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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE F PLASMID TRAI RELAXASE DOMAIN WITH SCISSILE THYMIDINE BASE
Keywords RELAXASE, HYDROLASE, CONJUGATION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2Q7T     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN TRAI  A 267 2077 0
2  Protein   PROTEIN TRAI  B 265 2065 0
3  Ligand   PROTEIN TRAI  A 1 0 1
4  Ligand   PROTEIN TRAI  B 2 0 21
5 Water     157 0 157
total       692 4142 179

Proteins
Unit 1 MET1 MET2 SER3 ILE4 ALA5 GLN6 VAL7 ARG8 SER9 ALA10 GLY11 SER12 ALA13 GLY14 ASN15 PHE16 TYR17 THR18 ASP19 LYS20 ASP21 ASN22 TYR23 TYR24 VAL25 LEU26 GLY27 SER28 MET29 GLY30 GLU31 ARG32 TRP33 ALA34 GLY35 ARG36 GLY37 ALA38 GLU39 GLN40 LEU41 GLY42 LEU43 GLN44 GLY45 SER46 VAL47 ASP48 LYS49 ASP50 VAL51 PHE52 THR53 ARG54 LEU55 LEU56 GLU57 GLY58 ARG59 LEU60 PRO61 ASP62 GLY63 ALA64 ASP65 LEU66 SER67 ARG68 MET69 GLN70 ASP71 GLY72 SER73 ASN74 ARG75 HIS76 ARG77 PRO78 GLY79 TYR80 ASP81 LEU82 THR83 PHE84 SER85 ALA86 PRO87 LYS88 SER89 VAL90 SER91 MET92 MET93 ALA94 MET95 LEU96 GLY97 GLY98 ASP99 LYS100 ARG101 LEU102 ILE103 ASP104 ALA105 HIS106 ASN107 GLN108 ALA109 VAL110 ASP111 PHE112 ALA113 VAL114 ARG115 GLN116 VAL117 GLU118 ALA119 LEU120 ALA121 SER122 THR123 ARG124 VAL125 MET126 THR127 GLN130 SER131 GLU132 THR133 VAL134 LEU135 THR136 GLY137 ASN138 LEU139 VAL140 MET141 ALA142 LEU143 PHE144 ASN145 HIS146 ASP147 THR148 SER149 ARG150 ASP151 GLN152 GLU153 PRO154 GLN155 LEU156 HIS157 THR158 HIS159 ALA160 VAL161 VAL162 ALA163 ASN164 VAL165 THR166 GLN167 HIS168 ASN169 GLY170 GLU171 TRP172 LYS173 THR174 LEU175 SER176 SER177 ASP178 LYS179 VAL180 GLY181 LYS182 THR183 GLY184 PHE185 ILE186 GLU187 ASN188 VAL189 TYR190 ALA191 ASN192 GLN193 ILE194 ALA195 PHE196 GLY197 ARG198 LEU199 TYR200 ARG201 GLU202 LYS203 LEU204 LYS205 GLU206 GLN207 VAL208 GLU209 ALA210 LEU211 GLY212 TYR213 GLU214 THR215 GLU216 VAL217 VAL218 GLY219 LYS220 HIS221 GLY222 MET223 TRP224 GLU225 MET226 PRO227 GLY228 VAL229 PRO230 VAL231 GLU232 ALA233 PHE234 SER235 GLY236 VAL268 ASP269 PRO270 GLU271 ILE272 LYS273 MET274 ALA275 GLU276 TRP277 MET278 GLN279 THR280 LEU281 LYS282 GLU283 THR284 GLY285 PHE286 ASP287 ILE288 ARG289 ALA290 TYR291 ARG292 ASP293 ALA294 ALA295 ASP296 GLN297 ARG298 ALA299 ASP300
Unit 2 MET1001 MET1002 SER1003 ILE1004 ALA1005 GLN1006 VAL1007 ARG1008 SER1009 ALA1010 GLY1011 SER1012 ALA1013 GLY1014 ASN1015 PHE1016 TYR1017 THR1018 ASP1019 LYS1020 ASP1021 ASN1022 TYR1023 TYR1024 VAL1025 LEU1026 GLY1027 SER1028 MET1029 GLY1030 GLU1031 ARG1032 TRP1033 ALA1034 GLY1035 ARG1036 GLY1037 ALA1038 GLU1039 GLN1040 LEU1041 GLY1042 LEU1043 GLN1044 GLY1045 SER1046 VAL1047 ASP1048 LYS1049 ASP1050 VAL1051 PHE1052 THR1053 ARG1054 LEU1055 LEU1056 GLU1057 GLY1058 ARG1059 LEU1060 PRO1061 ASP1062 GLY1063 ALA1064 ASP1065 SER1073 ASN1074 ARG1075 HIS1076 ARG1077 PRO1078 GLY1079 TYR1080 ASP1081 LEU1082 THR1083 PHE1084 SER1085 ALA1086 PRO1087 LYS1088 SER1089 VAL1090 SER1091 MET1092 MET1093 ALA1094 MET1095 LEU1096 GLY1097 GLY1098 ASP1099 LYS1100 ARG1101 LEU1102 ILE1103 ASP1104 ALA1105 HIS1106 ASN1107 GLN1108 ALA1109 VAL1110 ASP1111 PHE1112 ALA1113 VAL1114 ARG1115 GLN1116 VAL1117 GLU1118 ALA1119 LEU1120 ALA1121 SER1122 THR1123 ARG1124 VAL1125 MET1126 THR1127 ASP1128 GLY1129 GLN1130 SER1131 GLU1132 THR1133 VAL1134 LEU1135 THR1136 GLY1137 ASN1138 LEU1139 VAL1140 MET1141 ALA1142 LEU1143 PHE1144 ASN1145 HIS1146 ASP1147 THR1148 SER1149 ARG1150 ASP1151 GLN1152 GLU1153 PRO1154 GLN1155 LEU1156 HIS1157 THR1158 HIS1159 ALA1160 VAL1161 VAL1162 ALA1163 ASN1164 VAL1165 THR1166 GLN1167 HIS1168 ASN1169 GLY1170 GLU1171 TRP1172 LYS1173 THR1174 LEU1175 SER1176 SER1177 ASP1178 LYS1179 VAL1180 GLY1181 LYS1182 THR1183 GLY1184 PHE1185 ILE1186 GLU1187 ASN1188 VAL1189 TYR1190 ALA1191 ASN1192 GLN1193 ILE1194 ALA1195 PHE1196 GLY1197 ARG1198 LEU1199 TYR1200 ARG1201 GLU1202 LYS1203 LEU1204 LYS1205 GLU1206 GLN1207 VAL1208 GLU1209 ALA1210 LEU1211 GLY1212 TYR1213 GLU1214 THR1215 GLU1216 VAL1217 VAL1218 GLY1219 LYS1220 HIS1221 GLY1222 MET1223 TRP1224 GLU1225 MET1226 PRO1227 GLY1228 VAL1229 PRO1230 VAL1231 GLU1232 ALA1233 PHE1234 SER1235 SER1264 LYS1265 GLN1266 HIS1267 VAL1268 ASP1269 PRO1270 GLU1271 ILE1272 LYS1273 MET1274 ALA1275 GLU1276 TRP1277 MET1278 GLN1279 THR1280 LEU1281 LYS1282 GLU1283 THR1284 GLY1285 PHE1286 ASP1287 ILE1288 ARG1289 ALA1290 TYR1291 ARG1292 ASP1293 ALA1294 ALA1295 ASP1296 GLN1297 ARG1298 ALA1299 ASP1300

Ligands
Unit 3 MG5001
Unit 4 TMP2001 MG5002

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany