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| Title | CRYSTAL STRUCTURE OF GLUTAMATE DECARBOXYLASE DOMAIN OF DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4-DIAMINOBUTY DECARBOXYLASE FROM VIBRIO PARAHAEMOLYTICUS | |
| Keywords | STRUCTURAL GENOMICS, APC91511.1, GLUTAMATE DECARBOXYLASE, PS PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, AMINOTRANSFERASE, PYRIDOXAL PHOSPHATE, PYRU TRANSFERASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2QMA | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4- DIAMINOBUTYRATE DECARBOXYLASE | A | 463 | 3389 | 152 |
| 2 | Protein | DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4- DIAMINOBUTYRATE DECARBOXYLASE | B | 459 | 3360 | 152 |
| 3 | Ligand | DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4- DIAMINOBUTYRATE DECARBOXYLASE | A | 1 | 0 | 4 |
| 4 | Ligand | DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4- DIAMINOBUTYRATE DECARBOXYLASE | B | 1 | 0 | 4 |
| 5 | Water | 671 | 0 | 671 | ||
| total | 1595 | 6749 | 983 |
| Unit 1 | ALA475 PRO476 GLN477 GLU478 GLU479 TRP480 LYS481 LYS482 HIS483 PHE484 ILE485 HIS486 THR487 GLY488 GLU489 LEU490 GLY491 SER492 ALA493 GLU494 PHE495 ALA496 SER497 VAL498 MSE499 SER500 HIS501 THR502 THR503 SER504 ALA505 MSE506 LYS507 SER508 VAL509 PHE510 GLU511 GLN512 VAL513 ASN514 ALA515 PRO516 TYR517 SER518 GLY519 MSE520 ASP521 PRO522 LYS523 ALA524 LEU525 GLU526 ASP527 ALA528 ILE529 ASN530 ALA531 VAL532 ASP533 LEU534 ASP535 ASN536 LYS537 ASN538 ALA539 PRO540 LEU541 LYS542 SER543 VAL544 ILE545 ASP546 ASP547 VAL548 ALA549 GLU550 LEU551 VAL552 ALA553 LYS554 ASN555 ALA556 ILE557 PHE558 THR559 GLN560 HIS561 PRO562 ASP563 CYS564 ILE565 ALA566 HIS567 LEU568 HIS569 THR570 PRO571 PRO572 LEU573 MSE574 PRO575 ALA576 VAL577 ALA578 ALA579 GLU580 ALA581 MSE582 ILE583 ALA584 ALA585 LEU586 ASN587 GLN588 SER589 MSE590 ASP591 SER592 TRP593 ASP594 GLN595 ALA596 SER597 SER598 ALA599 THR600 TYR601 VAL602 GLU603 GLN604 LYS605 VAL606 VAL607 ASN608 TRP609 LEU610 CYS611 ASP612 LYS613 TYR614 ASP615 LEU616 SER617 GLU618 LYS619 ALA620 ASP621 GLY622 ILE623 PHE624 THR625 SER626 GLY627 GLY628 THR629 GLN630 SER631 ASN632 GLN633 MSE634 GLY635 LEU636 MSE637 LEU638 ALA639 ARG640 ASP641 TRP642 ILE643 ALA644 ASP645 LYS646 LEU647 SER648 GLY649 HIS650 SER651 ILE652 GLN653 LYS654 LEU655 GLY656 LEU657 PRO658 ASP659 TYR660 ALA661 ASP662 LYS663 LEU664 ARG665 ILE666 VAL667 CYS668 SER669 LYS670 LYS671 SER672 HIS673 PHE674 THR675 VAL676 GLN677 LYS678 SER679 ALA680 SER681 TRP682 MSE683 GLY684 LEU685 GLY686 GLU687 LYS688 ALA689 VAL690 MSE691 THR692 VAL693 ASP694 ALA695 ASN696 ALA697 ASP698 GLY699 THR700 MSE701 ASP702 ILE703 THR704 LYS705 LEU706 ASP707 GLU708 VAL709 ILE710 ALA711 GLN712 ALA713 LYS714 ALA715 GLU716 GLY717 LEU718 ILE719 PRO720 PHE721 ALA722 ILE723 VAL724 GLY725 THR726 ALA727 GLY728 THR729 THR730 ASP731 HIS732 GLY733 ALA734 ILE735 ASP736 ASP737 LEU738 ASP739 PHE740 ILE741 ALA742 ASP743 MSE744 ALA745 VAL746 LYS747 HIS748 ASP749 MSE750 TRP751 MSE752 HIS753 VAL754 ASP755 GLY756 ALA757 TYR758 GLY759 GLY760 ALA761 LEU762 ILE763 LEU764 SER765 SER766 HIS767 LYS768 SER769 ARG770 LEU771 LYS772 GLY773 VAL774 GLU775 ARG776 ALA777 HIS778 SER779 ILE780 SER781 VAL782 ASP783 PHE784 HIS785 LYS786 LEU787 PHE788 TYR789 GLN790 THR791 ILE792 SER793 CYS794 GLY795 ALA796 LEU797 LEU798 VAL799 ASN800 ASP801 LYS802 SER803 ASN804 PHE805 LYS806 PHE807 LEU808 LEU809 HIS810 ALA831 THR832 THR833 LYS834 ARG835 PHE836 ASP837 ALA838 LEU839 LYS840 VAL841 PHE842 MSE843 THR844 MSE845 GLN846 ASN847 VAL848 GLY849 PRO850 LYS851 ALA852 LEU853 GLY854 ASP855 MSE856 TYR857 ASP858 HIS859 LEU860 LEU861 ALA862 GLN863 THR864 LEU865 GLU866 VAL867 ALA868 ASP869 MSE870 ILE871 ARG872 THR873 ASN874 ASP875 GLN876 PHE877 GLU878 LEU879 LEU880 ALA881 GLU882 PRO883 SER884 LEU885 SER886 THR887 VAL888 LEU889 PHE890 ARG891 ALA892 THR893 HIS894 GLU895 THR896 ALA897 ASP898 LEU899 ASP900 GLU901 LEU902 ASN903 LYS904 ALA905 LEU906 ARG907 LEU908 GLU909 ALA910 LEU911 THR912 ARG913 GLY914 ILE915 ALA916 VAL917 LEU918 GLY919 GLU920 THR921 ILE922 VAL923 ASP924 GLY925 LYS926 THR927 ALA928 LEU929 LYS930 PHE931 THR932 ILE933 LEU934 ASN935 PRO936 CYS937 LEU938 THR939 THR940 SER941 ASP942 PHE943 GLU944 SER945 LEU946 LEU947 SER948 LYS949 ILE950 ASN951 MSE952 LEU953 ALA954 VAL955 GLU956 LEU957 |
| Unit 2 | ALA475 PRO476 GLN477 GLU478 GLU479 TRP480 LYS481 LYS482 HIS483 PHE484 ILE485 HIS486 THR487 GLY488 GLU489 LEU490 GLY491 SER492 ALA493 GLU494 PHE495 ALA496 SER497 VAL498 MSE499 SER500 HIS501 THR502 THR503 SER504 ALA505 MSE506 LYS507 SER508 VAL509 PHE510 GLU511 GLN512 VAL513 ASN514 ALA515 PRO516 TYR517 SER518 GLY519 MSE520 ASP521 PRO522 LYS523 ALA524 LEU525 GLU526 ASP527 ALA528 ILE529 ASN530 ALA531 VAL532 ASP533 LEU534 ASP535 ASN536 LYS537 ASN538 ALA539 PRO540 LEU541 LYS542 SER543 VAL544 ILE545 ASP546 ASP547 VAL548 ALA549 GLU550 LEU551 VAL552 ALA553 LYS554 ASN555 ALA556 ILE557 PHE558 THR559 GLN560 HIS561 PRO562 ASP563 CYS564 ILE565 ALA566 HIS567 LEU568 HIS569 THR570 PRO571 PRO572 LEU573 MSE574 PRO575 ALA576 VAL577 ALA578 ALA579 GLU580 ALA581 MSE582 ILE583 ALA584 ALA585 LEU586 ASN587 GLN588 SER589 MSE590 ASP591 SER592 TRP593 ASP594 GLN595 ALA596 SER597 SER598 ALA599 THR600 TYR601 VAL602 GLU603 GLN604 LYS605 VAL606 VAL607 ASN608 TRP609 LEU610 CYS611 ASP612 LYS613 TYR614 ASP615 LEU616 SER617 GLU618 LYS619 ALA620 ASP621 GLY622 ILE623 PHE624 THR625 SER626 GLY627 GLY628 THR629 GLN630 SER631 ASN632 GLN633 MSE634 GLY635 LEU636 MSE637 LEU638 ALA639 ARG640 ASP641 TRP642 ILE643 ALA644 ASP645 LYS646 LEU647 SER648 GLY649 HIS650 SER651 ILE652 GLN653 LYS654 LEU655 GLY656 LEU657 PRO658 ASP659 TYR660 ALA661 ASP662 LYS663 LEU664 ARG665 ILE666 VAL667 CYS668 SER669 LYS670 LYS671 SER672 HIS673 PHE674 THR675 VAL676 GLN677 LYS678 SER679 ALA680 SER681 TRP682 MSE683 GLY684 LEU685 GLY686 GLU687 LYS688 ALA689 VAL690 MSE691 THR692 VAL693 ASP694 ALA695 ASN696 ALA697 ASP698 GLY699 THR700 MSE701 ASP702 ILE703 THR704 LYS705 LEU706 ASP707 GLU708 VAL709 ILE710 ALA711 GLN712 ALA713 LYS714 ALA715 GLU716 GLY717 LEU718 ILE719 PRO720 PHE721 ALA722 ILE723 VAL724 GLY725 THR726 ALA727 GLY728 THR729 THR730 ASP731 HIS732 GLY733 ALA734 ILE735 ASP736 ASP737 LEU738 ASP739 PHE740 ILE741 ALA742 ASP743 MSE744 ALA745 VAL746 LYS747 HIS748 ASP749 MSE750 TRP751 MSE752 HIS753 VAL754 ASP755 GLY756 ALA757 TYR758 GLY759 GLY760 ALA761 LEU762 ILE763 LEU764 SER765 SER766 HIS767 LYS768 SER769 ARG770 LEU771 LYS772 GLY773 VAL774 GLU775 ARG776 ALA777 HIS778 SER779 ILE780 SER781 VAL782 ASP783 PHE784 HIS785 LYS786 LEU787 PHE788 TYR789 GLN790 THR791 ILE792 SER793 CYS794 GLY795 ALA796 LEU797 LEU798 VAL799 ASN800 ASP801 LYS802 SER803 ASN804 PHE805 LYS806 PHE807 LEU808 LEU809 LYS834 ARG835 PHE836 ASP837 ALA838 LEU839 LYS840 VAL841 PHE842 MSE843 THR844 MSE845 GLN846 ASN847 VAL848 GLY849 PRO850 LYS851 ALA852 LEU853 GLY854 ASP855 MSE856 TYR857 ASP858 HIS859 LEU860 LEU861 ALA862 GLN863 THR864 LEU865 GLU866 VAL867 ALA868 ASP869 MSE870 ILE871 ARG872 THR873 ASN874 ASP875 GLN876 PHE877 GLU878 LEU879 LEU880 ALA881 GLU882 PRO883 SER884 LEU885 SER886 THR887 VAL888 LEU889 PHE890 ARG891 ALA892 THR893 HIS894 GLU895 THR896 ALA897 ASP898 LEU899 ASP900 GLU901 LEU902 ASN903 LYS904 ALA905 LEU906 ARG907 LEU908 GLU909 ALA910 LEU911 THR912 ARG913 GLY914 ILE915 ALA916 VAL917 LEU918 GLY919 GLU920 THR921 ILE922 VAL923 ASP924 GLY925 LYS926 THR927 ALA928 LEU929 LYS930 PHE931 THR932 ILE933 LEU934 ASN935 PRO936 CYS937 LEU938 THR939 THR940 SER941 ASP942 PHE943 GLU944 SER945 LEU946 LEU947 SER948 LYS949 ILE950 ASN951 MSE952 LEU953 ALA954 VAL955 GLU956 LEU957 |
| Unit 3 | EDO961 |
| Unit 4 | EDO962 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |