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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A XAA-PRO DIPEPTIDASE WITH BOUND METHIO THE ACTIVE SITE
Keywords AMIDOHYDROLASE, DIPEPTIDASE, TIM BARREL, PROTEIN STRUCTURE INITIATIVE, PSI-2, 9355E, NYSGXRC, STRUCTURAL GENOMICS, NEW RESEARCH CENTER FOR STRUCTURAL GENOMICS, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2QS8     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   XAA-PRO DIPEPTIDASE  A 406 2989 96
2  Protein   XAA-PRO DIPEPTIDASE  B 405 2984 96
3  Protein   XAA-PRO DIPEPTIDASE  A 2 0 10
4  Protein   XAA-PRO DIPEPTIDASE  B 2 0 10
5 Water     285 0 285
total       1100 5973 497

Proteins
Unit 1 SER7 LYS8 THR9 LEU10 ILE11 HIS12 ALA13 GLY14 LYS15 LEU16 ILE17 ASP18 GLY19 LYS20 SER21 ASP22 GLN23 VAL24 GLN25 SER26 ARG27 ILE28 SER29 ILE30 VAL31 ILE32 ASP33 GLY34 ASN35 ILE36 ILE37 SER38 ASP39 ILE40 LYS41 LYS42 GLY43 PHE44 ILE45 SER46 SER47 ASN48 ASP49 PHE50 GLU51 ASP52 TYR53 ILE54 ASP55 LEU56 ARG57 ASP58 HIS59 THR60 VAL61 LEU62 PRO63 GLY64 LEU65 MSE66 ASP67 MSE68 HIS69 VAL70 HIS71 PHE72 GLY73 GLN74 GLU75 TYR76 GLN77 SER78 LYS79 ALA80 GLN81 ALA82 PRO83 ILE84 LYS85 VAL86 GLU87 ARG88 GLU89 MSE90 GLN91 ALA92 ILE93 LEU94 ALA95 THR96 GLN97 HIS98 ALA99 TYR100 VAL101 THR102 PHE103 LYS104 SER105 GLY106 PHE107 THR108 THR109 VAL110 ARG111 GLN112 VAL113 GLY114 ASP115 SER116 GLY117 LEU118 VAL119 ALA120 ILE121 SER122 LEU123 ARG124 ASP125 ALA126 ILE127 ASN128 SER129 GLY130 LYS131 LEU132 ALA133 GLY134 PRO135 ARG136 ILE137 PHE138 ALA139 ALA140 GLY141 LYS142 THR143 ILE144 ALA145 THR146 THR147 GLY148 GLY149 HIS150 ALA151 ASP152 PRO153 THR154 ASN155 GLY156 LYS157 ALA158 VAL159 ASP160 ASP161 TYR162 ASP163 TYR164 PRO165 VAL166 PRO167 GLU168 GLN169 GLY170 VAL171 VAL172 ASN173 GLY174 PRO175 TYR176 GLU177 VAL178 TYR179 ALA180 ALA181 VAL182 ARG183 GLN184 ARG185 TYR186 LYS187 ASP188 GLY189 ALA190 ASP191 GLY192 ILE193 LYS194 ILE195 THR196 VAL197 THR198 GLY199 GLY200 VAL201 LEU202 SER203 VAL204 ALA205 LYS206 SER207 GLY208 GLN209 ASN210 PRO211 GLN212 PHE213 THR214 GLN215 GLU216 GLU217 VAL218 ASP219 ALA220 VAL221 VAL222 SER223 ALA224 ALA225 LYS226 ASP227 TYR228 GLY229 MSE230 TRP231 VAL232 ALA233 VAL234 HIS235 ALA236 HIS237 GLY238 ALA239 GLU240 GLY241 MSE242 LYS243 ARG244 ALA245 ILE246 LYS247 ALA248 GLY249 VAL250 ASP251 SER252 ILE253 GLU254 HIS255 GLY256 THR257 PHE258 MSE259 ASP260 LEU261 GLU262 ALA263 MSE264 ASP265 LEU266 MSE267 ILE268 GLU269 ASN270 GLY271 THR272 TYR273 TYR274 VAL275 PRO276 THR277 ILE278 SER279 ALA280 GLY281 GLU282 PHE283 VAL284 ALA285 GLU286 LYS287 SER288 LYS289 ILE290 ASP291 ASN292 PHE293 PHE294 PRO295 GLU296 ILE297 VAL298 ARG299 PRO300 LYS301 ALA302 ALA303 SER304 VAL305 GLY306 PRO307 GLN308 ILE309 SER310 ASP311 THR312 PHE313 ARG314 LYS315 ALA316 TYR317 GLU318 LYS319 GLY320 VAL321 LYS322 ILE323 ALA324 PHE325 GLY326 THR327 ASP328 ALA329 GLY330 VAL331 GLN332 LYS333 HIS334 GLY335 THR336 ASN337 TRP338 LYS339 GLU340 PHE341 VAL342 TYR343 MSE344 VAL345 GLU346 ASN347 GLY348 MSE349 PRO350 ALA351 MSE352 LYS353 ALA354 ILE355 GLN356 SER357 ALA358 THR359 MSE360 GLU361 THR362 ALA363 LYS364 LEU365 LEU366 ARG367 ILE368 GLU369 ASP370 LYS371 LEU372 GLY373 SER374 ILE375 GLU376 SER377 GLY378 LYS379 LEU380 ALA381 ASP382 LEU383 ILE384 ALA385 VAL386 LYS387 GLY388 ASN389 PRO390 ILE391 GLU392 ASP393 ILE394 SER395 VAL396 LEU397 GLU398 ASN399 VAL400 ASP401 VAL402 VAL403 ILE404 LYS405 ASP406 GLY407 LEU408 LEU409 TYR410 GLU411 GLY412
Unit 2 ASP6 SER7 LYS8 THR9 LEU10 ILE11 HIS12 ALA13 GLY14 LYS15 LEU16 ILE17 ASP18 GLY19 LYS20 SER21 ASP22 GLN23 VAL24 GLN25 SER26 ARG27 ILE28 SER29 ILE30 VAL31 ILE32 ASP33 GLY34 ASN35 ILE36 ILE37 SER38 ASP39 ILE40 LYS41 LYS42 GLY43 PHE44 ILE45 SER46 SER47 ASN48 ASP49 PHE50 GLU51 ASP52 TYR53 ILE54 ASP55 LEU56 ARG57 ASP58 HIS59 THR60 VAL61 LEU62 PRO63 GLY64 LEU65 MSE66 ASP67 MSE68 HIS69 VAL70 HIS71 PHE72 GLY73 GLN74 GLU75 TYR76 GLN77 SER78 LYS79 ALA80 GLN81 ALA82 PRO83 ILE84 LYS85 VAL86 GLU87 ARG88 GLU89 MSE90 GLN91 ALA92 ILE93 LEU94 ALA95 THR96 GLN97 HIS98 ALA99 TYR100 VAL101 THR102 PHE103 LYS104 SER105 GLY106 PHE107 THR108 THR109 VAL110 ARG111 GLN112 VAL113 GLY114 ASP115 SER116 GLY117 LEU118 VAL119 ALA120 ILE121 SER122 LEU123 ARG124 ASP125 ALA126 ILE127 ASN128 SER129 GLY130 LYS131 LEU132 ALA133 GLY134 PRO135 ARG136 ILE137 PHE138 ALA139 ALA140 GLY141 LYS142 THR143 ILE144 ALA145 THR146 THR147 GLY148 GLY149 HIS150 ALA151 ASP152 PRO153 THR154 ASN155 GLY156 LYS157 ALA158 VAL159 ASP160 ASP161 TYR162 ASP163 TYR164 PRO165 VAL166 PRO167 GLU168 GLN169 GLY170 VAL171 VAL172 ASN173 GLY174 PRO175 TYR176 GLU177 VAL178 TYR179 ALA180 ALA181 VAL182 ARG183 GLN184 ARG185 TYR186 LYS187 ASP188 GLY189 ALA190 ASP191 GLY192 ILE193 LYS194 ILE195 THR196 VAL197 THR198 GLY199 GLY200 VAL201 LEU202 SER203 VAL204 ALA205 LYS206 SER207 GLY208 GLN209 ASN210 PRO211 GLN212 PHE213 THR214 GLN215 GLU216 GLU217 VAL218 ASP219 ALA220 VAL221 VAL222 SER223 ALA224 ALA225 LYS226 ASP227 TYR228 GLY229 MSE230 TRP231 VAL232 ALA233 VAL234 HIS235 ALA236 HIS237 GLY238 ALA239 GLU240 GLY241 MSE242 LYS243 ARG244 ALA245 ILE246 LYS247 ALA248 GLY249 VAL250 ASP251 SER252 ILE253 GLU254 HIS255 GLY256 THR257 PHE258 MSE259 ASP260 LEU261 GLU262 ALA263 MSE264 ASP265 LEU266 MSE267 ILE268 GLU269 ASN270 GLY271 THR272 TYR273 TYR274 VAL275 PRO276 THR277 ILE278 SER279 ALA280 GLY281 GLU282 PHE283 VAL284 ALA285 GLU286 LYS287 SER288 LYS289 ILE290 ASP291 ASN292 PHE293 PHE294 PRO295 GLU296 ILE297 VAL298 ARG299 PRO300 LYS301 ALA302 ALA303 SER304 VAL305 GLY306 PRO307 GLN308 ILE309 SER310 ASP311 THR312 PHE313 ARG314 LYS315 ALA316 TYR317 GLU318 LYS319 GLY320 VAL321 LYS322 ILE323 ALA324 PHE325 GLY326 THR327 ASP328 ALA329 GLY330 VAL331 GLN332 LYS333 HIS334 GLY335 THR336 ASN337 TRP338 LYS339 GLU340 PHE341 VAL342 TYR343 MSE344 VAL345 GLU346 ASN347 GLY348 MSE349 PRO350 ALA351 MSE352 LYS353 ALA354 ILE355 GLN356 SER357 ALA358 THR359 MSE360 GLU361 THR362 ALA363 LYS364 LEU365 LEU366 ARG367 ILE368 GLU369 ASP370 LYS371 LEU372 GLY373 SER374 ILE375 GLU376 SER377 GLY378 LYS379 LEU380 ALA381 ASP382 LEU383 ILE384 ALA385 VAL386 LYS387 GLY388 ASN389 PRO390 ILE391 GLU392 ASP393 ILE394 SER395 VAL396 LEU397 GLU398 ASN399 VAL400 ASP401 VAL402 VAL403 ILE404 LYS405 ASP406 GLY407 LEU408 LEU409 TYR410
Unit 3 MG500 MET600
Unit 4 MG500 MET700

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany