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Sequence, Chains, Asymmetric and Biological Units

Title OXIDIZED PENICILLIN V ACYLASE FROM B. SPHAERICUS
Keywords AMIDOHYDROLASE, NTN HYDROLASE, PENICILLIN V ACYLASE, HYDROLA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2PVA     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PENICILLIN V ACYLASE  A 332 2584 9
2  Protein   PENICILLIN V ACYLASE  B 332 2584 9
3  Protein   PENICILLIN V ACYLASE  C 332 2584 9
4  Protein   PENICILLIN V ACYLASE  D 332 2584 9
5  Ligand   PENICILLIN V ACYLASE  A 1 0 8
6  Ligand   PENICILLIN V ACYLASE  B 1 0 8
7  Ligand   PENICILLIN V ACYLASE  C 1 0 8
8  Ligand   PENICILLIN V ACYLASE  D 1 0 8
9 Water     805 0 805
total       2137 10336 873
Proteins
Unit 1 OCS1 SER2 SER3 LEU4 SER5 ILE6 ARG7 THR8 THR9 ASP10 ASP11 LYS12 SER13 LEU14 PHE15 ALA16 ARG17 THR18 MET19 ASP20 PHE21 THR22 MET23 GLU24 PRO25 ASP26 SER27 LYS28 VAL29 ILE30 ILE31 VAL32 PRO33 ARG34 ASN35 TYR36 GLY37 ILE38 ARG39 LEU40 LEU41 GLU42 LYS43 GLU44 ASN45 VAL46 VAL47 ILE48 ASN49 ASN50 SER51 TYR52 ALA53 PHE54 VAL55 GLY56 MET57 GLY58 SER59 THR60 ASP61 ILE62 THR63 SER64 PRO65 VAL66 LEU67 TYR68 ASP69 GLY70 VAL71 ASN72 GLU73 LYS74 GLY75 LEU76 MET77 GLY78 ALA79 MET80 LEU81 TYR82 TYR83 ALA84 THR85 PHE86 ALA87 THR88 TYR89 ALA90 ASP91 GLU92 PRO93 LYS94 LYS95 GLY96 THR97 THR98 GLY99 ILE100 ASN101 PRO102 VAL103 TYR104 VAL105 ILE106 SER107 GLN108 VAL109 LEU110 GLY111 ASN112 CYS113 VAL114 THR115 VAL116 ASP117 ASP118 VAL119 ILE120 GLU121 LYS122 LEU123 THR124 SER125 TYR126 THR127 LEU128 LEU129 ASN130 GLU131 ALA132 ASN133 ILE134 ILE135 LEU136 GLY137 PHE138 ALA139 PRO140 PRO141 LEU142 HIS143 TYR144 THR145 PHE146 THR147 ASP148 ALA149 SER150 GLY151 GLU152 SER153 ILE154 VAL155 ILE156 GLU157 PRO158 ASP159 LYS160 THR161 GLY162 ILE163 THR164 ILE165 HIS166 ARG167 LYS168 THR169 ILE170 GLY171 VAL172 MET173 THR174 ASN175 SER176 PRO177 GLY178 TYR179 GLU180 TRP181 HIS182 GLN183 THR184 ASN185 LEU186 ARG187 ALA188 TYR189 ILE190 GLY191 VAL192 THR193 PRO194 ASN195 PRO196 PRO197 GLN198 ASP199 ILE200 MET201 MET202 GLY203 ASP204 LEU205 ASP206 LEU207 THR208 PRO209 PHE210 GLY211 GLN212 GLY213 ALA214 GLY215 GLY216 LEU217 GLY218 LEU219 PRO220 GLY221 ASP222 PHE223 THR224 PRO225 SER226 ALA227 ARG228 PHE229 LEU230 ARG231 VAL232 ALA233 TYR234 TRP235 LYS236 LYS237 TYR238 THR239 GLU240 LYS241 ALA242 LYS243 ASN244 GLU245 THR246 GLU247 GLY248 VAL249 THR250 ASN251 LEU252 PHE253 HIS254 ILE255 LEU256 SER257 SER258 VAL259 ASN260 ILE261 PRO262 LYS263 GLY264 VAL265 VAL266 LEU267 THR268 ASN269 GLU270 GLY271 LYS272 THR273 ASP274 TYR275 THR276 ILE277 TYR278 THR279 SER280 ALA281 MET282 CYS283 ALA284 GLN285 SER286 LYS287 ASN288 TYR289 TYR290 PHE291 LYS292 LEU293 TYR294 ASP295 ASN296 SER297 ARG298 ILE299 SER300 ALA301 VAL302 SER303 LEU304 MET305 ALA306 GLU307 ASN308 LEU309 ASN310 SER311 GLN312 ASP313 LEU314 ILE315 THR316 PHE317 GLU318 TRP319 ASP320 ARG321 LYS322 GLN323 ASP324 ILE325 LYS326 GLN327 LEU328 ASN329 GLN330 VAL331 ASN332
Unit 2 OCS1 SER2 SER3 LEU4 SER5 ILE6 ARG7 THR8 THR9 ASP10 ASP11 LYS12 SER13 LEU14 PHE15 ALA16 ARG17 THR18 MET19 ASP20 PHE21 THR22 MET23 GLU24 PRO25 ASP26 SER27 LYS28 VAL29 ILE30 ILE31 VAL32 PRO33 ARG34 ASN35 TYR36 GLY37 ILE38 ARG39 LEU40 LEU41 GLU42 LYS43 GLU44 ASN45 VAL46 VAL47 ILE48 ASN49 ASN50 SER51 TYR52 ALA53 PHE54 VAL55 GLY56 MET57 GLY58 SER59 THR60 ASP61 ILE62 THR63 SER64 PRO65 VAL66 LEU67 TYR68 ASP69 GLY70 VAL71 ASN72 GLU73 LYS74 GLY75 LEU76 MET77 GLY78 ALA79 MET80 LEU81 TYR82 TYR83 ALA84 THR85 PHE86 ALA87 THR88 TYR89 ALA90 ASP91 GLU92 PRO93 LYS94 LYS95 GLY96 THR97 THR98 GLY99 ILE100 ASN101 PRO102 VAL103 TYR104 VAL105 ILE106 SER107 GLN108 VAL109 LEU110 GLY111 ASN112 CYS113 VAL114 THR115 VAL116 ASP117 ASP118 VAL119 ILE120 GLU121 LYS122 LEU123 THR124 SER125 TYR126 THR127 LEU128 LEU129 ASN130 GLU131 ALA132 ASN133 ILE134 ILE135 LEU136 GLY137 PHE138 ALA139 PRO140 PRO141 LEU142 HIS143 TYR144 THR145 PHE146 THR147 ASP148 ALA149 SER150 GLY151 GLU152 SER153 ILE154 VAL155 ILE156 GLU157 PRO158 ASP159 LYS160 THR161 GLY162 ILE163 THR164 ILE165 HIS166 ARG167 LYS168 THR169 ILE170 GLY171 VAL172 MET173 THR174 ASN175 SER176 PRO177 GLY178 TYR179 GLU180 TRP181 HIS182 GLN183 THR184 ASN185 LEU186 ARG187 ALA188 TYR189 ILE190 GLY191 VAL192 THR193 PRO194 ASN195 PRO196 PRO197 GLN198 ASP199 ILE200 MET201 MET202 GLY203 ASP204 LEU205 ASP206 LEU207 THR208 PRO209 PHE210 GLY211 GLN212 GLY213 ALA214 GLY215 GLY216 LEU217 GLY218 LEU219 PRO220 GLY221 ASP222 PHE223 THR224 PRO225 SER226 ALA227 ARG228 PHE229 LEU230 ARG231 VAL232 ALA233 TYR234 TRP235 LYS236 LYS237 TYR238 THR239 GLU240 LYS241 ALA242 LYS243 ASN244 GLU245 THR246 GLU247 GLY248 VAL249 THR250 ASN251 LEU252 PHE253 HIS254 ILE255 LEU256 SER257 SER258 VAL259 ASN260 ILE261 PRO262 LYS263 GLY264 VAL265 VAL266 LEU267 THR268 ASN269 GLU270 GLY271 LYS272 THR273 ASP274 TYR275 THR276 ILE277 TYR278 THR279 SER280 ALA281 MET282 CYS283 ALA284 GLN285 SER286 LYS287 ASN288 TYR289 TYR290 PHE291 LYS292 LEU293 TYR294 ASP295 ASN296 SER297 ARG298 ILE299 SER300 ALA301 VAL302 SER303 LEU304 MET305 ALA306 GLU307 ASN308 LEU309 ASN310 SER311 GLN312 ASP313 LEU314 ILE315 THR316 PHE317 GLU318 TRP319 ASP320 ARG321 LYS322 GLN323 ASP324 ILE325 LYS326 GLN327 LEU328 ASN329 GLN330 VAL331 ASN332
Unit 3 OCS1 SER2 SER3 LEU4 SER5 ILE6 ARG7 THR8 THR9 ASP10 ASP11 LYS12 SER13 LEU14 PHE15 ALA16 ARG17 THR18 MET19 ASP20 PHE21 THR22 MET23 GLU24 PRO25 ASP26 SER27 LYS28 VAL29 ILE30 ILE31 VAL32 PRO33 ARG34 ASN35 TYR36 GLY37 ILE38 ARG39 LEU40 LEU41 GLU42 LYS43 GLU44 ASN45 VAL46 VAL47 ILE48 ASN49 ASN50 SER51 TYR52 ALA53 PHE54 VAL55 GLY56 MET57 GLY58 SER59 THR60 ASP61 ILE62 THR63 SER64 PRO65 VAL66 LEU67 TYR68 ASP69 GLY70 VAL71 ASN72 GLU73 LYS74 GLY75 LEU76 MET77 GLY78 ALA79 MET80 LEU81 TYR82 TYR83 ALA84 THR85 PHE86 ALA87 THR88 TYR89 ALA90 ASP91 GLU92 PRO93 LYS94 LYS95 GLY96 THR97 THR98 GLY99 ILE100 ASN101 PRO102 VAL103 TYR104 VAL105 ILE106 SER107 GLN108 VAL109 LEU110 GLY111 ASN112 CYS113 VAL114 THR115 VAL116 ASP117 ASP118 VAL119 ILE120 GLU121 LYS122 LEU123 THR124 SER125 TYR126 THR127 LEU128 LEU129 ASN130 GLU131 ALA132 ASN133 ILE134 ILE135 LEU136 GLY137 PHE138 ALA139 PRO140 PRO141 LEU142 HIS143 TYR144 THR145 PHE146 THR147 ASP148 ALA149 SER150 GLY151 GLU152 SER153 ILE154 VAL155 ILE156 GLU157 PRO158 ASP159 LYS160 THR161 GLY162 ILE163 THR164 ILE165 HIS166 ARG167 LYS168 THR169 ILE170 GLY171 VAL172 MET173 THR174 ASN175 SER176 PRO177 GLY178 TYR179 GLU180 TRP181 HIS182 GLN183 THR184 ASN185 LEU186 ARG187 ALA188 TYR189 ILE190 GLY191 VAL192 THR193 PRO194 ASN195 PRO196 PRO197 GLN198 ASP199 ILE200 MET201 MET202 GLY203 ASP204 LEU205 ASP206 LEU207 THR208 PRO209 PHE210 GLY211 GLN212 GLY213 ALA214 GLY215 GLY216 LEU217 GLY218 LEU219 PRO220 GLY221 ASP222 PHE223 THR224 PRO225 SER226 ALA227 ARG228 PHE229 LEU230 ARG231 VAL232 ALA233 TYR234 TRP235 LYS236 LYS237 TYR238 THR239 GLU240 LYS241 ALA242 LYS243 ASN244 GLU245 THR246 GLU247 GLY248 VAL249 THR250 ASN251 LEU252 PHE253 HIS254 ILE255 LEU256 SER257 SER258 VAL259 ASN260 ILE261 PRO262 LYS263 GLY264 VAL265 VAL266 LEU267 THR268 ASN269 GLU270 GLY271 LYS272 THR273 ASP274 TYR275 THR276 ILE277 TYR278 THR279 SER280 ALA281 MET282 CYS283 ALA284 GLN285 SER286 LYS287 ASN288 TYR289 TYR290 PHE291 LYS292 LEU293 TYR294 ASP295 ASN296 SER297 ARG298 ILE299 SER300 ALA301 VAL302 SER303 LEU304 MET305 ALA306 GLU307 ASN308 LEU309 ASN310 SER311 GLN312 ASP313 LEU314 ILE315 THR316 PHE317 GLU318 TRP319 ASP320 ARG321 LYS322 GLN323 ASP324 ILE325 LYS326 GLN327 LEU328 ASN329 GLN330 VAL331 ASN332
Unit 4 OCS1 SER2 SER3 LEU4 SER5 ILE6 ARG7 THR8 THR9 ASP10 ASP11 LYS12 SER13 LEU14 PHE15 ALA16 ARG17 THR18 MET19 ASP20 PHE21 THR22 MET23 GLU24 PRO25 ASP26 SER27 LYS28 VAL29 ILE30 ILE31 VAL32 PRO33 ARG34 ASN35 TYR36 GLY37 ILE38 ARG39 LEU40 LEU41 GLU42 LYS43 GLU44 ASN45 VAL46 VAL47 ILE48 ASN49 ASN50 SER51 TYR52 ALA53 PHE54 VAL55 GLY56 MET57 GLY58 SER59 THR60 ASP61 ILE62 THR63 SER64 PRO65 VAL66 LEU67 TYR68 ASP69 GLY70 VAL71 ASN72 GLU73 LYS74 GLY75 LEU76 MET77 GLY78 ALA79 MET80 LEU81 TYR82 TYR83 ALA84 THR85 PHE86 ALA87 THR88 TYR89 ALA90 ASP91 GLU92 PRO93 LYS94 LYS95 GLY96 THR97 THR98 GLY99 ILE100 ASN101 PRO102 VAL103 TYR104 VAL105 ILE106 SER107 GLN108 VAL109 LEU110 GLY111 ASN112 CYS113 VAL114 THR115 VAL116 ASP117 ASP118 VAL119 ILE120 GLU121 LYS122 LEU123 THR124 SER125 TYR126 THR127 LEU128 LEU129 ASN130 GLU131 ALA132 ASN133 ILE134 ILE135 LEU136 GLY137 PHE138 ALA139 PRO140 PRO141 LEU142 HIS143 TYR144 THR145 PHE146 THR147 ASP148 ALA149 SER150 GLY151 GLU152 SER153 ILE154 VAL155 ILE156 GLU157 PRO158 ASP159 LYS160 THR161 GLY162 ILE163 THR164 ILE165 HIS166 ARG167 LYS168 THR169 ILE170 GLY171 VAL172 MET173 THR174 ASN175 SER176 PRO177 GLY178 TYR179 GLU180 TRP181 HIS182 GLN183 THR184 ASN185 LEU186 ARG187 ALA188 TYR189 ILE190 GLY191 VAL192 THR193 PRO194 ASN195 PRO196 PRO197 GLN198 ASP199 ILE200 MET201 MET202 GLY203 ASP204 LEU205 ASP206 LEU207 THR208 PRO209 PHE210 GLY211 GLN212 GLY213 ALA214 GLY215 GLY216 LEU217 GLY218 LEU219 PRO220 GLY221 ASP222 PHE223 THR224 PRO225 SER226 ALA227 ARG228 PHE229 LEU230 ARG231 VAL232 ALA233 TYR234 TRP235 LYS236 LYS237 TYR238 THR239 GLU240 LYS241 ALA242 LYS243 ASN244 GLU245 THR246 GLU247 GLY248 VAL249 THR250 ASN251 LEU252 PHE253 HIS254 ILE255 LEU256 SER257 SER258 VAL259 ASN260 ILE261 PRO262 LYS263 GLY264 VAL265 VAL266 LEU267 THR268 ASN269 GLU270 GLY271 LYS272 THR273 ASP274 TYR275 THR276 ILE277 TYR278 THR279 SER280 ALA281 MET282 CYS283 ALA284 GLN285 SER286 LYS287 ASN288 TYR289 TYR290 PHE291 LYS292 LEU293 TYR294 ASP295 ASN296 SER297 ARG298 ILE299 SER300 ALA301 VAL302 SER303 LEU304 MET305 ALA306 GLU307 ASN308 LEU309 ASN310 SER311 GLN312 ASP313 LEU314 ILE315 THR316 PHE317 GLU318 TRP319 ASP320 ARG321 LYS322 GLN323 ASP324 ILE325 LYS326 GLN327 LEU328 ASN329 GLN330 VAL331 ASN332
Ligands
Unit 5 DTD1001
Unit 6 DTD1002
Unit 7 DTD1003
Unit 8 DTD1004
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany