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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF INFECTIOUS BRONCHITIS VIRUS (IBV) MAIN IN COMPLEX WITH A MICHAEL ACCEPTOR INHIBITOR N3
Keywords CORONAVIRUS; IBV; MAIN PROTEASE; 3C-LIKE PROTEINASE; MICHAEL INHIBITOR, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2Q6F     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INFECTIOUS BRONCHITIS VIRUS (IBV) MAIN PROTEASE  A 294 2259 0
2  Protein   INFECTIOUS BRONCHITIS VIRUS (IBV) MAIN PROTEASE  B 295 2263 0
3  Protein   N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL ((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3- YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE  D 6 20 29
4  Protein   N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL ((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3- YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE  C 6 20 29
5 Water     419 0 419
total       1020 4562 477

Proteins
Unit 1 SER1 GLY2 PHE3 LYS4 LYS5 LEU6 VAL7 SER8 PRO9 SER10 SER11 ALA12 VAL13 GLU14 LYS15 CYS16 ILE17 VAL18 SER19 VAL20 SER21 TYR22 ARG23 GLY24 ASN25 ASN26 LEU27 ASN28 GLY29 LEU30 TRP31 LEU32 GLY33 ASP34 SER35 ILE36 TYR37 CYS38 PRO39 ARG40 HIS41 VAL42 LEU43 GLY44 LYS45 PHE46 SER47 GLY48 ASP49 GLN50 TRP51 GLY52 ASP53 VAL54 LEU55 ASN56 LEU57 ALA58 ASN59 ASN60 HIS61 GLU62 PHE63 GLU64 VAL65 VAL66 THR67 GLN68 ASN69 GLY70 VAL71 THR72 LEU73 ASN74 VAL75 VAL76 SER77 ARG78 ARG79 LEU80 LYS81 GLY82 ALA83 VAL84 LEU85 ILE86 LEU87 GLN88 THR89 ALA90 VAL91 ALA92 ASN93 ALA94 GLU95 THR96 PRO97 LYS98 TYR99 LYS100 PHE101 VAL102 LYS103 ALA104 ASN105 CYS106 GLY107 ASP108 SER109 PHE110 THR111 ILE112 ALA113 CYS114 SER115 TYR116 GLY117 GLY118 THR119 VAL120 ILE121 GLY122 LEU123 TYR124 PRO125 VAL126 THR127 MET128 ARG129 SER130 ASN131 GLY132 THR133 ILE134 ARG135 ALA136 SER137 PHE138 LEU139 ALA140 GLY141 ALA142 CYS143 GLY144 SER145 VAL146 GLY147 PHE148 ASN149 ILE150 GLU151 LYS152 GLY153 VAL154 VAL155 ASN156 PHE157 PHE158 TYR159 MET160 HIS161 HIS162 LEU163 GLU164 LEU165 PRO166 ASN167 ALA168 LEU169 HIS170 THR171 GLY172 THR173 ASP174 LEU175 MET176 GLY177 GLU178 PHE179 TYR180 GLY181 GLY182 TYR183 VAL184 ASP185 GLU186 GLU187 VAL188 ALA189 GLN190 ARG191 VAL192 PRO193 PRO194 ASP195 ASN196 LEU197 VAL198 THR199 ASN200 ASN201 ILE202 VAL203 ALA204 TRP205 LEU206 TYR207 ALA208 ALA209 ILE210 ILE211 SER212 VAL213 PRO221 LYS222 TRP223 LEU224 GLU225 SER226 THR227 THR228 VAL229 SER230 ILE231 GLU232 ASP233 TYR234 ASN235 ARG236 TRP237 ALA238 SER239 ASP240 ASN241 GLY242 PHE243 THR244 PRO245 PHE246 SER247 THR248 SER249 THR250 ALA251 ILE252 THR253 LYS254 LEU255 SER256 ALA257 ILE258 THR259 GLY260 VAL261 ASP262 VAL263 CYS264 LYS265 LEU266 LEU267 ARG268 THR269 ILE270 MET271 VAL272 LYS273 SER274 ALA275 GLN276 TRP277 GLY278 SER279 ASP280 PRO281 ILE282 LEU283 GLY284 GLN285 TYR286 ASN287 PHE288 GLU289 ASP290 GLU291 LEU292 THR293 PRO294 GLU295 SER296 VAL297 PHE298 ASN299 GLN300 VAL301
Unit 2 SER1 GLY2 PHE3 LYS4 LYS5 LEU6 VAL7 SER8 PRO9 SER10 SER11 ALA12 VAL13 GLU14 LYS15 CYS16 ILE17 VAL18 SER19 VAL20 SER21 TYR22 ARG23 GLY24 ASN25 ASN26 LEU27 ASN28 GLY29 LEU30 TRP31 LEU32 GLY33 ASP34 SER35 ILE36 TYR37 CYS38 PRO39 ARG40 HIS41 VAL42 LEU43 GLY44 LYS45 PHE46 SER47 GLY48 ASP49 GLN50 TRP51 GLY52 ASP53 VAL54 LEU55 ASN56 LEU57 ALA58 ASN59 ASN60 HIS61 GLU62 PHE63 GLU64 VAL65 VAL66 THR67 GLN68 ASN69 GLY70 VAL71 THR72 LEU73 ASN74 VAL75 VAL76 SER77 ARG78 ARG79 LEU80 LYS81 GLY82 ALA83 VAL84 LEU85 ILE86 LEU87 GLN88 THR89 ALA90 VAL91 ALA92 ASN93 ALA94 GLU95 THR96 PRO97 LYS98 TYR99 LYS100 PHE101 VAL102 LYS103 ALA104 ASN105 CYS106 GLY107 ASP108 SER109 PHE110 THR111 ILE112 ALA113 CYS114 SER115 TYR116 GLY117 GLY118 THR119 VAL120 ILE121 GLY122 LEU123 TYR124 PRO125 VAL126 THR127 MET128 ARG129 SER130 ASN131 GLY132 THR133 ILE134 ARG135 ALA136 SER137 PHE138 LEU139 ALA140 GLY141 ALA142 CYS143 GLY144 SER145 VAL146 GLY147 PHE148 ASN149 ILE150 GLU151 LYS152 GLY153 VAL154 VAL155 ASN156 PHE157 PHE158 TYR159 MET160 HIS161 HIS162 LEU163 GLU164 LEU165 PRO166 ASN167 ALA168 LEU169 HIS170 THR171 GLY172 THR173 ASP174 LEU175 MET176 GLY177 GLU178 PHE179 TYR180 GLY181 GLY182 TYR183 VAL184 ASP185 GLU186 GLU187 VAL188 ALA189 GLN190 ARG191 VAL192 PRO193 PRO194 ASP195 ASN196 LEU197 VAL198 THR199 ASN200 ASN201 ILE202 VAL203 ALA204 TRP205 LEU206 TYR207 ALA208 ALA209 ILE210 ILE211 SER212 VAL213 PRO221 LYS222 TRP223 LEU224 GLU225 SER226 THR227 THR228 VAL229 SER230 ILE231 GLU232 ASP233 TYR234 ASN235 ARG236 TRP237 ALA238 SER239 ASP240 ASN241 GLY242 PHE243 THR244 PRO245 PHE246 SER247 THR248 SER249 THR250 ALA251 ILE252 THR253 LYS254 LEU255 SER256 ALA257 ILE258 THR259 GLY260 VAL261 ASP262 VAL263 CYS264 LYS265 LEU266 LEU267 ARG268 THR269 ILE270 MET271 VAL272 LYS273 SER274 ALA275 GLN276 TRP277 GLY278 SER279 ASP280 PRO281 ILE282 LEU283 GLY284 GLN285 TYR286 ASN287 PHE288 GLU289 ASP290 GLU291 LEU292 THR293 PRO294 GLU295 SER296 VAL297 PHE298 ASN299 GLN300 VAL301 GLY302
Unit 3 02J1 ALA2 VAL3 LEU4 PJE5 0106
Unit 4 02J1 ALA2 VAL3 LEU4 PJE5 0106

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany