2Q86 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE MOUSE INVARIANT NKT CELL RECEPTOR VALPHA14
• Keywords: INKT CELLS, TCR, GLYCOLIPID RECOGNITION, INNATE IMMUNITY, IM SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2Q86	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	VALPHA14 TCR	A	189	1470	0
2	Protein	VBETA8.2	B	233	1824	0
3	Protein	VALPHA14 TCR	C	190	1471	0
4	Protein	VBETA8.2	D	233	1824	0
5	Ligand		E	5	0	60
6	Ligand		F	4	0	49
7	Ligand	VBETA8.2	B	1	0	14
8	Water			546	0	546
total				1401	6589	669

Proteins

Unit 1	LYS 0 THR 1 GLN 2 VAL 3 GLU 4 GLN 5 SER 6 PRO 7 GLN 8 SER 9 LEU 10 VAL 11 VAL 12 ARG 13 GLN 14 GLY 15 GLU 16 ASN 17 CYS 18 VAL 19 LEU 20 GLN 21 CYS 22 ASN 23 TYR 24 SER 25 VAL 26 THR 27 PRO 28 ASP 29 ASN 30 HIS 31 LEU 32 ARG 33 TRP 34 TYR 35 LYS 36 GLN 37 ASP 38 THR 39 GLY 40 LYS 41 GLY 42 LEU 43 VAL 44 LEU 45 LEU 46 THR 47 VAL 48 LEU 49 VAL 50 ASP 51 GLN 52 LYS 53 ASP 54 LYS 55 THR 56 SER 57 ASN 58 GLY 59 ARG 60 TYR 61 SER 62 ALA 63 THR 64 LEU 65 ASP 66 LYS 67 ASP 68 ALA 69 LYS 70 HIS 71 SER 72 THR 73 LEU 74 HIS 75 ILE 76 THR 77 ALA 78 THR 79 LEU 80 LEU 81 ASP 82 ASP 83 THR 84 ALA 85 THR 86 TYR 87 PHE 88 CYS 89 VAL 90 VAL 91 GLY 92 ASP 93 ARG 94 GLY 95 SER 96 ALA 97 LEU 98 PHE 99 GLY 100 SER 101 GLY 102 THR 103 GLN 104 LEU 105 ILE 106 VAL 107 ILE 108 PRO 109 TYR 110 ILE 111 GLN 112 ASN 113 PRO 114 GLU 115 PRO 116 ALA 117 VAL 118 TYR 119 GLN 120 LEU 121 LYS 122 ASP 123 PRO 124 ARG 125 SER 126 GLN 127 ASP 128 SER 129 THR 130 LEU 131 CYS 132 LEU 133 PHE 134 THR 135 ASP 136 PHE 137 ASP 138 SER 139 GLN 140 ILE 141 ASN 142 VAL 143 PRO 144 LYS 145 THR 146 MET 147 GLU 148 SER 149 GLY 150 THR 151 PHE 152 ILE 153 THR 154 ASP 155 LYS 156 CYS 157 VAL 158 LEU 159 ASP 160 MET 161 LYS 162 SER 166 LYS 167 SER 168 ASN 169 GLY 170 ALA 171 ILE 172 ALA 173 TRP 174 SER 175 ASN 176 GLN 177 THR 178 SER 179 PHE 180 THR 181 CYS 182 GLN 183 ASP 184 ILE 185 PHE 186 LYS 187 GLU 188 THR 189 ASN 190 ALA 191
Unit 2	ALA 3 VAL 4 THR 5 GLN 6 SER 7 PRO 8 ARG 9 ASN 10 LYS 11 VAL 12 ALA 13 VAL 14 THR 15 GLY 16 GLY 17 LYS 18 VAL 19 THR 20 LEU 21 SER 22 CYS 23 ASN 24 GLN 25 THR 26 ASN 27 ASN 28 HIS 29 ASN 30 ASN 31 MET 32 TYR 33 TRP 34 TYR 35 ARG 36 GLN 37 ASP 38 THR 39 GLY 40 HIS 41 GLY 42 LEU 43 ARG 44 LEU 45 ILE 46 HIS 47 TYR 48 SER 49 TYR 50 GLY 51 ALA 52 GLY 53 SER 54 THR 55 GLU 56 LYS 57 GLY 58 ASP 59 ILE 60 PRO 61 ASP 62 GLY 63 TYR 64 LYS 65 ALA 66 SER 67 ARG 68 PRO 69 SER 70 GLN 71 GLU 72 ASN 73 PHE 74 SER 75 LEU 76 ILE 77 LEU 78 GLU 79 LEU 80 ALA 81 THR 82 PRO 83 SER 84 GLN 85 THR 86 SER 87 VAL 88 TYR 89 PHE 90 CYS 91 ALA 92 SER 93 GLY 94 GLY 95 GLY 96 GLY 97 THR 98 LEU 99 TYR 100 PHE 101 GLY 102 ALA 103 GLY 104 THR 105 ARG 106 LEU 107 SER 108 VAL 109 LEU 110 GLU 111 ASP 112 LEU 113 ARG 114 ASN 115 VAL 116 THR 117 PRO 118 PRO 119 LYS 120 VAL 121 SER 122 LEU 123 PHE 124 GLU 125 PRO 126 SER 127 LYS 128 ALA 129 GLU 130 ILE 131 ALA 132 ASN 133 LYS 134 GLN 135 LYS 136 ALA 137 THR 138 LEU 139 VAL 140 CYS 141 LEU 142 ALA 143 ARG 144 GLY 145 PHE 146 PHE 147 PRO 148 ASP 149 HIS 150 VAL 151 GLU 152 LEU 153 SER 154 TRP 155 TRP 156 VAL 157 ASN 158 GLY 159 LYS 160 GLU 161 VAL 162 HIS 163 SER 164 GLY 165 VAL 166 CYS 167 THR 168 ASP 169 PRO 170 GLN 171 ALA 172 TYR 173 LYS 174 GLU 175 SER 176 ASN 177 TYR 178 SER 179 TYR 180 CYS 181 LEU 182 SER 183 SER 184 ARG 185 LEU 186 ARG 187 VAL 188 SER 189 ALA 190 THR 191 PHE 192 TRP 193 HIS 194 ASN 195 PRO 196 ARG 197 ASN 198 HIS 199 PHE 200 ARG 201 CYS 202 GLN 203 VAL 204 GLN 205 PHE 206 HIS 207 GLY 208 LEU 209 SER 210 GLU 211 GLU 212 ASP 213 LYS 214 TRP 215 PRO 216 GLU 217 GLY 218 SER 219 PRO 220 LYS 221 PRO 222 VAL 223 THR 224 GLN 225 ASN 226 ILE 227 SER 228 ALA 229 GLU 230 ALA 231 TRP 232 GLY 233 ARG 234 ALA 235
Unit 3	LYS 0 THR 1 GLN 2 VAL 3 GLU 4 GLN 5 SER 6 PRO 7 GLN 8 SER 9 LEU 10 VAL 11 VAL 12 ARG 13 GLN 14 GLY 15 GLU 16 ASN 17 CYS 18 VAL 19 LEU 20 GLN 21 CYS 22 ASN 23 TYR 24 SER 25 VAL 26 THR 27 PRO 28 ASP 29 ASN 30 HIS 31 LEU 32 ARG 33 TRP 34 TYR 35 LYS 36 GLN 37 ASP 38 THR 39 GLY 40 LYS 41 GLY 42 LEU 43 VAL 44 LEU 45 LEU 46 THR 47 VAL 48 LEU 49 VAL 50 ASP 51 GLN 52 LYS 53 ASP 54 LYS 55 THR 56 SER 57 ASN 58 GLY 59 ARG 60 TYR 61 SER 62 ALA 63 THR 64 LEU 65 ASP 66 LYS 67 ASP 68 ALA 69 LYS 70 HIS 71 SER 72 THR 73 LEU 74 HIS 75 ILE 76 THR 77 ALA 78 THR 79 LEU 80 LEU 81 ASP 82 ASP 83 THR 84 ALA 85 THR 86 TYR 87 PHE 88 CYS 89 VAL 90 VAL 91 GLY 92 ASP 93 ARG 94 GLY 95 SER 96 ALA 97 LEU 98 PHE 99 GLY 100 SER 101 GLY 102 THR 103 GLN 104 LEU 105 ILE 106 VAL 107 ILE 108 PRO 109 TYR 110 ILE 111 GLN 112 ASN 113 PRO 114 GLU 115 PRO 116 ALA 117 VAL 118 TYR 119 GLN 120 LEU 121 LYS 122 ASP 123 PRO 124 ARG 125 SER 126 GLN 127 ASP 128 SER 129 THR 130 LEU 131 CYS 132 LEU 133 PHE 134 THR 135 ASP 136 PHE 137 ASP 138 SER 139 GLN 140 ILE 141 ASN 142 VAL 143 PRO 144 LYS 145 THR 146 MET 147 GLU 148 SER 149 GLY 150 THR 151 PHE 152 ILE 153 THR 154 ASP 155 LYS 156 CYS 157 VAL 158 LEU 159 ASP 160 MET 161 LYS 162 SER 166 LYS 167 SER 168 ASN 169 GLY 170 ALA 171 ILE 172 ALA 173 TRP 174 SER 175 ASN 176 GLN 177 THR 178 SER 179 PHE 180 THR 181 CYS 182 GLN 183 ASP 184 ILE 185 PHE 186 LYS 187 GLU 188 THR 189 ASN 190 ALA 191 THR 192
Unit 4	ALA 3 VAL 4 THR 5 GLN 6 SER 7 PRO 8 ARG 9 ASN 10 LYS 11 VAL 12 ALA 13 VAL 14 THR 15 GLY 16 GLY 17 LYS 18 VAL 19 THR 20 LEU 21 SER 22 CYS 23 ASN 24 GLN 25 THR 26 ASN 27 ASN 28 HIS 29 ASN 30 ASN 31 MET 32 TYR 33 TRP 34 TYR 35 ARG 36 GLN 37 ASP 38 THR 39 GLY 40 HIS 41 GLY 42 LEU 43 ARG 44 LEU 45 ILE 46 HIS 47 TYR 48 SER 49 TYR 50 GLY 51 ALA 52 GLY 53 SER 54 THR 55 GLU 56 LYS 57 GLY 58 ASP 59 ILE 60 PRO 61 ASP 62 GLY 63 TYR 64 LYS 65 ALA 66 SER 67 ARG 68 PRO 69 SER 70 GLN 71 GLU 72 ASN 73 PHE 74 SER 75 LEU 76 ILE 77 LEU 78 GLU 79 LEU 80 ALA 81 THR 82 PRO 83 SER 84 GLN 85 THR 86 SER 87 VAL 88 TYR 89 PHE 90 CYS 91 ALA 92 SER 93 GLY 94 GLY 95 GLY 96 GLY 97 THR 98 LEU 99 TYR 100 PHE 101 GLY 102 ALA 103 GLY 104 THR 105 ARG 106 LEU 107 SER 108 VAL 109 LEU 110 GLU 111 ASP 112 LEU 113 ARG 114 ASN 115 VAL 116 THR 117 PRO 118 PRO 119 LYS 120 VAL 121 SER 122 LEU 123 PHE 124 GLU 125 PRO 126 SER 127 LYS 128 ALA 129 GLU 130 ILE 131 ALA 132 ASN 133 LYS 134 GLN 135 LYS 136 ALA 137 THR 138 LEU 139 VAL 140 CYS 141 LEU 142 ALA 143 ARG 144 GLY 145 PHE 146 PHE 147 PRO 148 ASP 149 HIS 150 VAL 151 GLU 152 LEU 153 SER 154 TRP 155 TRP 156 VAL 157 ASN 158 GLY 159 LYS 160 GLU 161 VAL 162 HIS 163 SER 164 GLY 165 VAL 166 CYS 167 THR 168 ASP 169 PRO 170 GLN 171 ALA 172 TYR 173 LYS 174 GLU 175 SER 176 ASN 177 TYR 178 SER 179 TYR 180 CYS 181 LEU 182 SER 183 SER 184 ARG 185 LEU 186 ARG 187 VAL 188 SER 189 ALA 190 THR 191 PHE 192 TRP 193 HIS 194 ASN 195 PRO 196 ARG 197 ASN 198 HIS 199 PHE 200 ARG 201 CYS 202 GLN 203 VAL 204 GLN 205 PHE 206 HIS 207 GLY 208 LEU 209 SER 210 GLU 211 GLU 212 ASP 213 LYS 214 TRP 215 PRO 216 GLU 217 GLY 218 SER 219 PRO 220 LYS 221 PRO 222 VAL 223 THR 224 GLN 225 ASN 226 ILE 227 SER 228 ALA 229 GLU 230 ALA 231 TRP 232 GLY 233 ARG 234 ALA 235

Ligands

Unit 5	NAG 1 NAG 2 BMA 3 MAN 4 FUC 5
Unit 6	NAG 1 NAG 2 BMA 3 FUC 4
Unit 7	NAG 510