2P42 - Sequence, Chains, Asymmetric and Biological Units

• Title: COMPLEX OF A CAMELID SINGLE-DOMAIN VHH ANTIBODY FRAGMENT WIT AT 1.8A RESOLUTION: SE3-MONO-2 CRYSTAL FORM WITH THREE SE-M (M34, M51, M83) IN VHH SCAFFOLD
• Keywords: SEMET PHASING, CAMELID SINGLE-DOMAIN ANTIBODY, VHH, CAB-RN05 A, YEAST SURFACE DISPLAY., HYDROLASE-IMMUNE SYSTEM COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2P42	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RIBONUCLEASE PANCREATIC	A	124	951	0
2	Protein	ANTIBODY CAB-RN05	B	121	886	24
3	Protein	RIBONUCLEASE PANCREATIC	C	124	951	0
4	Protein	ANTIBODY CAB-RN05	D	121	886	24
5	Ligand	RIBONUCLEASE PANCREATIC	A	1	0	1
6	Water			473	0	473
total				964	3674	522

Proteins

Unit 1	LYS 1 GLU 2 THR 3 ALA 4 ALA 5 ALA 6 LYS 7 PHE 8 GLU 9 ARG 10 GLN 11 HIS 12 MET 13 ASP 14 SER 15 SER 16 THR 17 SER 18 ALA 19 ALA 20 SER 21 SER 22 SER 23 ASN 24 TYR 25 CYS 26 ASN 27 GLN 28 MET 29 MET 30 LYS 31 SER 32 ARG 33 ASN 34 LEU 35 THR 36 LYS 37 ASP 38 ARG 39 CYS 40 LYS 41 PRO 42 VAL 43 ASN 44 THR 45 PHE 46 VAL 47 HIS 48 GLU 49 SER 50 LEU 51 ALA 52 ASP 53 VAL 54 GLN 55 ALA 56 VAL 57 CYS 58 SER 59 GLN 60 LYS 61 ASN 62 VAL 63 ALA 64 CYS 65 LYS 66 ASN 67 GLY 68 GLN 69 THR 70 ASN 71 CYS 72 TYR 73 GLN 74 SER 75 TYR 76 SER 77 THR 78 MET 79 SER 80 ILE 81 THR 82 ASP 83 CYS 84 ARG 85 GLU 86 THR 87 GLY 88 SER 89 SER 90 LYS 91 TYR 92 PRO 93 ASN 94 CYS 95 ALA 96 TYR 97 LYS 98 THR 99 THR 100 GLN 101 ALA 102 ASN 103 LYS 104 HIS 105 ILE 106 ILE 107 VAL 108 ALA 109 CYS 110 GLU 111 GLY 112 ASN 113 PRO 114 TYR 115 VAL 116 PRO 117 VAL 118 HIS 119 PHE 120 ASP 121 ALA 122 SER 123 VAL 124
Unit 2	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 ALA 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 TYR 27 ALA 28 TYR 29 THR 30 TYR 31 ILE 32 TYR 33 MSE 34 GLY 35 TRP 36 PHE 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLU 44 ARG 45 GLU 46 GLY 47 VAL 48 ALA 49 ALA 50 MSE 51 ASP 52 SER 53 GLY 54 GLY 55 GLY 56 GLY 57 THR 58 LEU 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 LYS 74 GLY 75 LYS 76 ASN 77 THR 78 VAL 79 TYR 80 LEU 81 GLN 82 MSE 83 ASP 84 SER 85 LEU 86 LYS 87 PRO 88 GLU 89 ASP 90 THR 91 ALA 92 THR 93 TYR 94 TYR 95 CYS 96 ALA 97 ALA 98 GLY 99 GLY 100 TYR 101 GLU 102 LEU 103 ARG 104 ASP 105 ARG 106 THR 107 TYR 108 GLY 109 GLN 110 TRP 111 GLY 112 GLN 113 GLY 114 THR 115 GLN 116 VAL 117 THR 118 VAL 119 SER 120 SER 121
Unit 3	LYS 1 GLU 2 THR 3 ALA 4 ALA 5 ALA 6 LYS 7 PHE 8 GLU 9 ARG 10 GLN 11 HIS 12 MET 13 ASP 14 SER 15 SER 16 THR 17 SER 18 ALA 19 ALA 20 SER 21 SER 22 SER 23 ASN 24 TYR 25 CYS 26 ASN 27 GLN 28 MET 29 MET 30 LYS 31 SER 32 ARG 33 ASN 34 LEU 35 THR 36 LYS 37 ASP 38 ARG 39 CYS 40 LYS 41 PRO 42 VAL 43 ASN 44 THR 45 PHE 46 VAL 47 HIS 48 GLU 49 SER 50 LEU 51 ALA 52 ASP 53 VAL 54 GLN 55 ALA 56 VAL 57 CYS 58 SER 59 GLN 60 LYS 61 ASN 62 VAL 63 ALA 64 CYS 65 LYS 66 ASN 67 GLY 68 GLN 69 THR 70 ASN 71 CYS 72 TYR 73 GLN 74 SER 75 TYR 76 SER 77 THR 78 MET 79 SER 80 ILE 81 THR 82 ASP 83 CYS 84 ARG 85 GLU 86 THR 87 GLY 88 SER 89 SER 90 LYS 91 TYR 92 PRO 93 ASN 94 CYS 95 ALA 96 TYR 97 LYS 98 THR 99 THR 100 GLN 101 ALA 102 ASN 103 LYS 104 HIS 105 ILE 106 ILE 107 VAL 108 ALA 109 CYS 110 GLU 111 GLY 112 ASN 113 PRO 114 TYR 115 VAL 116 PRO 117 VAL 118 HIS 119 PHE 120 ASP 121 ALA 122 SER 123 VAL 124
Unit 4	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 ALA 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 TYR 27 ALA 28 TYR 29 THR 30 TYR 31 ILE 32 TYR 33 MSE 34 GLY 35 TRP 36 PHE 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLU 44 ARG 45 GLU 46 GLY 47 VAL 48 ALA 49 ALA 50 MSE 51 ASP 52 SER 53 GLY 54 GLY 55 GLY 56 GLY 57 THR 58 LEU 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 LYS 74 GLY 75 LYS 76 ASN 77 THR 78 VAL 79 TYR 80 LEU 81 GLN 82 MSE 83 ASP 84 SER 85 LEU 86 LYS 87 PRO 88 GLU 89 ASP 90 THR 91 ALA 92 THR 93 TYR 94 TYR 95 CYS 96 ALA 97 ALA 98 GLY 99 GLY 100 TYR 101 GLU 102 LEU 103 ARG 104 ASP 105 ARG 106 THR 107 TYR 108 GLY 109 GLN 110 TRP 111 GLY 112 GLN 113 GLY 114 THR 115 GLN 116 VAL 117 THR 118 VAL 119 SER 120 SER 121

Ligands

Unit 5

MG 201