GLY192 GLU193 ARG194 MET195 ILE196 HIS197 GLY198 ASN199 PRO200 SER201 GLY202 VAL203 ASP204 ASN205 ALA206 VAL207 SER208 THR209 TRP210 GLY211 GLY212 ALA213 LEU214 ARG215 TYR216 HIS217 GLN218 GLY219 LYS220 ILE221 SER222 SER223 LEU224 LYS225 ARG226 SER227 PRO228 ALA229 LEU230 GLN231 ILE232 LEU233 LEU234 THR235 ASN236 THR237 LYS238 VAL239 PRO240 ARG241 ASN242 THR243 ARG244 ALA245 LEU246 VAL247 ALA248 GLY249 VAL250 ARG251 ASN252 ARG253 LEU254 LEU255 LYS256 PHE257 PRO258 GLU259 ILE260 VAL261 ALA262 PRO263 LEU264 LEU265 THR266 SER267 ILE268 ASP269 ALA270 ILE271 SER272 LEU273 GLU274 CYS275 GLU276 ARG277 VAL278 LEU279 GLY280 GLU281 MET282 GLY283 GLU284 ALA285 PRO286 ALA287 PRO288 GLU289 GLN290 TYR291 LEU292 VAL293 LEU294 GLU295 GLU296 LEU297 ILE298 ASP299 MET300 ASN301 GLN302 HIS303 HIS304 LEU305 ASN306 ALA307 LEU308 GLY309 VAL310 GLY311 HIS312 ALA313 SER314 LEU315 ASP316 GLN317 LEU318 CYS319 GLN320 VAL321 THR322 ARG323 ALA324 ARG325 GLY326 LEU327 HIS328 SER329 LYS330 LEU331 THR332 GLY333 ALA334 GLY335 GLY336 GLY337 GLY338 CYS339 GLY340 ILE341 THR342 LEU343 LEU344 LYS345 PRO346 GLY347 LEU348 GLU349 GLN350 PRO351 GLU352 VAL353 GLU354 ALA355 THR356 LYS357 GLN358 ALA359 LEU360 THR361 SER362 CYS363 GLY364 PHE365 ASP366 CYS367 LEU368 GLU369 THR370 SER371 ILE372 GLY373 ALA374 PRO375 GLY376 VAL377 SER378 ILE379 HIS380 SER381 ALA382 THR383 SER384 LEU385 ASP386 SER387 ARG388 VAL389 GLN390 GLN391 ALA392 LEU393 ASP394 GLY395 |
Unit 2 | LEU2 SER3 GLU4 VAL5 LEU6 LEU7 VAL8 SER9 ALA10 PRO11 GLY12 LYS13 VAL14 ILE15 LEU16 HIS17 GLY18 GLU19 HIS20 ALA21 VAL22 VAL23 HIS24 GLY25 LYS26 VAL27 ALA28 LEU29 ALA30 VAL31 SER32 LEU33 ASN34 LEU35 ARG36 THR37 PHE38 LEU39 ARG40 LEU41 GLN42 PRO43 HIS44 SER45 ASN46 GLY47 LYS48 VAL49 ASP50 LEU51 SER52 LEU53 PRO54 ASN55 ILE56 GLY57 ILE58 LYS59 ARG60 ALA61 TRP62 ASP63 VAL64 ALA65 ARG66 LEU67 GLN68 SER69 LEU70 ASP71 THR72 SER73 PHE74 THR81 THR82 PRO83 THR84 SER85 GLU86 GLN87 VAL88 GLU89 LYS90 LEU91 LYS92 GLU93 VAL94 ALA95 GLY96 LEU97 PRO98 ASP99 ASP100 CYS101 ALA102 VAL103 THR104 GLU105 ARG106 LEU107 ALA108 VAL109 LEU110 ALA111 PHE112 LEU113 TYR114 LEU115 TYR116 LEU117 SER118 ILE119 CYS120 ARG121 LYS122 GLN123 ARG124 ALA125 LEU126 PRO127 SER128 LEU129 ASP130 ILE131 VAL132 VAL133 TRP134 SER135 GLU136 LEU137 PRO138 PRO139 GLY140 ALA141 GLY142 LEU143 GLY144 SER145 SER146 ALA147 ALA148 TYR149 SER150 VAL151 CYS152 LEU153 ALA154 ALA155 ALA156 LEU157 LEU158 THR159 VAL160 CYS161 GLU162 GLU163 ILE164 PRO165 ASN166 PRO167 LEU168 LYS169 ASP170 GLY171 ASP172 CYS173 VAL174 ASN175 ARG176 TRP177 THR178 LYS179 GLU180 ASP181 LEU182 GLU183 LEU184 ILE185 ASN186 LYS187 TRP188 ALA189 PHE190 GLN191 GLY192 GLU193 ARG194 MET195 ILE196 HIS197 GLY198 ASN199 PRO200 SER201 GLY202 VAL203 ASP204 ASN205 ALA206 VAL207 SER208 THR209 TRP210 GLY211 GLY212 ALA213 LEU214 ARG215 TYR216 HIS217 GLN218 GLY219 LYS220 ILE221 SER222 SER223 LEU224 LYS225 ARG226 SER227 PRO228 ALA229 LEU230 GLN231 ILE232 LEU233 LEU234 THR235 ASN236 THR237 LYS238 VAL239 PRO240 ARG241 ASN242 THR243 ARG244 ALA245 LEU246 VAL247 ALA248 GLY249 VAL250 ARG251 ASN252 ARG253 LEU254 LEU255 LYS256 PHE257 PRO258 GLU259 ILE260 VAL261 ALA262 PRO263 LEU264 LEU265 THR266 SER267 ILE268 ASP269 ALA270 ILE271 SER272 LEU273 GLU274 CYS275 GLU276 ARG277 VAL278 LEU279 GLY280 GLU281 MET282 GLY283 GLU284 ALA285 PRO286 ALA287 PRO288 GLU289 GLN290 TYR291 LEU292 VAL293 LEU294 GLU295 GLU296 LEU297 ILE298 ASP299 MET300 ASN301 GLN302 HIS303 HIS304 LEU305 ASN306 ALA307 LEU308 GLY309 VAL310 GLY311 HIS312 ALA313 SER314 LEU315 ASP316 GLN317 LEU318 CYS319 GLN320 VAL321 THR322 ARG323 ALA324 ARG325 GLY326 LEU327 HIS328 SER329 LYS330 LEU331 THR332 GLY333 ALA334 GLY335 GLY336 GLY337 GLY338 CYS339 GLY340 ILE341 THR342 LEU343 LEU344 LYS345 PRO346 GLY347 LEU348 GLU349 GLN350 PRO351 GLU352 VAL353 GLU354 ALA355 THR356 LYS357 GLN358 ALA359 LEU360 THR361 SER362 CYS363 GLY364 PHE365 ASP366 CYS367 LEU368 GLU369 THR370 SER371 ILE372 GLY373 ALA374 PRO375 GLY376 VAL377 SER378 ILE379 HIS380 SER381 ALA382 THR383 SER384 LEU385 ASP386 SER387 ARG388 VAL389 GLN390 GLN391 ALA392 LEU393 ASP394 GLY395 |
Unit 3 | LEU2 SER3 GLU4 VAL5 LEU6 LEU7 VAL8 SER9 ALA10 PRO11 GLY12 LYS13 VAL14 ILE15 LEU16 HIS17 GLY18 GLU19 HIS20 ALA21 VAL22 VAL23 HIS24 GLY25 LYS26 VAL27 ALA28 LEU29 ALA30 VAL31 SER32 LEU33 ASN34 LEU35 ARG36 THR37 PHE38 LEU39 ARG40 LEU41 GLN42 PRO43 HIS44 SER45 ASN46 GLY47 LYS48 VAL49 ASP50 LEU51 SER52 LEU53 PRO54 ASN55 ILE56 GLY57 ILE58 LYS59 ARG60 ALA61 TRP62 ASP63 VAL64 ALA65 ARG66 LEU67 GLN68 SER69 LEU70 ASP71 THR72 SER73 PHE74 LEU75 VAL80 THR81 THR82 PRO83 THR84 SER85 GLU86 GLN87 VAL88 GLU89 LYS90 LEU91 LYS92 GLU93 VAL94 ALA95 GLY96 LEU97 PRO98 ASP99 ASP100 CYS101 ALA102 VAL103 THR104 GLU105 ARG106 LEU107 ALA108 VAL109 LEU110 ALA111 PHE112 LEU113 TYR114 LEU115 TYR116 LEU117 SER118 ILE119 CYS120 ARG121 LYS122 GLN123 ARG124 ALA125 LEU126 PRO127 SER128 LEU129 ASP130 ILE131 VAL132 VAL133 TRP134 SER135 GLU136 LEU137 PRO138 PRO139 GLY140 ALA141 GLY142 LEU143 GLY144 SER145 SER146 ALA147 ALA148 TYR149 SER150 VAL151 CYS152 LEU153 ALA154 ALA155 ALA156 LEU157 LEU158 THR159 VAL160 CYS161 GLU162 GLU163 ILE164 PRO165 ASN166 PRO167 LEU168 LYS169 ASP170 GLY171 ASP172 CYS173 VAL174 ASN175 ARG176 TRP177 THR178 LYS179 GLU180 ASP181 LEU182 GLU183 LEU184 ILE185 ASN186 LYS187 TRP188 ALA189 PHE190 GLN191 GLY192 GLU193 ARG194 MET195 ILE196 HIS197 GLY198 ASN199 PRO200 SER201 GLY202 VAL203 ASP204 ASN205 ALA206 VAL207 SER208 THR209 TRP210 GLY211 GLY212 ALA213 LEU214 ARG215 TYR216 HIS217 GLN218 GLY219 LYS220 ILE221 SER222 SER223 LEU224 LYS225 ARG226 SER227 PRO228 ALA229 LEU230 GLN231 ILE232 LEU233 LEU234 THR235 ASN236 THR237 LYS238 VAL239 PRO240 ARG241 ASN242 THR243 ARG244 ALA245 LEU246 VAL247 ALA248 GLY249 VAL250 ARG251 ASN252 ARG253 LEU254 LEU255 LYS256 PHE257 PRO258 GLU259 ILE260 VAL261 ALA262 PRO263 LEU264 LEU265 THR266 SER267 ILE268 ASP269 ALA270 ILE271 SER272 LEU273 GLU274 CYS275 GLU276 ARG277 VAL278 LEU279 GLY280 GLU281 MET282 GLY283 GLU284 ALA285 PRO286 ALA287 PRO288 GLU289 GLN290 TYR291 LEU292 VAL293 LEU294 GLU295 GLU296 LEU297 ILE298 ASP299 MET300 ASN301 GLN302 HIS303 HIS304 LEU305 ASN306 ALA307 LEU308 GLY309 VAL310 GLY311 HIS312 ALA313 SER314 LEU315 ASP316 GLN317 LEU318 CYS319 GLN320 VAL321 THR322 ARG323 ALA324 ARG325 GLY326 LEU327 HIS328 SER329 LYS330 LEU331 THR332 GLY333 ALA334 GLY335 GLY336 GLY337 GLY338 CYS339 GLY340 ILE341 THR342 LEU343 LEU344 LYS345 PRO346 GLY347 LEU348 GLU349 GLN350 PRO351 GLU352 VAL353 GLU354 ALA355 THR356 LYS357 GLN358 ALA359 LEU360 THR361 SER362 CYS363 GLY364 PHE365 ASP366 CYS367 LEU368 GLU369 THR370 SER371 ILE372 GLY373 ALA374 PRO375 GLY376 VAL377 SER378 ILE379 HIS380 SER381 ALA382 THR383 SER384 LEU385 ASP386 SER387 ARG388 VAL389 GLN390 GLN391 ALA392 LEU393 ASP394 GLY395 |
Unit 4 | LEU2 SER3 GLU4 VAL5 LEU6 LEU7 VAL8 SER9 ALA10 PRO11 GLY12 LYS13 VAL14 ILE15 LEU16 HIS17 GLY18 GLU19 HIS20 ALA21 VAL22 VAL23 HIS24 GLY25 LYS26 VAL27 ALA28 LEU29 ALA30 VAL31 SER32 LEU33 ASN34 LEU35 ARG36 THR37 PHE38 LEU39 ARG40 LEU41 GLN42 PRO43 HIS44 SER45 ASN46 GLY47 LYS48 VAL49 ASP50 LEU51 SER52 LEU53 PRO54 ASN55 ILE56 GLY57 ILE58 LYS59 ARG60 ALA61 TRP62 ASP63 VAL64 ALA65 ARG66 LEU67 GLN68 SER69 LEU70 ASP71 THR72 SER73 PHE74 LEU75 THR81 THR82 PRO83 THR84 SER85 GLU86 GLN87 VAL88 GLU89 LYS90 LEU91 LYS92 GLU93 VAL94 ALA95 GLY96 LEU97 PRO98 ASP99 ASP100 CYS101 ALA102 VAL103 THR104 GLU105 ARG106 LEU107 ALA108 VAL109 LEU110 ALA111 PHE112 LEU113 TYR114 LEU115 TYR116 LEU117 SER118 ILE119 CYS120 ARG121 LYS122 GLN123 ARG124 ALA125 LEU126 PRO127 SER128 LEU129 ASP130 ILE131 VAL132 VAL133 TRP134 SER135 GLU136 LEU137 PRO138 PRO139 GLY140 ALA141 GLY142 LEU143 GLY144 SER145 SER146 ALA147 ALA148 TYR149 SER150 VAL151 CYS152 LEU153 ALA154 ALA155 ALA156 LEU157 LEU158 THR159 VAL160 CYS161 GLU162 GLU163 ILE164 PRO165 ASN166 PRO167 LEU168 LYS169 ASP170 GLY171 ASP172 CYS173 VAL174 ASN175 ARG176 TRP177 THR178 LYS179 GLU180 ASP181 LEU182 GLU183 LEU184 ILE185 ASN186 LYS187 TRP188 ALA189 PHE190 GLN191 GLY192 GLU193 ARG194 MET195 ILE196 HIS197 GLY198 ASN199 PRO200 SER201 GLY202 VAL203 ASP204 ASN205 ALA206 VAL207 SER208 THR209 TRP210 GLY211 GLY212 ALA213 LEU214 ARG215 TYR216 HIS217 GLN218 GLY219 LYS220 ILE221 SER222 SER223 LEU224 LYS225 ARG226 SER227 PRO228 ALA229 LEU230 GLN231 ILE232 LEU233 LEU234 THR235 ASN236 THR237 LYS238 VAL239 PRO240 ARG241 ASN242 THR243 ARG244 ALA245 LEU246 VAL247 ALA248 GLY249 VAL250 ARG251 ASN252 ARG253 LEU254 LEU255 LYS256 PHE257 PRO258 GLU259 ILE260 VAL261 ALA262 PRO263 LEU264 LEU265 THR266 SER267 ILE268 ASP269 ALA270 ILE271 SER272 LEU273 GLU274 CYS275 GLU276 ARG277 VAL278 LEU279 GLY280 GLU281 MET282 GLY283 GLU284 ALA285 PRO286 ALA287 PRO288 GLU289 GLN290 TYR291 LEU292 VAL293 LEU294 GLU295 GLU296 LEU297 ILE298 ASP299 MET300 ASN301 GLN302 HIS303 HIS304 LEU305 ASN306 ALA307 LEU308 GLY309 VAL310 GLY311 HIS312 ALA313 SER314 LEU315 ASP316 GLN317 LEU318 CYS319 GLN320 VAL321 THR322 ARG323 ALA324 ARG325 GLY326 LEU327 HIS328 SER329 LYS330 LEU331 THR332 GLY333 ALA334 GLY335 GLY336 GLY337 GLY338 CYS339 GLY340 ILE341 THR342 LEU343 LEU344 LYS345 PRO346 GLY347 LEU348 GLU349 GLN350 PRO351 GLU352 VAL353 GLU354 ALA355 THR356 LYS357 GLN358 ALA359 LEU360 THR361 SER362 CYS363 GLY364 PHE365 ASP366 CYS367 LEU368 GLU369 THR370 SER371 ILE372 GLY373 ALA374 PRO375 GLY376 VAL377 SER378 ILE379 HIS380 SER381 ALA382 THR383 SER384 LEU385 ASP386 SER387 ARG388 VAL389 GLN390 GLN391 ALA392 LEU393 ASP394 GLY395 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |