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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN INTRINSIC FACTOR- COBALAMIN COMPL A RESOLUTION
Keywords COBALAMIN TRANSPORT PROTEIN ALPHA6-ALPHA6 MOTIF TWO DOMAIN P TRANSPORT PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2PMV     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GASTRIC INTRINSIC FACTOR  A 378 2871 0
2  Protein   GASTRIC INTRINSIC FACTOR  B 267 2009 0
3  Protein   GASTRIC INTRINSIC FACTOR  C 378 2871 0
4  Protein   GASTRIC INTRINSIC FACTOR  D 267 2009 0
5  Ligand    E 2 0 28
6  Ligand    F 2 0 28
7  Ligand   GASTRIC INTRINSIC FACTOR  A 1 0 91
8  Ligand   GASTRIC INTRINSIC FACTOR  C 1 0 91
9 Water     459 0 459
total       1755 9760 697
Proteins
Unit 1 SER7 CYS8 SER9 VAL10 PRO11 SER12 ALA13 GLN14 GLU15 PRO16 LEU17 VAL18 ASN19 GLY20 ILE21 GLN22 VAL23 LEU24 MET25 GLU26 ASN27 SER28 VAL29 THR30 SER31 SER32 ALA33 TYR34 PRO35 ASN36 PRO37 SER38 ILE39 LEU40 ILE41 ALA42 MET43 ASN44 LEU45 ALA46 GLY47 ALA48 TYR49 ASN50 LEU51 LYS52 ALA53 GLN54 LYS55 LEU56 LEU57 THR58 TYR59 GLN60 LEU61 MET62 SER63 SER64 ASP65 ASN66 ASN67 ASP68 LEU69 THR70 ILE71 GLY72 HIS73 LEU74 GLY75 LEU76 THR77 ILE78 MET79 ALA80 LEU81 THR82 SER83 SER84 CYS85 ARG86 ASP87 PRO88 GLY89 ASP90 LYS91 VAL92 SER93 ILE94 LEU95 GLN96 ARG97 GLN98 MET99 GLU100 ASN101 TRP102 ALA103 PRO104 SER105 SER106 PRO107 ASN108 ALA109 GLU110 ALA111 SER112 ALA113 PHE114 TYR115 GLY116 PRO117 SER118 LEU119 ALA120 ILE121 LEU122 ALA123 LEU124 CYS125 GLN126 LYS127 ASN128 SER129 GLU130 ALA131 THR132 LEU133 PRO134 ILE135 ALA136 VAL137 ARG138 PHE139 ALA140 LYS141 THR142 LEU143 LEU144 ALA145 ASN146 SER147 SER148 PRO149 PHE150 ASN151 VAL152 ASP153 THR154 GLY155 ALA156 MET157 ALA158 THR159 LEU160 ALA161 LEU162 THR163 CYS164 MET165 TYR166 ASN167 LYS168 ILE169 PRO170 VAL171 GLY172 SER173 GLU174 GLU175 GLY176 TYR177 ARG178 SER179 LEU180 PHE181 GLY182 GLN183 VAL184 LEU185 LYS186 ASP187 ILE188 VAL189 GLU190 LYS191 ILE192 SER193 MET194 LYS195 ILE196 LYS197 ASP198 ASN199 GLY200 ILE201 ILE202 GLY203 ASP204 ILE205 TYR206 SER207 THR208 GLY209 LEU210 ALA211 MET212 GLN213 ALA214 LEU215 SER216 VAL217 THR218 PRO219 GLU220 PRO221 SER222 LYS223 LYS224 GLU225 TRP226 ASN227 CYS228 LYS229 LYS230 THR231 THR232 ASP233 MET234 ILE235 LEU236 ASN237 GLU238 ILE239 LYS240 GLN241 GLY242 LYS243 PHE244 HIS245 ASN246 PRO247 MET248 SER249 ILE250 ALA251 GLN252 ILE253 LEU254 PRO255 SER256 LEU257 LYS258 GLY259 LYS260 THR261 TYR262 LEU263 ASP264 VAL265 PRO266 GLN267 VAL268 THR269 CYS270 SER271 PRO272 ASP273 THR289 SER290 ALA291 SER292 ASN293 ILE294 THR295 VAL296 ILE297 TYR298 THR299 ILE300 ASN301 ASN302 GLN303 LEU304 ARG305 GLY306 VAL307 GLU308 LEU309 LEU310 PHE311 ASN312 GLU313 THR314 ILE315 ASN316 VAL317 SER318 VAL319 LYS320 SER321 GLY322 SER323 VAL324 LEU325 LEU326 VAL327 VAL328 LEU329 GLU330 GLU331 ALA332 GLN333 ARG334 LYS335 ASN336 PRO337 MET338 PHE339 LYS340 PHE341 GLU342 THR343 THR344 MET345 THR346 SER347 TRP348 GLY349 LEU350 VAL351 VAL352 SER353 SER354 ILE355 ASN356 ASN357 ILE358 ALA359 GLU360 ASN361 VAL362 ASN363 HIS364 LYS365 THR366 TYR367 TRP368 GLN369 PHE370 LEU371 SER372 GLY373 VAL374 THR375 PRO376 LEU377 ASN378 GLU379 GLY380 VAL381 ALA382 ASP383 TYR384 ILE385 PRO386 PHE387 ASN388 HIS389 GLU390 HIS391 ILE392 THR393 ALA394 ASN395 PHE396 THR397 GLN398 TYR399
Unit 2 SER7 CYS8 SER9 VAL10 PRO11 SER12 ALA13 GLN14 GLU15 PRO16 LEU17 VAL18 ASN19 GLY20 ILE21 GLN22 VAL23 LEU24 MET25 GLU26 ASN27 SER28 VAL29 THR30 SER31 SER32 ALA33 TYR34 PRO35 ASN36 PRO37 SER38 ILE39 LEU40 ILE41 ALA42 MET43 ASN44 LEU45 ALA46 GLY47 ALA48 TYR49 ASN50 LEU51 LYS52 ALA53 GLN54 LYS55 LEU56 LEU57 THR58 TYR59 GLN60 LEU61 MET62 SER63 SER64 ASP65 ASN66 ASN67 ASP68 LEU69 THR70 ILE71 GLY72 HIS73 LEU74 GLY75 LEU76 THR77 ILE78 MET79 ALA80 LEU81 THR82 SER83 SER84 CYS85 ARG86 ASP87 PRO88 GLY89 ASP90 LYS91 VAL92 SER93 ILE94 LEU95 GLN96 ARG97 GLN98 MET99 GLU100 ASN101 TRP102 ALA103 PRO104 SER105 SER106 PRO107 ASN108 ALA109 GLU110 ALA111 SER112 ALA113 PHE114 TYR115 GLY116 PRO117 SER118 LEU119 ALA120 ILE121 LEU122 ALA123 LEU124 CYS125 GLN126 LYS127 ASN128 SER129 GLU130 ALA131 THR132 LEU133 PRO134 ILE135 ALA136 VAL137 ARG138 PHE139 ALA140 LYS141 THR142 LEU143 LEU144 ALA145 ASN146 SER147 SER148 PRO149 PHE150 ASN151 VAL152 ASP153 THR154 GLY155 ALA156 MET157 ALA158 THR159 LEU160 ALA161 LEU162 THR163 CYS164 MET165 TYR166 ASN167 LYS168 ILE169 PRO170 VAL171 GLY172 SER173 GLU174 GLU175 GLY176 TYR177 ARG178 SER179 LEU180 PHE181 GLY182 GLN183 VAL184 LEU185 LYS186 ASP187 ILE188 VAL189 GLU190 LYS191 ILE192 SER193 MET194 LYS195 ILE196 LYS197 ASP198 ASN199 GLY200 ILE201 ILE202 GLY203 ASP204 ILE205 TYR206 SER207 THR208 GLY209 LEU210 ALA211 MET212 GLN213 ALA214 LEU215 SER216 VAL217 THR218 PRO219 GLU220 PRO221 SER222 LYS223 LYS224 GLU225 TRP226 ASN227 CYS228 LYS229 LYS230 THR231 THR232 ASP233 MET234 ILE235 LEU236 ASN237 GLU238 ILE239 LYS240 GLN241 GLY242 LYS243 PHE244 HIS245 ASN246 PRO247 MET248 SER249 ILE250 ALA251 GLN252 ILE253 LEU254 PRO255 SER256 LEU257 LYS258 GLY259 LYS260 THR261 TYR262 LEU263 ASP264 VAL265 PRO266 GLN267 VAL268 THR269 CYS270 SER271 PRO272 ASP273
Unit 3 SER7 CYS8 SER9 VAL10 PRO11 SER12 ALA13 GLN14 GLU15 PRO16 LEU17 VAL18 ASN19 GLY20 ILE21 GLN22 VAL23 LEU24 MET25 GLU26 ASN27 SER28 VAL29 THR30 SER31 SER32 ALA33 TYR34 PRO35 ASN36 PRO37 SER38 ILE39 LEU40 ILE41 ALA42 MET43 ASN44 LEU45 ALA46 GLY47 ALA48 TYR49 ASN50 LEU51 LYS52 ALA53 GLN54 LYS55 LEU56 LEU57 THR58 TYR59 GLN60 LEU61 MET62 SER63 SER64 ASP65 ASN66 ASN67 ASP68 LEU69 THR70 ILE71 GLY72 HIS73 LEU74 GLY75 LEU76 THR77 ILE78 MET79 ALA80 LEU81 THR82 SER83 SER84 CYS85 ARG86 ASP87 PRO88 GLY89 ASP90 LYS91 VAL92 SER93 ILE94 LEU95 GLN96 ARG97 GLN98 MET99 GLU100 ASN101 TRP102 ALA103 PRO104 SER105 SER106 PRO107 ASN108 ALA109 GLU110 ALA111 SER112 ALA113 PHE114 TYR115 GLY116 PRO117 SER118 LEU119 ALA120 ILE121 LEU122 ALA123 LEU124 CYS125 GLN126 LYS127 ASN128 SER129 GLU130 ALA131 THR132 LEU133 PRO134 ILE135 ALA136 VAL137 ARG138 PHE139 ALA140 LYS141 THR142 LEU143 LEU144 ALA145 ASN146 SER147 SER148 PRO149 PHE150 ASN151 VAL152 ASP153 THR154 GLY155 ALA156 MET157 ALA158 THR159 LEU160 ALA161 LEU162 THR163 CYS164 MET165 TYR166 ASN167 LYS168 ILE169 PRO170 VAL171 GLY172 SER173 GLU174 GLU175 GLY176 TYR177 ARG178 SER179 LEU180 PHE181 GLY182 GLN183 VAL184 LEU185 LYS186 ASP187 ILE188 VAL189 GLU190 LYS191 ILE192 SER193 MET194 LYS195 ILE196 LYS197 ASP198 ASN199 GLY200 ILE201 ILE202 GLY203 ASP204 ILE205 TYR206 SER207 THR208 GLY209 LEU210 ALA211 MET212 GLN213 ALA214 LEU215 SER216 VAL217 THR218 PRO219 GLU220 PRO221 SER222 LYS223 LYS224 GLU225 TRP226 ASN227 CYS228 LYS229 LYS230 THR231 THR232 ASP233 MET234 ILE235 LEU236 ASN237 GLU238 ILE239 LYS240 GLN241 GLY242 LYS243 PHE244 HIS245 ASN246 PRO247 MET248 SER249 ILE250 ALA251 GLN252 ILE253 LEU254 PRO255 SER256 LEU257 LYS258 GLY259 LYS260 THR261 TYR262 LEU263 ASP264 VAL265 PRO266 GLN267 VAL268 THR269 CYS270 SER271 PRO272 ASP273 THR289 SER290 ALA291 SER292 ASN293 ILE294 THR295 VAL296 ILE297 TYR298 THR299 ILE300 ASN301 ASN302 GLN303 LEU304 ARG305 GLY306 VAL307 GLU308 LEU309 LEU310 PHE311 ASN312 GLU313 THR314 ILE315 ASN316 VAL317 SER318 VAL319 LYS320 SER321 GLY322 SER323 VAL324 LEU325 LEU326 VAL327 VAL328 LEU329 GLU330 GLU331 ALA332 GLN333 ARG334 LYS335 ASN336 PRO337 MET338 PHE339 LYS340 PHE341 GLU342 THR343 THR344 MET345 THR346 SER347 TRP348 GLY349 LEU350 VAL351 VAL352 SER353 SER354 ILE355 ASN356 ASN357 ILE358 ALA359 GLU360 ASN361 VAL362 ASN363 HIS364 LYS365 THR366 TYR367 TRP368 GLN369 PHE370 LEU371 SER372 GLY373 VAL374 THR375 PRO376 LEU377 ASN378 GLU379 GLY380 VAL381 ALA382 ASP383 TYR384 ILE385 PRO386 PHE387 ASN388 HIS389 GLU390 HIS391 ILE392 THR393 ALA394 ASN395 PHE396 THR397 GLN398 TYR399
Unit 4 SER7 CYS8 SER9 VAL10 PRO11 SER12 ALA13 GLN14 GLU15 PRO16 LEU17 VAL18 ASN19 GLY20 ILE21 GLN22 VAL23 LEU24 MET25 GLU26 ASN27 SER28 VAL29 THR30 SER31 SER32 ALA33 TYR34 PRO35 ASN36 PRO37 SER38 ILE39 LEU40 ILE41 ALA42 MET43 ASN44 LEU45 ALA46 GLY47 ALA48 TYR49 ASN50 LEU51 LYS52 ALA53 GLN54 LYS55 LEU56 LEU57 THR58 TYR59 GLN60 LEU61 MET62 SER63 SER64 ASP65 ASN66 ASN67 ASP68 LEU69 THR70 ILE71 GLY72 HIS73 LEU74 GLY75 LEU76 THR77 ILE78 MET79 ALA80 LEU81 THR82 SER83 SER84 CYS85 ARG86 ASP87 PRO88 GLY89 ASP90 LYS91 VAL92 SER93 ILE94 LEU95 GLN96 ARG97 GLN98 MET99 GLU100 ASN101 TRP102 ALA103 PRO104 SER105 SER106 PRO107 ASN108 ALA109 GLU110 ALA111 SER112 ALA113 PHE114 TYR115 GLY116 PRO117 SER118 LEU119 ALA120 ILE121 LEU122 ALA123 LEU124 CYS125 GLN126 LYS127 ASN128 SER129 GLU130 ALA131 THR132 LEU133 PRO134 ILE135 ALA136 VAL137 ARG138 PHE139 ALA140 LYS141 THR142 LEU143 LEU144 ALA145 ASN146 SER147 SER148 PRO149 PHE150 ASN151 VAL152 ASP153 THR154 GLY155 ALA156 MET157 ALA158 THR159 LEU160 ALA161 LEU162 THR163 CYS164 MET165 TYR166 ASN167 LYS168 ILE169 PRO170 VAL171 GLY172 SER173 GLU174 GLU175 GLY176 TYR177 ARG178 SER179 LEU180 PHE181 GLY182 GLN183 VAL184 LEU185 LYS186 ASP187 ILE188 VAL189 GLU190 LYS191 ILE192 SER193 MET194 LYS195 ILE196 LYS197 ASP198 ASN199 GLY200 ILE201 ILE202 GLY203 ASP204 ILE205 TYR206 SER207 THR208 GLY209 LEU210 ALA211 MET212 GLN213 ALA214 LEU215 SER216 VAL217 THR218 PRO219 GLU220 PRO221 SER222 LYS223 LYS224 GLU225 TRP226 ASN227 CYS228 LYS229 LYS230 THR231 THR232 ASP233 MET234 ILE235 LEU236 ASN237 GLU238 ILE239 LYS240 GLN241 GLY242 LYS243 PHE244 HIS245 ASN246 PRO247 MET248 SER249 ILE250 ALA251 GLN252 ILE253 LEU254 PRO255 SER256 LEU257 LYS258 GLY259 LYS260 THR261 TYR262 LEU263 ASP264 VAL265 PRO266 GLN267 VAL268 THR269 CYS270 SER271 PRO272 ASP273
Ligands
Unit 5 NAG1 NAG2
Unit 6 NAG1 NAG2
Unit 7 B121001
Unit 8 B121002
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany