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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PREDICTED NUCLEOTIDE-BINDING PROTEIN FR CHOLERAE
Keywords STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NEW STRUCTURAL GENOMICS RESEARCH CONSORTIUM, NYSGRC, NEW YORK S RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, UNKNOWN F
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2PMB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UNCHARACTERIZED PROTEIN  A 437 3301 136
2  Protein   UNCHARACTERIZED PROTEIN  B 437 3300 136
3  Protein   UNCHARACTERIZED PROTEIN  C 434 3276 136
4  Protein   UNCHARACTERIZED PROTEIN  D 437 3299 136
5  Ligand   UNCHARACTERIZED PROTEIN  A 2 0 10
6  Ligand   UNCHARACTERIZED PROTEIN  B 5 0 26
7  Ligand   UNCHARACTERIZED PROTEIN  C 4 0 21
8  Ligand   UNCHARACTERIZED PROTEIN  D 3 0 15
9 Water     543 0 543
total       2302 13176 1159

Proteins
Unit 1 SER5 LEU6 ILE7 ILE8 GLN9 VAL10 SER11 PRO12 SER15 MSE16 ASP17 LEU18 LEU19 SER20 GLN21 LEU22 GLU23 VAL24 GLU25 ARG26 LEU27 LYS28 LYS29 THR30 ALA31 SER32 SER33 ASP34 LEU35 TYR36 GLN37 LEU38 TYR39 ARG40 ASN41 CYS42 SER43 LEU44 ALA45 VAL46 LEU47 ASN48 SER49 THR53 ASP54 ASN55 SER56 LYS57 GLU58 LEU59 LEU60 ASP61 LYS62 TYR63 LYS64 ASN65 PHE66 ASP67 ILE68 THR69 VAL70 MSE71 ARG72 ARG73 GLU74 ARG75 GLY76 ILE77 LYS78 LEU79 GLU80 LEU81 ALA82 ASN83 PRO84 PRO85 GLU86 HIS87 ALA88 PHE89 VAL90 ASP91 GLY92 GLN93 ILE94 ILE95 LYS96 GLY97 ILE98 GLN99 GLU100 HIS101 LEU102 PHE103 SER104 VAL105 LEU106 ARG107 ASP108 ILE109 VAL110 TYR111 VAL112 ASN113 MSE114 HIS115 LEU116 ASN126 ALA127 THR128 HIS129 ILE130 THR131 ASN132 LEU133 VAL134 PHE135 GLY136 ILE137 LEU138 ARG139 ASN140 ALA141 GLY142 ALA143 LEU144 ILE145 PRO146 GLY147 ALA148 THR149 PRO150 ASN151 LEU152 VAL153 VAL154 CYS155 TRP156 GLY157 GLY158 HIS159 SER160 ILE161 ASN162 GLU163 VAL164 GLU165 TYR166 GLN167 TYR168 THR169 ARG170 GLU171 VAL172 GLY173 HIS174 GLU175 LEU176 GLY177 LEU178 ARG179 GLU180 LEU181 ASN182 ILE183 CYS184 THR185 GLY186 CYS187 GLY188 PRO189 GLY190 ALA191 MSE192 GLU193 GLY194 PRO195 MSE196 LYS197 GLY198 ALA199 ALA200 VAL201 GLY202 HIS203 ALA204 LYS205 GLN206 ARG207 TYR208 SER209 GLU210 TYR211 ARG212 TYR213 LEU214 GLY215 LEU216 THR217 GLU218 PRO219 SER220 ILE221 ILE222 ALA223 ALA224 GLU225 PRO226 PRO227 ASN228 PRO229 ILE230 VAL231 ASN232 GLU233 LEU234 VAL235 ILE236 MSE237 PRO238 ASP239 ILE240 GLU241 LYS242 ARG243 LEU244 GLU245 ALA246 PHE247 VAL248 ARG249 MSE250 ALA251 HIS252 GLY253 ILE254 ILE255 ILE256 PHE257 PRO258 GLY259 GLY260 PRO261 GLY262 THR263 ALA264 GLU265 GLU266 LEU267 LEU268 TYR269 ILE270 LEU271 GLY272 ILE273 MSE274 MSE275 HIS276 PRO277 GLU278 ASN279 ALA280 ASP281 GLN282 PRO283 MSE284 PRO285 ILE286 VAL287 LEU288 THR289 GLY290 PRO291 LYS292 GLN293 SER294 GLU295 ALA296 TYR297 PHE298 ARG299 SER300 LEU301 ASP302 LYS303 PHE304 ILE305 THR306 ASP307 THR308 LEU309 GLY310 GLU311 ALA312 ALA313 ARG314 LYS315 HIS316 TYR317 SER318 ILE319 ALA320 ILE321 ASP322 ASN323 PRO324 ALA325 GLU326 ALA327 ALA328 ARG329 ILE330 MSE331 SER332 ASN333 ALA334 MSE335 PRO336 LEU337 VAL338 ARG339 GLN340 HIS341 ARG342 LYS343 ASP344 LYS345 GLU346 ASP347 ALA348 TYR349 SER350 PHE351 ASN352 TRP353 SER354 LEU355 LYS356 ILE357 GLU358 PRO359 GLU360 PHE361 GLN362 LEU363 PRO364 PHE365 GLU366 PRO367 ASN368 HIS369 GLU370 SER371 MSE372 ALA373 ASN374 LEU375 ASP376 LEU377 HIS378 LEU379 ASN380 GLN381 ARG382 PRO383 GLU384 VAL385 LEU386 ALA387 ALA388 ASN389 LEU390 ARG391 ARG392 ALA393 PHE394 SER395 GLY396 VAL397 VAL398 ALA399 GLY400 ASN401 VAL402 LYS403 ALA404 GLU405 GLY406 ILE407 ARG408 GLU409 ILE410 GLU411 ARG412 HIS413 GLY414 PRO415 PHE416 GLU417 MSE418 HIS419 GLY420 ASP421 PRO422 VAL423 LEU424 MSE425 LYS426 LYS427 MSE428 ASP429 GLN430 LEU431 LEU432 ASN433 ASP434 PHE435 VAL436 ALA437 GLN438 ASN439 ARG440 MSE441 LYS442 LEU443 PRO444 GLY445 SER447 ALA448 TYR449 GLU450 PRO451 CYS452 TYR453 LYS454 ILE455 VAL456
Unit 2 SER5 LEU6 ILE7 ILE8 GLN9 VAL10 SER11 PRO12 SER15 MSE16 ASP17 LEU18 LEU19 SER20 GLN21 LEU22 GLU23 VAL24 GLU25 ARG26 LEU27 LYS28 LYS29 THR30 SER32 SER33 ASP34 LEU35 TYR36 GLN37 LEU38 TYR39 ARG40 ASN41 CYS42 SER43 LEU44 ALA45 VAL46 LEU47 ASN48 SER49 THR53 ASP54 ASN55 SER56 LYS57 GLU58 LEU59 LEU60 ASP61 LYS62 TYR63 LYS64 ASN65 PHE66 ASP67 ILE68 THR69 VAL70 MSE71 ARG72 ARG73 GLU74 ARG75 GLY76 ILE77 LYS78 LEU79 GLU80 LEU81 ALA82 ASN83 PRO84 PRO85 GLU86 HIS87 ALA88 PHE89 VAL90 ASP91 GLY92 GLN93 ILE94 ILE95 LYS96 GLY97 ILE98 GLN99 GLU100 HIS101 LEU102 PHE103 SER104 VAL105 LEU106 ARG107 ASP108 ILE109 VAL110 TYR111 VAL112 ASN113 MSE114 HIS115 LEU116 ASN126 ALA127 THR128 HIS129 ILE130 THR131 ASN132 LEU133 VAL134 PHE135 GLY136 ILE137 LEU138 ARG139 ASN140 ALA141 GLY142 ALA143 LEU144 ILE145 PRO146 GLY147 ALA148 THR149 PRO150 ASN151 LEU152 VAL153 VAL154 CYS155 TRP156 GLY157 GLY158 HIS159 SER160 ILE161 ASN162 GLU163 VAL164 GLU165 TYR166 GLN167 TYR168 THR169 ARG170 GLU171 VAL172 GLY173 HIS174 GLU175 LEU176 GLY177 LEU178 ARG179 GLU180 LEU181 ASN182 ILE183 CYS184 THR185 GLY186 CYS187 GLY188 PRO189 GLY190 ALA191 MSE192 GLU193 GLY194 PRO195 MSE196 LYS197 GLY198 ALA199 ALA200 VAL201 GLY202 HIS203 ALA204 LYS205 GLN206 ARG207 TYR208 SER209 GLU210 TYR211 ARG212 TYR213 LEU214 GLY215 LEU216 THR217 GLU218 PRO219 SER220 ILE221 ILE222 ALA223 ALA224 GLU225 PRO226 PRO227 ASN228 PRO229 ILE230 VAL231 ASN232 GLU233 LEU234 VAL235 ILE236 MSE237 PRO238 ASP239 ILE240 GLU241 LYS242 ARG243 LEU244 GLU245 ALA246 PHE247 VAL248 ARG249 MSE250 ALA251 HIS252 GLY253 ILE254 ILE255 ILE256 PHE257 PRO258 GLY259 GLY260 PRO261 GLY262 THR263 ALA264 GLU265 GLU266 LEU267 LEU268 TYR269 ILE270 LEU271 GLY272 ILE273 MSE274 MSE275 HIS276 PRO277 GLU278 ASN279 ALA280 ASP281 GLN282 PRO283 MSE284 PRO285 ILE286 VAL287 LEU288 THR289 GLY290 PRO291 LYS292 GLN293 SER294 GLU295 ALA296 TYR297 PHE298 ARG299 SER300 LEU301 ASP302 LYS303 PHE304 ILE305 THR306 ASP307 THR308 LEU309 GLY310 GLU311 ALA312 ALA313 ARG314 LYS315 HIS316 TYR317 SER318 ILE319 ALA320 ILE321 ASP322 ASN323 PRO324 ALA325 GLU326 ALA327 ALA328 ARG329 ILE330 MSE331 SER332 ASN333 ALA334 MSE335 PRO336 LEU337 VAL338 ARG339 GLN340 HIS341 ARG342 LYS343 ASP344 LYS345 GLU346 ASP347 ALA348 TYR349 SER350 PHE351 ASN352 TRP353 SER354 LEU355 LYS356 ILE357 GLU358 PRO359 GLU360 PHE361 GLN362 LEU363 PRO364 PHE365 GLU366 PRO367 ASN368 HIS369 GLU370 SER371 MSE372 ALA373 ASN374 LEU375 ASP376 LEU377 HIS378 LEU379 ASN380 GLN381 ARG382 PRO383 GLU384 VAL385 LEU386 ALA387 ALA388 ASN389 LEU390 ARG391 ARG392 ALA393 PHE394 SER395 GLY396 VAL397 VAL398 ALA399 GLY400 ASN401 VAL402 LYS403 ALA404 GLU405 GLY406 ILE407 ARG408 GLU409 ILE410 GLU411 ARG412 HIS413 GLY414 PRO415 PHE416 GLU417 MSE418 HIS419 GLY420 ASP421 PRO422 VAL423 LEU424 MSE425 LYS426 LYS427 MSE428 ASP429 GLN430 LEU431 LEU432 ASN433 ASP434 PHE435 VAL436 ALA437 GLN438 ASN439 ARG440 MSE441 LYS442 LEU443 PRO444 GLY445 GLY446 SER447 ALA448 TYR449 GLU450 PRO451 CYS452 TYR453 LYS454 ILE455 VAL456
Unit 3 SER5 LEU6 ILE7 ILE8 GLN9 VAL10 SER11 PRO12 SER15 MSE16 ASP17 LEU18 LEU19 SER20 GLN21 LEU22 GLU23 VAL24 GLU25 ARG26 LEU27 LYS28 LYS29 SER33 ASP34 LEU35 TYR36 GLN37 LEU38 TYR39 ARG40 ASN41 CYS42 SER43 LEU44 ALA45 VAL46 LEU47 ASN48 SER49 GLY50 ASN55 SER56 LYS57 GLU58 LEU59 LEU60 ASP61 LYS62 TYR63 LYS64 ASN65 PHE66 ASP67 ILE68 THR69 VAL70 MSE71 ARG72 ARG73 GLU74 ARG75 GLY76 ILE77 LYS78 LEU79 GLU80 LEU81 ALA82 ASN83 PRO84 PRO85 GLU86 HIS87 ALA88 PHE89 VAL90 ASP91 GLY92 GLN93 ILE94 ILE95 LYS96 GLY97 ILE98 GLN99 GLU100 HIS101 LEU102 PHE103 SER104 VAL105 LEU106 ARG107 ASP108 ILE109 VAL110 TYR111 VAL112 ASN113 MSE114 HIS115 LEU116 ASN126 ALA127 THR128 HIS129 ILE130 THR131 ASN132 LEU133 VAL134 PHE135 GLY136 ILE137 LEU138 ARG139 ASN140 ALA141 GLY142 ALA143 LEU144 ILE145 PRO146 GLY147 ALA148 THR149 PRO150 ASN151 LEU152 VAL153 VAL154 CYS155 TRP156 GLY157 GLY158 HIS159 SER160 ILE161 ASN162 GLU163 VAL164 GLU165 TYR166 GLN167 TYR168 THR169 ARG170 GLU171 VAL172 GLY173 HIS174 GLU175 LEU176 GLY177 LEU178 ARG179 GLU180 LEU181 ASN182 ILE183 CYS184 THR185 GLY186 CYS187 GLY188 PRO189 GLY190 ALA191 MSE192 GLU193 GLY194 PRO195 MSE196 LYS197 GLY198 ALA199 ALA200 VAL201 GLY202 HIS203 ALA204 LYS205 GLN206 ARG207 TYR208 SER209 GLU210 TYR211 ARG212 TYR213 LEU214 GLY215 LEU216 THR217 GLU218 PRO219 SER220 ILE221 ILE222 ALA223 ALA224 GLU225 PRO226 PRO227 ASN228 PRO229 ILE230 VAL231 ASN232 GLU233 LEU234 VAL235 ILE236 MSE237 PRO238 ASP239 ILE240 GLU241 LYS242 ARG243 LEU244 GLU245 ALA246 PHE247 VAL248 ARG249 MSE250 ALA251 HIS252 GLY253 ILE254 ILE255 ILE256 PHE257 PRO258 GLY259 GLY260 PRO261 GLY262 THR263 ALA264 GLU265 GLU266 LEU267 LEU268 TYR269 ILE270 LEU271 GLY272 ILE273 MSE274 MSE275 HIS276 PRO277 GLU278 ASN279 ALA280 ASP281 GLN282 PRO283 MSE284 PRO285 ILE286 VAL287 LEU288 THR289 GLY290 PRO291 LYS292 GLN293 SER294 GLU295 ALA296 TYR297 PHE298 ARG299 SER300 LEU301 ASP302 LYS303 PHE304 ILE305 THR306 ASP307 THR308 LEU309 GLY310 GLU311 ALA312 ALA313 ARG314 LYS315 HIS316 TYR317 SER318 ILE319 ALA320 ILE321 ASP322 ASN323 PRO324 ALA325 GLU326 ALA327 ALA328 ARG329 ILE330 MSE331 SER332 ASN333 ALA334 MSE335 PRO336 LEU337 VAL338 ARG339 GLN340 HIS341 ARG342 LYS343 ASP344 LYS345 GLU346 ASP347 ALA348 TYR349 SER350 PHE351 ASN352 TRP353 SER354 LEU355 LYS356 ILE357 GLU358 PRO359 GLU360 PHE361 GLN362 LEU363 PRO364 PHE365 GLU366 PRO367 ASN368 HIS369 GLU370 SER371 MSE372 ALA373 ASN374 LEU375 ASP376 LEU377 HIS378 LEU379 ASN380 GLN381 ARG382 PRO383 GLU384 VAL385 LEU386 ALA387 ALA388 ASN389 LEU390 ARG391 ARG392 ALA393 PHE394 SER395 GLY396 VAL397 VAL398 ALA399 GLY400 ASN401 VAL402 LYS403 ALA404 GLU405 GLY406 ILE407 ARG408 GLU409 ILE410 GLU411 ARG412 HIS413 GLY414 PRO415 PHE416 GLU417 MSE418 HIS419 GLY420 ASP421 PRO422 VAL423 LEU424 MSE425 LYS426 LYS427 MSE428 ASP429 GLN430 LEU431 LEU432 ASN433 ASP434 PHE435 VAL436 ALA437 GLN438 ASN439 ARG440 MSE441 LYS442 LEU443 PRO444 GLY445 GLY446 SER447 ALA448 TYR449 GLU450 PRO451 CYS452 TYR453 LYS454 ILE455 VAL456
Unit 4 SER5 LEU6 ILE7 ILE8 GLN9 VAL10 SER11 PRO12 SER15 MSE16 ASP17 LEU18 LEU19 SER20 GLN21 LEU22 GLU23 VAL24 GLU25 ARG26 LEU27 LYS28 LYS29 THR30 SER33 ASP34 LEU35 TYR36 GLN37 LEU38 TYR39 ARG40 ASN41 CYS42 SER43 LEU44 ALA45 VAL46 LEU47 ASN48 SER49 THR53 ASP54 ASN55 SER56 LYS57 GLU58 LEU59 LEU60 ASP61 LYS62 TYR63 LYS64 ASN65 PHE66 ASP67 ILE68 THR69 VAL70 MSE71 ARG72 ARG73 GLU74 ARG75 GLY76 ILE77 LYS78 LEU79 GLU80 LEU81 ALA82 ASN83 PRO84 PRO85 GLU86 HIS87 ALA88 PHE89 VAL90 ASP91 GLY92 GLN93 ILE94 ILE95 LYS96 GLY97 ILE98 GLN99 GLU100 HIS101 LEU102 PHE103 SER104 VAL105 LEU106 ARG107 ASP108 ILE109 VAL110 TYR111 VAL112 ASN113 MSE114 HIS115 LEU116 ALA117 ASN126 ALA127 THR128 HIS129 ILE130 THR131 ASN132 LEU133 VAL134 PHE135 GLY136 ILE137 LEU138 ARG139 ASN140 ALA141 GLY142 ALA143 LEU144 ILE145 PRO146 GLY147 ALA148 THR149 PRO150 ASN151 LEU152 VAL153 VAL154 CYS155 TRP156 GLY157 GLY158 HIS159 SER160 ILE161 ASN162 GLU163 VAL164 GLU165 TYR166 GLN167 TYR168 THR169 ARG170 GLU171 VAL172 GLY173 HIS174 GLU175 LEU176 GLY177 LEU178 ARG179 GLU180 LEU181 ASN182 ILE183 CYS184 THR185 GLY186 CYS187 GLY188 PRO189 GLY190 ALA191 MSE192 GLU193 GLY194 PRO195 MSE196 LYS197 GLY198 ALA199 ALA200 VAL201 GLY202 HIS203 ALA204 LYS205 GLN206 ARG207 TYR208 SER209 GLU210 TYR211 ARG212 TYR213 LEU214 GLY215 LEU216 THR217 GLU218 PRO219 SER220 ILE221 ILE222 ALA223 ALA224 GLU225 PRO226 PRO227 ASN228 PRO229 ILE230 VAL231 ASN232 GLU233 LEU234 VAL235 ILE236 MSE237 PRO238 ASP239 ILE240 GLU241 LYS242 ARG243 LEU244 GLU245 ALA246 PHE247 VAL248 ARG249 MSE250 ALA251 HIS252 GLY253 ILE254 ILE255 ILE256 PHE257 PRO258 GLY259 GLY260 PRO261 GLY262 THR263 ALA264 GLU265 GLU266 LEU267 LEU268 TYR269 ILE270 LEU271 GLY272 ILE273 MSE274 MSE275 HIS276 PRO277 GLU278 ASN279 ALA280 ASP281 GLN282 PRO283 MSE284 PRO285 ILE286 VAL287 LEU288 THR289 GLY290 PRO291 LYS292 GLN293 SER294 GLU295 ALA296 TYR297 PHE298 ARG299 SER300 LEU301 ASP302 LYS303 PHE304 ILE305 THR306 ASP307 THR308 LEU309 GLY310 GLU311 ALA312 ALA313 ARG314 LYS315 HIS316 TYR317 SER318 ILE319 ALA320 ILE321 ASP322 ASN323 PRO324 ALA325 GLU326 ALA327 ALA328 ARG329 ILE330 MSE331 SER332 ASN333 ALA334 MSE335 PRO336 LEU337 VAL338 ARG339 GLN340 HIS341 ARG342 LYS343 ASP344 LYS345 GLU346 ASP347 ALA348 TYR349 SER350 PHE351 ASN352 TRP353 SER354 LEU355 LYS356 ILE357 GLU358 PRO359 GLU360 PHE361 GLN362 LEU363 PRO364 PHE365 GLU366 PRO367 ASN368 HIS369 GLU370 SER371 MSE372 ALA373 ASN374 LEU375 ASP376 LEU377 HIS378 LEU379 ASN380 GLN381 ARG382 PRO383 GLU384 VAL385 LEU386 ALA387 ALA388 ASN389 LEU390 ARG391 ARG392 ALA393 PHE394 SER395 GLY396 VAL397 VAL398 ALA399 GLY400 ASN401 VAL402 LYS403 ALA404 GLU405 GLY406 ILE407 ARG408 GLU409 ILE410 GLU411 ARG412 HIS413 GLY414 PRO415 PHE416 GLU417 MSE418 HIS419 GLY420 ASP421 PRO422 VAL423 LEU424 MSE425 LYS426 LYS427 MSE428 ASP429 GLN430 LEU431 LEU432 ASN433 ASP434 PHE435 VAL436 ALA437 GLN438 ASN439 ARG440 MSE441 LYS442 LEU443 PRO444 GLY445 GLY446 SER447 ALA448 TYR449 GLU450 PRO451 CYS452 TYR453 LYS454 ILE455 VAL456

Ligands
Unit 5 PO4604 PO4610
Unit 6 PO4603 PO4607 PO4609 PO4612 GOL702
Unit 7 PO4605 PO4608 PO4611 GOL701
Unit 8 PO4601 PO4602 PO4606

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany