2R0T - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GDP-4-KETO-6-DEOXYMANNOSE-3-DEHYDRATASE TRAPPED PLP-GLUTAMATE GEMINAL DIAMINE
• Keywords: COLITOSE, ASPARTATE AMINOTRANSFERASE, GEMINAL DIAMINE, PYRID PHOSPHATE, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2R0T	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYRIDOXAMINE 5-PHOSPHATE-DEPENDENT DEHYDRASE	A	386	3092	0
2	Protein	PYRIDOXAMINE 5-PHOSPHATE-DEPENDENT DEHYDRASE	B	386	3092	0
3	Ligand	PYRIDOXAMINE 5-PHOSPHATE-DEPENDENT DEHYDRASE	A	1	0	25
4	Ligand	PYRIDOXAMINE 5-PHOSPHATE-DEPENDENT DEHYDRASE	B	1	0	25
5	Water			258	0	258
total				1032	6184	308

Proteins

Unit 1

ASN 3 TYR 4 PRO 5 LEU 6 ALA 7 SER 8 SER 9 THR 10 TRP 11 ASP 12 ASP 13 LEU 14 GLU 15 TYR 16 LYS 17 ALA 18 ILE 19 GLN 20 SER 21 VAL 22 LEU 23 ASP 24 SER 25 LYS 26 MET 27 PHE 28 THR 29 MET 30 GLY 31 GLU 32 TYR 33 VAL 34 LYS 35 GLN 36 TYR 37 GLU 38 THR 39 GLN 40 PHE 41 ALA 42 LYS 43 THR 44 PHE 45 GLY 46 SER 47 LYS 48 TYR 49 ALA 50 VAL 51 MET 52 VAL 53 SER 54 SER 55 GLY 56 SER 57 THR 58 ALA 59 ASN 60 LEU 61 LEU 62 MET 63 ILE 64 ALA 65 ALA 66 LEU 67 PHE 68 PHE 69 THR 70 LYS 71 LYS 72 PRO 73 ARG 74 LEU 75 LYS 76 LYS 77 GLY 78 ASP 79 GLU 80 ILE 81 ILE 82 VAL 83 PRO 84 ALA 85 VAL 86 SER 87 TRP 88 SER 89 THR 90 THR 91 TYR 92 TYR 93 PRO 94 LEU 95 GLN 96 GLN 97 TYR 98 GLY 99 LEU 100 ARG 101 VAL 102 LYS 103 PHE 104 VAL 105 ASP 106 ILE 107 ASP 108 ILE 109 ASN 110 THR 111 LEU 112 ASN 113 ILE 114 ASP 115 ILE 116 GLU 117 SER 118 LEU 119 LYS 120 GLU 121 ALA 122 VAL 123 THR 124 ASP 125 SER 126 THR 127 LYS 128 ALA 129 ILE 130 LEU 131 THR 132 VAL 133 ASN 134 LEU 135 LEU 136 GLY 137 ASN 138 PRO 139 ASN 140 ASN 141 PHE 142 ASP 143 GLU 144 ILE 145 ASN 146 LYS 147 ILE 148 ILE 149 GLY 150 GLY 151 ARG 152 ASP 153 ILE 154 ILE 155 LEU 156 LEU 157 GLU 158 ASP 159 ASN 160 CYS 161 GLU 162 SER 163 MET 164 GLY 165 ALA 166 THR 167 PHE 168 ASN 169 ASN 170 LYS 171 CYS 172 ALA 173 GLY 174 THR 175 PHE 176 GLY 177 LEU 178 MET 179 GLY 180 THR 181 PHE 182 SER 183 SER 184 PHE 185 TYR 186 SER 187 LYS 188 HIS 189 ILE 190 ALA 191 THR 192 MET 193 GLU 194 GLY 195 GLY 196 CYS 197 ILE 198 VAL 199 THR 200 ASP 201 ASP 202 GLU 203 GLU 204 ILE 205 TYR 206 HIS 207 ILE 208 LEU 209 LEU 210 CYS 211 ILE 212 ARG 213 ALA 214 HIS 215 GLY 216 TRP 217 THR 218 ARG 219 ASN 220 LEU 221 PRO 222 LYS 223 LYS 224 ASN 225 LYS 226 VAL 227 THR 228 GLY 229 VAL 230 LYS 231 SER 232 ASP 233 ASP 234 GLN 235 PHE 236 GLU 237 GLU 238 SER 239 PHE 240 LYS 241 PHE 242 VAL 243 LEU 244 PRO 245 GLY 246 TYR 247 ASN 248 VAL 249 ARG 250 PRO 251 LEU 252 GLU 253 MET 254 SER 255 GLY 256 ALA 257 ILE 258 GLY 259 ILE 260 GLU 261 GLN 262 LEU 263 LYS 264 LYS 265 LEU 266 PRO 267 ARG 268 PHE 269 ILE 270 SER 271 VAL 272 ARG 273 ARG 274 LYS 275 ASN 276 ALA 277 GLU 278 TYR 279 PHE 280 LEU 281 ASP 282 LYS 283 PHE 284 LYS 285 ASP 286 HIS 287 PRO 288 TYR 289 LEU 290 ASP 291 VAL 292 GLN 293 GLN 294 GLU 295 THR 296 GLY 297 GLU 298 SER 299 SER 300 TRP 301 PHE 302 GLY 303 PHE 304 SER 305 PHE 306 ILE 307 ILE 308 LYS 309 LYS 310 ASP 311 SER 312 GLY 313 VAL 314 ILE 315 ARG 316 LYS 317 GLN 318 LEU 319 VAL 320 GLU 321 ASN 322 LEU 323 ASN 324 SER 325 ALA 326 GLY 327 ILE 328 GLU 329 CYS 330 ARG 331 PRO 332 ILE 333 VAL 334 THR 335 GLY 336 ASN 337 PHE 338 LEU 339 LYS 340 ASN 341 THR 342 ASP 343 VAL 344 LEU 345 LYS 346 TYR 347 PHE 348 ASP 349 TYR 350 THR 351 VAL 352 HIS 353 ASN 354 ASN 355 VAL 356 ASP 357 ASN 358 ALA 359 GLU 360 TYR 361 LEU 362 ASP 363 LYS 364 ASN 365 GLY 366 LEU 367 PHE 368 VAL 369 GLY 370 ASN 371 HIS 372 GLN 373 ILE 374 GLU 375 LEU 376 PHE 377 ASP 378 GLU 379 ILE 380 ASP 381 TYR 382 LEU 383 ARG 384 GLU 385 VAL 386 LEU 387 LYS 388

Unit 2

ASN 3 TYR 4 PRO 5 LEU 6 ALA 7 SER 8 SER 9 THR 10 TRP 11 ASP 12 ASP 13 LEU 14 GLU 15 TYR 16 LYS 17 ALA 18 ILE 19 GLN 20 SER 21 VAL 22 LEU 23 ASP 24 SER 25 LYS 26 MET 27 PHE 28 THR 29 MET 30 GLY 31 GLU 32 TYR 33 VAL 34 LYS 35 GLN 36 TYR 37 GLU 38 THR 39 GLN 40 PHE 41 ALA 42 LYS 43 THR 44 PHE 45 GLY 46 SER 47 LYS 48 TYR 49 ALA 50 VAL 51 MET 52 VAL 53 SER 54 SER 55 GLY 56 SER 57 THR 58 ALA 59 ASN 60 LEU 61 LEU 62 MET 63 ILE 64 ALA 65 ALA 66 LEU 67 PHE 68 PHE 69 THR 70 LYS 71 LYS 72 PRO 73 ARG 74 LEU 75 LYS 76 LYS 77 GLY 78 ASP 79 GLU 80 ILE 81 ILE 82 VAL 83 PRO 84 ALA 85 VAL 86 SER 87 TRP 88 SER 89 THR 90 THR 91 TYR 92 TYR 93 PRO 94 LEU 95 GLN 96 GLN 97 TYR 98 GLY 99 LEU 100 ARG 101 VAL 102 LYS 103 PHE 104 VAL 105 ASP 106 ILE 107 ASP 108 ILE 109 ASN 110 THR 111 LEU 112 ASN 113 ILE 114 ASP 115 ILE 116 GLU 117 SER 118 LEU 119 LYS 120 GLU 121 ALA 122 VAL 123 THR 124 ASP 125 SER 126 THR 127 LYS 128 ALA 129 ILE 130 LEU 131 THR 132 VAL 133 ASN 134 LEU 135 LEU 136 GLY 137 ASN 138 PRO 139 ASN 140 ASN 141 PHE 142 ASP 143 GLU 144 ILE 145 ASN 146 LYS 147 ILE 148 ILE 149 GLY 150 GLY 151 ARG 152 ASP 153 ILE 154 ILE 155 LEU 156 LEU 157 GLU 158 ASP 159 ASN 160 CYS 161 GLU 162 SER 163 MET 164 GLY 165 ALA 166 THR 167 PHE 168 ASN 169 ASN 170 LYS 171 CYS 172 ALA 173 GLY 174 THR 175 PHE 176 GLY 177 LEU 178 MET 179 GLY 180 THR 181 PHE 182 SER 183 SER 184 PHE 185 TYR 186 SER 187 LYS 188 HIS 189 ILE 190 ALA 191 THR 192 MET 193 GLU 194 GLY 195 GLY 196 CYS 197 ILE 198 VAL 199 THR 200 ASP 201 ASP 202 GLU 203 GLU 204 ILE 205 TYR 206 HIS 207 ILE 208 LEU 209 LEU 210 CYS 211 ILE 212 ARG 213 ALA 214 HIS 215 GLY 216 TRP 217 THR 218 ARG 219 ASN 220 LEU 221 PRO 222 LYS 223 LYS 224 ASN 225 LYS 226 VAL 227 THR 228 GLY 229 VAL 230 LYS 231 SER 232 ASP 233 ASP 234 GLN 235 PHE 236 GLU 237 GLU 238 SER 239 PHE 240 LYS 241 PHE 242 VAL 243 LEU 244 PRO 245 GLY 246 TYR 247 ASN 248 VAL 249 ARG 250 PRO 251 LEU 252 GLU 253 MET 254 SER 255 GLY 256 ALA 257 ILE 258 GLY 259 ILE 260 GLU 261 GLN 262 LEU 263 LYS 264 LYS 265 LEU 266 PRO 267 ARG 268 PHE 269 ILE 270 SER 271 VAL 272 ARG 273 ARG 274 LYS 275 ASN 276 ALA 277 GLU 278 TYR 279 PHE 280 LEU 281 ASP 282 LYS 283 PHE 284 LYS 285 ASP 286 HIS 287 PRO 288 TYR 289 LEU 290 ASP 291 VAL 292 GLN 293 GLN 294 GLU 295 THR 296 GLY 297 GLU 298 SER 299 SER 300 TRP 301 PHE 302 GLY 303 PHE 304 SER 305 PHE 306 ILE 307 ILE 308 LYS 309 LYS 310 ASP 311 SER 312 GLY 313 VAL 314 ILE 315 ARG 316 LYS 317 GLN 318 LEU 319 VAL 320 GLU 321 ASN 322 LEU 323 ASN 324 SER 325 ALA 326 GLY 327 ILE 328 GLU 329 CYS 330 ARG 331 PRO 332 ILE 333 VAL 334 THR 335 GLY 336 ASN 337 PHE 338 LEU 339 LYS 340 ASN 341 THR 342 ASP 343 VAL 344 LEU 345 LYS 346 TYR 347 PHE 348 ASP 349 TYR 350 THR 351 VAL 352 HIS 353 ASN 354 ASN 355 VAL 356 ASP 357 ASN 358 ALA 359 GLU 360 TYR 361 LEU 362 ASP 363 LYS 364 ASN 365 GLY 366 LEU 367 PHE 368 VAL 369 GLY 370 ASN 371 HIS 372 GLN 373 ILE 374 GLU 375 LEU 376 PHE 377 ASP 378 GLU 379 ILE 380 ASP 381 TYR 382 LEU 383 ARG 384 GLU 385 VAL 386 LEU 387 LYS 388

Ligands

Unit 3	PGU 500
Unit 4	PGU 500