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Title | CRYSTAL STRUCTURE OF T4 ENDONUCLEASE VII H43N MUTANT IN COMP HETERODUPLEX DNA CONTAINING BASE MISMATCHES | |
Keywords | T4 ENDONUCLEASE VII, ENDO VII, RESOLVASE, RESOLVING-ENZYME, MISMATCH, ALTERNATIVE INITIATION, CALCIUM, HYDROLASE, METAL ZINC, HYDROLASE-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2QNF | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | DNA (5'- D(*DCP*DAP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DGP*DAP*DGP*DCP* 3') | C | 16 | 326 | 0 |
2 | Other macromolecule | DNA (5'- D(*DGP*DCP*DGP*DCP*DTP*DCP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP* 3') | D | 16 | 324 | 0 |
3 | Other macromolecule | DNA (5'- D(*DCP*DGP*DGP*DCP*DTP*DCP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP* 3') | E | 16 | 324 | 0 |
4 | Other macromolecule | DNA (5'- D(*DCP*DAP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DGP*DAP*DGP*DCP* 3') | F | 16 | 326 | 0 |
5 | Protein | RECOMBINATION ENDONUCLEASE VII | A | 157 | 1270 | 0 |
6 | Protein | RECOMBINATION ENDONUCLEASE VII | B | 157 | 1270 | 0 |
7 | Ligand | RECOMBINATION ENDONUCLEASE VII | A | 1 | 0 | 1 |
8 | Ligand | RECOMBINATION ENDONUCLEASE VII | B | 1 | 0 | 1 |
total | 380 | 3840 | 2 |
Unit 5 | MET1 LEU2 LEU3 THR4 GLY5 LYS6 LEU7 TYR8 LYS9 GLU10 GLU11 LYS12 GLN13 LYS14 PHE15 TYR16 ASP17 ALA18 GLN19 ASN20 GLY21 LYS22 CYS23 LEU24 ILE25 CYS26 GLN27 ARG28 GLU29 LEU30 ASN31 PRO32 ASP33 VAL34 GLN35 ALA36 ASN37 HIS38 LEU39 ASP40 HIS41 ASP42 ASN43 GLU44 LEU45 ASN46 GLY47 PRO48 LYS49 ALA50 GLY51 LYS52 VAL53 ARG54 GLY55 LEU56 LEU57 CYS58 ASN59 LEU60 CYS61 ASN62 ALA63 ALA64 GLU65 GLY66 GLN67 MET68 LYS69 HIS70 LYS71 PHE72 ASN73 ARG74 SER75 GLY76 LEU77 LYS78 GLY79 GLN80 GLY81 VAL82 ASP83 TYR84 LEU85 GLU86 TRP87 LEU88 GLU89 ASN90 LEU91 LEU92 THR93 TYR94 LEU95 LYS96 SER97 ASP98 TYR99 THR100 GLN101 ASN102 ASN103 ILE104 HIS105 PRO106 ASN107 PHE108 VAL109 GLY110 ASP111 LYS112 SER113 LYS114 GLU115 PHE116 SER117 ARG118 LEU119 GLY120 LYS121 GLU122 GLU123 MET124 MET125 ALA126 GLU127 MET128 LEU129 GLN130 ARG131 GLY132 PHE133 GLU134 TYR135 ASN136 GLU137 SER138 ASP139 THR140 LYS141 THR142 GLN143 LEU144 ILE145 ALA146 SER147 PHE148 LYS149 LYS150 GLN151 LEU152 ARG153 LYS154 SER155 LEU156 LYS157 |
Unit 6 | MET1 LEU2 LEU3 THR4 GLY5 LYS6 LEU7 TYR8 LYS9 GLU10 GLU11 LYS12 GLN13 LYS14 PHE15 TYR16 ASP17 ALA18 GLN19 ASN20 GLY21 LYS22 CYS23 LEU24 ILE25 CYS26 GLN27 ARG28 GLU29 LEU30 ASN31 PRO32 ASP33 VAL34 GLN35 ALA36 ASN37 HIS38 LEU39 ASP40 HIS41 ASP42 ASN43 GLU44 LEU45 ASN46 GLY47 PRO48 LYS49 ALA50 GLY51 LYS52 VAL53 ARG54 GLY55 LEU56 LEU57 CYS58 ASN59 LEU60 CYS61 ASN62 ALA63 ALA64 GLU65 GLY66 GLN67 MET68 LYS69 HIS70 LYS71 PHE72 ASN73 ARG74 SER75 GLY76 LEU77 LYS78 GLY79 GLN80 GLY81 VAL82 ASP83 TYR84 LEU85 GLU86 TRP87 LEU88 GLU89 ASN90 LEU91 LEU92 THR93 TYR94 LEU95 LYS96 SER97 ASP98 TYR99 THR100 GLN101 ASN102 ASN103 ILE104 HIS105 PRO106 ASN107 PHE108 VAL109 GLY110 ASP111 LYS112 SER113 LYS114 GLU115 PHE116 SER117 ARG118 LEU119 GLY120 LYS121 GLU122 GLU123 MET124 MET125 ALA126 GLU127 MET128 LEU129 GLN130 ARG131 GLY132 PHE133 GLU134 TYR135 ASN136 GLU137 SER138 ASP139 THR140 LYS141 THR142 GLN143 LEU144 ILE145 ALA146 SER147 PHE148 LYS149 LYS150 GLN151 LEU152 ARG153 LYS154 SER155 LEU156 LYS157 |
Unit 1 | DC1 DA2 DC3 DA4 DT5 DC6 DG7 DA8 DT9 DG10 DG11 DA12 DG13 DC14 DC15 DG16 |
Unit 2 | DG1 DC2 DG3 DC4 DT5 DC6 DC7 DA8 DT9 DC10 DG11 DA12 DT13 DG14 DT15 DG16 |
Unit 3 | DC1 DG2 DG3 DC4 DT5 DC6 DC7 DA8 DT9 DC10 DG11 DA12 DT13 DG14 DT15 DG16 |
Unit 4 | DC1 DA2 DC3 DA4 DT5 DC6 DG7 DA8 DT9 DG10 DG11 DA12 DG13 DC14 DG15 DC16 |
Unit 7 | ZN158 |
Unit 8 | ZN158 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |