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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF GLYCEROL-3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI
Keywords GLYCEROL-3-PHOSHATE DEHYDROGENASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2QCU     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AEROBIC GLYCEROL-3-PHOSPHATE DEHYDROGENASE  A 499 3990 0
2  Protein   AEROBIC GLYCEROL-3-PHOSPHATE DEHYDROGENASE  B 501 4007 0
3  Ligand   AEROBIC GLYCEROL-3-PHOSPHATE DEHYDROGENASE  A 27 0 240
4  Ligand   AEROBIC GLYCEROL-3-PHOSPHATE DEHYDROGENASE  B 22 0 179
5 Water     476 0 476
total       1525 7997 895

Proteins
Unit 1 THR3 LYS4 ASP5 LEU6 ILE7 VAL8 ILE9 GLY10 GLY11 GLY12 ILE13 ASN14 GLY15 ALA16 GLY17 ILE18 ALA19 ALA20 ASP21 ALA22 ALA23 GLY24 ARG25 GLY26 LEU27 SER28 VAL29 LEU30 MET31 LEU32 GLU33 ALA34 GLN35 ASP36 LEU37 ALA38 CYS39 ALA40 THR41 SER42 SER43 ALA44 SER45 SER46 LYS47 LEU48 ILE49 HIS50 GLY51 GLY52 LEU53 ARG54 TYR55 LEU56 GLU57 HIS58 TYR59 GLU60 PHE61 ARG62 LEU63 VAL64 SER65 GLU66 ALA67 LEU68 ALA69 GLU70 ARG71 GLU72 VAL73 LEU74 LEU75 LYS76 MET77 ALA78 PRO79 HIS80 ILE81 ALA82 PHE83 PRO84 MET85 ARG86 PHE87 ARG88 LEU89 PRO90 HIS91 ARG92 PRO93 HIS94 LEU95 ARG96 PRO97 ALA98 TRP99 MET100 ILE101 ARG102 ILE103 GLY104 LEU105 PHE106 MET107 TYR108 ASP109 HIS110 LEU111 GLY112 LYS113 ARG114 THR115 SER116 LEU117 PRO118 GLY119 SER120 THR121 GLY122 LEU123 ARG124 PHE125 GLY126 ALA127 ASN128 SER129 VAL130 LEU131 LYS132 PRO133 GLU134 ILE135 LYS136 ARG137 GLY138 PHE139 GLU140 TYR141 SER142 ASP143 CYS144 TRP145 VAL146 ASP147 ASP148 ALA149 ARG150 LEU151 VAL152 LEU153 ALA154 ASN155 ALA156 GLN157 MET158 VAL159 VAL160 ARG161 LYS162 GLY163 GLY164 GLU165 VAL166 LEU167 THR168 ARG169 THR170 ARG171 ALA172 THR173 SER174 ALA175 ARG176 ARG177 GLU178 ASN179 GLY180 LEU181 TRP182 ILE183 VAL184 GLU185 ALA186 GLU187 ASP188 ILE189 ASP190 THR191 GLY192 LYS193 LYS194 TYR195 SER196 TRP197 GLN198 ALA199 ARG200 GLY201 LEU202 VAL203 ASN204 ALA205 THR206 GLY207 PRO208 TRP209 VAL210 LYS211 GLN212 PHE213 PHE214 ASP215 ASP216 GLY217 MET218 HIS219 LEU220 PRO221 SER222 PRO223 TYR224 GLY225 ILE226 ARG227 LEU228 ILE229 LYS230 GLY231 SER232 HIS233 ILE234 VAL235 VAL236 PRO237 ARG238 VAL239 HIS240 THR241 GLN242 LYS243 GLN244 ALA245 TYR246 ILE247 LEU248 GLN249 ASN250 GLU251 ASP252 LYS253 ARG254 ILE255 VAL256 PHE257 VAL258 ILE259 PRO260 TRP261 MET262 ASP263 GLU264 PHE265 SER266 ILE267 ILE268 GLY269 THR270 THR271 ASP272 VAL273 GLU274 TYR275 LYS276 GLY277 ASP278 PRO279 LYS280 ALA281 VAL282 LYS283 ILE284 GLU285 GLU286 SER287 GLU288 ILE289 ASN290 TYR291 LEU292 LEU293 ASN294 VAL295 TYR296 ASN297 THR298 HIS299 PHE300 LYS301 LYS302 GLN303 LEU304 SER305 ARG306 ASP307 ASP308 ILE309 VAL310 TRP311 THR312 TYR313 SER314 GLY315 VAL316 ARG317 PRO318 LEU319 CYS320 ASP321 ASP322 GLU323 SER324 ASP325 SER326 PRO327 GLN328 ALA329 ILE330 THR331 ARG332 ASP333 TYR334 THR335 LEU336 ASP337 ILE338 HIS339 ASP340 GLU341 ASN342 GLY343 LYS344 ALA345 PRO346 LEU347 LEU348 SER349 VAL350 PHE351 GLY352 GLY353 LYS354 LEU355 THR356 THR357 TYR358 ARG359 LYS360 LEU361 ALA362 GLU363 HIS364 ALA365 LEU366 GLU367 LYS368 LEU369 THR370 PRO371 TYR372 TYR373 GLN374 GLY375 ILE376 GLY377 PRO378 ALA379 TRP380 THR381 LYS382 GLU383 SER384 VAL385 LEU386 PRO387 GLY388 GLY389 ALA390 ILE391 GLU392 GLY393 ASP394 ARG395 ASP396 ASP397 TYR398 ALA399 ALA400 ARG401 LEU402 ARG403 ARG404 ARG405 TYR406 PRO407 PHE408 LEU409 THR410 GLU411 SER412 LEU413 ALA414 ARG415 HIS416 TYR417 ALA418 ARG419 THR420 TYR421 GLY422 SER423 ASN424 SER425 GLU426 LEU427 LEU428 LEU429 GLY430 ASN431 ALA432 GLY433 THR434 VAL435 SER436 ASP437 LEU438 GLY439 GLU440 ASP441 PHE442 GLY443 HIS444 GLU445 PHE446 TYR447 GLU448 ALA449 GLU450 LEU451 LYS452 TYR453 LEU454 VAL455 ASP456 HIS457 GLU458 TRP459 VAL460 ARG461 ARG462 ALA463 ASP464 ASP465 ALA466 LEU467 TRP468 ARG469 ARG470 THR471 LYS472 GLN473 GLY474 MET475 TRP476 LEU477 ASN478 ALA479 ASP480 GLN481 GLN482 SER483 ARG484 VAL485 SER486 GLN487 TRP488 LEU489 VAL490 GLU491 TYR492 THR493 GLN494 GLN495 ARG496 LEU497 SER498 LEU499 ALA500 SER501
Unit 2 MET1 GLU2 THR3 LYS4 ASP5 LEU6 ILE7 VAL8 ILE9 GLY10 GLY11 GLY12 ILE13 ASN14 GLY15 ALA16 GLY17 ILE18 ALA19 ALA20 ASP21 ALA22 ALA23 GLY24 ARG25 GLY26 LEU27 SER28 VAL29 LEU30 MET31 LEU32 GLU33 ALA34 GLN35 ASP36 LEU37 ALA38 CYS39 ALA40 THR41 SER42 SER43 ALA44 SER45 SER46 LYS47 LEU48 ILE49 HIS50 GLY51 GLY52 LEU53 ARG54 TYR55 LEU56 GLU57 HIS58 TYR59 GLU60 PHE61 ARG62 LEU63 VAL64 SER65 GLU66 ALA67 LEU68 ALA69 GLU70 ARG71 GLU72 VAL73 LEU74 LEU75 LYS76 MET77 ALA78 PRO79 HIS80 ILE81 ALA82 PHE83 PRO84 MET85 ARG86 PHE87 ARG88 LEU89 PRO90 HIS91 ARG92 PRO93 HIS94 LEU95 ARG96 PRO97 ALA98 TRP99 MET100 ILE101 ARG102 ILE103 GLY104 LEU105 PHE106 MET107 TYR108 ASP109 HIS110 LEU111 GLY112 LYS113 ARG114 THR115 SER116 LEU117 PRO118 GLY119 SER120 THR121 GLY122 LEU123 ARG124 PHE125 GLY126 ALA127 ASN128 SER129 VAL130 LEU131 LYS132 PRO133 GLU134 ILE135 LYS136 ARG137 GLY138 PHE139 GLU140 TYR141 SER142 ASP143 CYS144 TRP145 VAL146 ASP147 ASP148 ALA149 ARG150 LEU151 VAL152 LEU153 ALA154 ASN155 ALA156 GLN157 MET158 VAL159 VAL160 ARG161 LYS162 GLY163 GLY164 GLU165 VAL166 LEU167 THR168 ARG169 THR170 ARG171 ALA172 THR173 SER174 ALA175 ARG176 ARG177 GLU178 ASN179 GLY180 LEU181 TRP182 ILE183 VAL184 GLU185 ALA186 GLU187 ASP188 ILE189 ASP190 THR191 GLY192 LYS193 LYS194 TYR195 SER196 TRP197 GLN198 ALA199 ARG200 GLY201 LEU202 VAL203 ASN204 ALA205 THR206 GLY207 PRO208 TRP209 VAL210 LYS211 GLN212 PHE213 PHE214 ASP215 ASP216 GLY217 MET218 HIS219 LEU220 PRO221 SER222 PRO223 TYR224 GLY225 ILE226 ARG227 LEU228 ILE229 LYS230 GLY231 SER232 HIS233 ILE234 VAL235 VAL236 PRO237 ARG238 VAL239 HIS240 THR241 GLN242 LYS243 GLN244 ALA245 TYR246 ILE247 LEU248 GLN249 ASN250 GLU251 ASP252 LYS253 ARG254 ILE255 VAL256 PHE257 VAL258 ILE259 PRO260 TRP261 MET262 ASP263 GLU264 PHE265 SER266 ILE267 ILE268 GLY269 THR270 THR271 ASP272 VAL273 GLU274 TYR275 LYS276 GLY277 ASP278 PRO279 LYS280 ALA281 VAL282 LYS283 ILE284 GLU285 GLU286 SER287 GLU288 ILE289 ASN290 TYR291 LEU292 LEU293 ASN294 VAL295 TYR296 ASN297 THR298 HIS299 PHE300 LYS301 LYS302 GLN303 LEU304 SER305 ARG306 ASP307 ASP308 ILE309 VAL310 TRP311 THR312 TYR313 SER314 GLY315 VAL316 ARG317 PRO318 LEU319 CYS320 ASP321 ASP322 GLU323 SER324 ASP325 SER326 PRO327 GLN328 ALA329 ILE330 THR331 ARG332 ASP333 TYR334 THR335 LEU336 ASP337 ILE338 HIS339 ASP340 GLU341 ASN342 GLY343 LYS344 ALA345 PRO346 LEU347 LEU348 SER349 VAL350 PHE351 GLY352 GLY353 LYS354 LEU355 THR356 THR357 TYR358 ARG359 LYS360 LEU361 ALA362 GLU363 HIS364 ALA365 LEU366 GLU367 LYS368 LEU369 THR370 PRO371 TYR372 TYR373 GLN374 GLY375 ILE376 GLY377 PRO378 ALA379 TRP380 THR381 LYS382 GLU383 SER384 VAL385 LEU386 PRO387 GLY388 GLY389 ALA390 ILE391 GLU392 GLY393 ASP394 ARG395 ASP396 ASP397 TYR398 ALA399 ALA400 ARG401 LEU402 ARG403 ARG404 ARG405 TYR406 PRO407 PHE408 LEU409 THR410 GLU411 SER412 LEU413 ALA414 ARG415 HIS416 TYR417 ALA418 ARG419 THR420 TYR421 GLY422 SER423 ASN424 SER425 GLU426 LEU427 LEU428 LEU429 GLY430 ASN431 ALA432 GLY433 THR434 VAL435 SER436 ASP437 LEU438 GLY439 GLU440 ASP441 PHE442 GLY443 HIS444 GLU445 PHE446 TYR447 GLU448 ALA449 GLU450 LEU451 LYS452 TYR453 LEU454 VAL455 ASP456 HIS457 GLU458 TRP459 VAL460 ARG461 ARG462 ALA463 ASP464 ASP465 ALA466 LEU467 TRP468 ARG469 ARG470 THR471 LYS472 GLN473 GLY474 MET475 TRP476 LEU477 ASN478 ALA479 ASP480 GLN481 GLN482 SER483 ARG484 VAL485 SER486 GLN487 TRP488 LEU489 VAL490 GLU491 TYR492 THR493 GLN494 GLN495 ARG496 LEU497 SER498 LEU499 ALA500 SER501

Ligands
Unit 3 FAD600 BOG700 BOG701 BOG800 BOG801 SO4802 SO4803 PO4804 TAM805 EDO806 IMD807 EDO808 EDO809 EDO810 EDO811 EDO812 EDO813 EDO814 EDO815 EDO816 EDO817 EDO818 EDO819 EDO820 IMD821 EDO822 TAM823
Unit 4 FAD600 BOG700 BOG800 SO4801 SO4802 PO4803 EDO804 EDO805 EDO806 EDO807 EDO808 EDO809 TAM810 EDO811 EDO812 EDO813 EDO814 EDO815 EDO816 EDO817 EDO819 EDO820

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany