2PYE - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURES OF HIGH AFFINITY HUMAN T-CELL RECEPTORS B PMHC REVEALNATIVE DIAGONAL BINDING GEOMETRY TCR CLONE C5C1 WITH MHC
• Keywords: T-CELL RECEPTOR, CDR3, PHAGE DISPLAY, MUTANT, HIGH AFFINITY, 1, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2PYE	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	276	2253	0
2	Protein	BETA-2-MICROGLOBULIN	B	100	834	0
3	Protein	CANCER/TESTIS ANTIGEN 1B	C	9	75	0
4	Protein	T-CELL RECEPTOR, ALPHA CHAIN	D	195	1494	0
5	Protein	T-CELL RECEPTOR, BETA CHAIN	E	242	1910	0
6	Ligand		A	8	0	69
7	Ligand	BETA-2-MICROGLOBULIN	B	4	0	23
8	Ligand	T-CELL RECEPTOR, ALPHA CHAIN	D	4	0	21
9	Ligand	T-CELL RECEPTOR, BETA CHAIN	E	8	0	49
10	Water			394	0	394
total				1240	6566	556

Proteins

Unit 1	GLY 1 SER 2 HIS 3 SER 4 MET 5 ARG 6 TYR 7 PHE 8 PHE 9 THR 10 SER 11 VAL 12 SER 13 ARG 14 PRO 15 GLY 16 ARG 17 GLY 18 GLU 19 PRO 20 ARG 21 PHE 22 ILE 23 ALA 24 VAL 25 GLY 26 TYR 27 VAL 28 ASP 29 ASP 30 THR 31 GLN 32 PHE 33 VAL 34 ARG 35 PHE 36 ASP 37 SER 38 ASP 39 ALA 40 ALA 41 SER 42 GLN 43 ARG 44 MET 45 GLU 46 PRO 47 ARG 48 ALA 49 PRO 50 TRP 51 ILE 52 GLU 53 GLN 54 GLU 55 GLY 56 PRO 57 GLU 58 TYR 59 TRP 60 ASP 61 GLY 62 GLU 63 THR 64 ARG 65 LYS 66 VAL 67 LYS 68 ALA 69 HIS 70 SER 71 GLN 72 THR 73 HIS 74 ARG 75 VAL 76 ASP 77 LEU 78 GLY 79 THR 80 LEU 81 ARG 82 GLY 83 TYR 84 TYR 85 ASN 86 GLN 87 SER 88 GLU 89 ALA 90 GLY 91 SER 92 HIS 93 THR 94 VAL 95 GLN 96 ARG 97 MET 98 TYR 99 GLY 100 CYS 101 ASP 102 VAL 103 GLY 104 SER 105 ASP 106 TRP 107 ARG 108 PHE 109 LEU 110 ARG 111 GLY 112 TYR 113 HIS 114 GLN 115 TYR 116 ALA 117 TYR 118 ASP 119 GLY 120 LYS 121 ASP 122 TYR 123 ILE 124 ALA 125 LEU 126 LYS 127 GLU 128 ASP 129 LEU 130 ARG 131 SER 132 TRP 133 THR 134 ALA 135 ALA 136 ASP 137 MET 138 ALA 139 ALA 140 GLN 141 THR 142 THR 143 LYS 144 HIS 145 LYS 146 TRP 147 GLU 148 ALA 149 ALA 150 HIS 151 VAL 152 ALA 153 GLU 154 GLN 155 LEU 156 ARG 157 ALA 158 TYR 159 LEU 160 GLU 161 GLY 162 THR 163 CYS 164 VAL 165 GLU 166 TRP 167 LEU 168 ARG 169 ARG 170 TYR 171 LEU 172 GLU 173 ASN 174 GLY 175 LYS 176 GLU 177 THR 178 LEU 179 GLN 180 ARG 181 THR 182 ASP 183 ALA 184 PRO 185 LYS 186 THR 187 HIS 188 MET 189 THR 190 HIS 191 HIS 192 ALA 193 VAL 194 SER 195 ASP 196 HIS 197 GLU 198 ALA 199 THR 200 LEU 201 ARG 202 CYS 203 TRP 204 ALA 205 LEU 206 SER 207 PHE 208 TYR 209 PRO 210 ALA 211 GLU 212 ILE 213 THR 214 LEU 215 THR 216 TRP 217 GLN 218 ARG 219 ASP 220 GLY 221 GLU 222 ASP 223 GLN 224 THR 225 GLN 226 ASP 227 THR 228 GLU 229 LEU 230 VAL 231 GLU 232 THR 233 ARG 234 PRO 235 ALA 236 GLY 237 ASP 238 GLY 239 THR 240 PHE 241 GLN 242 LYS 243 TRP 244 ALA 245 ALA 246 VAL 247 VAL 248 VAL 249 PRO 250 SER 251 GLY 252 GLN 253 GLU 254 GLN 255 ARG 256 TYR 257 THR 258 CYS 259 HIS 260 VAL 261 GLN 262 HIS 263 GLU 264 GLY 265 LEU 266 PRO 267 LYS 268 PRO 269 LEU 270 THR 271 LEU 272 ARG 273 TRP 274 GLU 275 PRO 276
Unit 2	MET 0 ILE 1 GLN 2 ARG 3 THR 4 PRO 5 LYS 6 ILE 7 GLN 8 VAL 9 TYR 10 SER 11 ARG 12 HIS 13 PRO 14 ALA 15 GLU 16 ASN 17 GLY 18 LYS 19 SER 20 ASN 21 PHE 22 LEU 23 ASN 24 CYS 25 TYR 26 VAL 27 SER 28 GLY 29 PHE 30 HIS 31 PRO 32 SER 33 ASP 34 ILE 35 GLU 36 VAL 37 ASP 38 LEU 39 LEU 40 LYS 41 ASN 42 GLY 43 GLU 44 ARG 45 ILE 46 GLU 47 LYS 48 VAL 49 GLU 50 HIS 51 SER 52 ASP 53 LEU 54 SER 55 PHE 56 SER 57 LYS 58 ASP 59 TRP 60 SER 61 PHE 62 TYR 63 LEU 64 LEU 65 TYR 66 TYR 67 THR 68 GLU 69 PHE 70 THR 71 PRO 72 THR 73 GLU 74 LYS 75 ASP 76 GLU 77 TYR 78 ALA 79 CYS 80 ARG 81 VAL 82 ASN 83 HIS 84 VAL 85 THR 86 LEU 87 SER 88 GLN 89 PRO 90 CYS 91 ILE 92 VAL 93 LYS 94 TRP 95 ASP 96 ARG 97 ASP 98 MET 99
Unit 3	SER 1 LEU 2 LEU 3 MET 4 TRP 5 ILE 6 THR 7 GLN 8 CYS 9
Unit 4	MET 0 LYS 1 GLN 2 GLU 3 VAL 4 THR 5 GLN 6 ILE 7 PRO 8 ALA 9 ALA 10 LEU 11 SER 12 VAL 13 PRO 14 GLU 15 GLY 16 GLU 17 ASN 18 LEU 19 VAL 20 LEU 21 ASN 22 CYS 23 SER 24 PHE 25 THR 26 ASP 27 SER 28 ALA 29 ILE 30 TYR 31 ASN 32 LEU 33 GLN 34 TRP 35 PHE 36 ARG 37 GLN 38 ASP 39 PRO 40 GLY 41 LYS 42 GLY 43 LEU 44 THR 45 SER 46 LEU 47 LEU 48 LEU 49 ILE 50 GLN 51 SER 52 SER 53 GLN 54 ARG 55 GLU 56 GLN 57 THR 58 SER 59 GLY 60 ARG 61 LEU 62 ASN 63 ALA 64 SER 65 LEU 66 ASP 67 LYS 68 SER 69 SER 70 GLY 71 SER 72 SER 73 THR 74 LEU 75 TYR 76 ILE 77 ALA 78 ALA 79 SER 80 GLN 81 PRO 82 GLY 83 ASP 84 SER 85 ALA 86 THR 87 TYR 88 LEU 89 CYS 90 ALA 91 VAL 92 ARG 93 PRO 94 LEU 95 LEU 96 ASP 97 GLY 98 THR 99 TYR 100 ILE 101 PRO 102 THR 103 PHE 104 GLY 105 ARG 106 GLY 107 THR 108 SER 109 LEU 110 ILE 111 VAL 112 HIS 113 PRO 114 TYR 115 ILE 116 GLN 117 ASN 118 PRO 119 ASP 120 PRO 121 ALA 122 VAL 123 TYR 124 GLN 125 LEU 126 ARG 127 ASP 128 SER 129 LYS 130 SER 131 SER 132 ASP 133 LYS 134 SER 135 VAL 136 CYS 137 LEU 138 PHE 139 THR 140 ASP 141 PHE 142 ASP 143 SER 144 GLN 145 THR 146 ASN 147 VAL 148 SER 149 GLN 150 SER 151 LYS 152 ASP 153 SER 154 ASP 155 VAL 156 TYR 157 ILE 158 THR 159 ASP 160 LYS 161 CYS 162 VAL 163 LEU 164 ASP 165 MET 166 ARG 167 SER 168 MET 169 ASP 170 PHE 171 LYS 172 SER 173 ASN 174 SER 175 ALA 176 VAL 177 ALA 178 TRP 179 SER 180 ASN 181 LYS 182 SER 183 ASP 184 PHE 185 ALA 186 CYS 187 ALA 188 ASN 189 ALA 190 PHE 191 ASN 192 ASN 193 SER 194
Unit 5	MET 0 GLY 1 VAL 2 THR 3 GLN 4 THR 5 PRO 6 LYS 7 PHE 8 GLN 9 VAL 10 LEU 11 LYS 12 THR 13 GLY 14 GLN 15 SER 16 MET 17 THR 18 LEU 19 GLN 20 CYS 21 ALA 22 GLN 23 ASP 24 MET 25 ASN 26 HIS 27 GLU 28 TYR 29 MET 30 SER 31 TRP 32 TYR 33 ARG 34 GLN 35 ASP 36 PRO 37 GLY 38 MET 39 GLY 40 LEU 41 ARG 42 LEU 43 ILE 44 HIS 45 TYR 46 SER 47 VAL 48 GLY 49 ALA 50 GLY 51 THR 52 THR 53 ASP 54 GLN 55 GLY 56 GLU 57 VAL 58 PRO 59 ASN 60 GLY 61 TYR 62 ASN 63 VAL 64 SER 65 ARG 66 SER 67 THR 68 ILE 69 GLU 70 ASP 71 PHE 72 PRO 73 LEU 74 ARG 75 LEU 76 LEU 77 SER 78 ALA 79 ALA 80 PRO 81 SER 82 GLN 83 THR 84 SER 85 VAL 86 TYR 87 PHE 88 CYS 89 ALA 90 SER 91 SER 92 TYR 93 LEU 94 GLY 95 ASN 96 THR 97 GLY 98 GLU 99 LEU 100 PHE 101 PHE 102 GLY 103 GLU 104 GLY 105 SER 106 ARG 107 LEU 108 THR 109 VAL 110 LEU 111 GLU 112 ASP 113 LEU 114 LYS 115 ASN 116 VAL 117 PHE 118 PRO 119 PRO 120 GLU 121 VAL 122 ALA 123 VAL 124 PHE 125 GLU 126 PRO 127 SER 128 GLU 129 ALA 130 GLU 131 ILE 132 SER 133 HIS 134 THR 135 GLN 136 LYS 137 ALA 138 THR 139 LEU 140 VAL 141 CYS 142 LEU 143 ALA 144 THR 145 GLY 146 PHE 147 TYR 148 PRO 149 ASP 150 HIS 151 VAL 152 GLU 153 LEU 154 SER 155 TRP 156 TRP 157 VAL 158 ASN 159 GLY 160 LYS 161 GLU 162 VAL 163 HIS 164 SER 165 GLY 166 VAL 167 CYS 168 THR 169 ASP 170 PRO 171 GLN 172 PRO 173 LEU 174 LYS 175 GLU 176 GLN 177 PRO 178 ALA 179 LEU 180 ASN 181 ASP 182 SER 183 ARG 184 TYR 185 ALA 186 LEU 187 SER 188 SER 189 ARG 190 LEU 191 ARG 192 VAL 193 SER 194 ALA 195 THR 196 PHE 197 TRP 198 GLN 199 ASP 200 PRO 201 ARG 202 ASN 203 HIS 204 PHE 205 ARG 206 CYS 207 GLN 208 VAL 209 GLN 210 PHE 211 TYR 212 GLY 213 LEU 214 SER 215 GLU 216 ASN 217 ASP 218 GLU 219 TRP 220 THR 221 GLN 222 ASP 223 ARG 224 ALA 225 LYS 226 PRO 227 VAL 228 THR 229 GLN 230 ILE 231 VAL 232 SER 233 ALA 234 GLU 235 ALA 236 TRP 237 GLY 238 ARG 239 ALA 240 ASP 241

Ligands

Unit 6	SO4 405 SO4 407 PGE 501 PGE 502 7PE 504 GOL 602 GOL 605 GOL 610
Unit 7	SO4 408 GOL 601 GOL 603 GOL 609
Unit 8	SO4 401 SO4 404 SO4 409 GOL 606
Unit 9	SO4 402 SO4 403 SO4 406 PGE 503 GOL 604 GOL 607 GOL 608 GOL 611