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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF SALMONELLA TYPHIMURIUM YEGS, A PUTATIVE KINASE HOMOLOGOUS TO EUKARYOTIC SPHINGOSINE AND DIACYLGLYCE KINASES.
Keywords YEGS, DIACYLGLYCEROL, KINASE, LIPID, ATP-BINDING, MAGNESIUM, BINDING, TRANSFERASE, ----
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2P1R     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LIPID KINASE YEGS  A 290 2124 56
2  Protein   LIPID KINASE YEGS  B 290 2124 56
3  Protein   LIPID KINASE YEGS  C 283 2072 56
4  Protein   LIPID KINASE YEGS  D 283 2072 56
5  Ligand   LIPID KINASE YEGS  A 3 0 3
6  Ligand   LIPID KINASE YEGS  B 3 0 3
7  Ligand   LIPID KINASE YEGS  C 4 0 4
8  Ligand   LIPID KINASE YEGS  D 4 0 4
9 Water     414 0 414
total       1574 8392 652
Proteins
Unit 1 MSE1 ALA2 ASN3 PHE4 PRO5 ALA6 SER7 LEU8 LEU9 ILE10 LEU11 ASN12 GLY13 LYS14 SER15 ALA16 ASP17 ASN18 GLN19 PRO20 LEU21 ARG22 GLU23 ALA24 ILE25 THR26 LEU27 LEU28 ARG29 ASP30 GLU31 GLY32 ILE33 GLN34 ILE35 HIS36 VAL37 ARG38 VAL39 THR40 TRP41 GLU42 LYS43 GLY44 ASP45 ALA46 GLN47 ARG48 TYR49 VAL50 ASP51 GLU52 ALA53 ARG54 ARG55 LEU56 GLY57 VAL58 GLU59 THR60 VAL61 ILE62 ALA63 GLY64 GLY65 GLY66 ASP67 GLY68 THR69 ILE70 ASN71 GLU72 VAL73 SER74 THR75 ALA76 LEU77 ILE78 GLN79 ILE80 ARG81 ASP82 GLY83 VAL84 ALA85 PRO86 ALA87 LEU88 GLY89 LEU90 LEU91 PRO92 LEU93 GLY94 THR95 ALA96 ASN97 ASP98 PHE99 ALA100 THR101 SER102 ALA103 GLY104 ILE105 PRO106 GLU107 ALA108 LEU109 ASP110 LYS111 ALA112 LEU113 LYS114 LEU115 ALA116 ILE117 ALA118 GLY119 ASN120 ALA121 MSE122 GLU123 ILE124 ASP125 MSE126 ALA127 MSE128 VAL129 ASN130 ASP131 LYS132 THR133 CYS134 PHE135 ILE136 ASN137 MSE138 ALA139 THR140 GLY141 GLY142 PHE143 GLY144 THR145 ARG146 ILE147 THR148 THR149 LEU159 GLY160 GLY161 VAL162 SER163 TYR164 LEU165 ILE166 HIS167 GLY168 LEU169 MSE170 ARG171 MSE172 ASP173 THR174 LEU175 THR176 PRO177 ASP178 ARG179 CYS180 GLU181 ILE182 ARG183 GLY184 GLU185 ASN186 PHE187 HIS188 TRP189 GLN190 GLY191 ASP192 ALA193 LEU194 VAL195 ILE196 GLY197 ILE198 GLY199 ASN200 GLY201 ARG202 GLN203 ALA204 GLY205 GLY206 GLY207 GLN208 GLN209 LEU210 CYS211 PRO212 THR213 ALA214 LEU215 ILE216 ASN217 ASP218 GLY219 LEU220 LEU221 GLN222 LEU223 ARG224 ILE225 PHE226 THR227 GLY228 GLU229 GLU230 LEU231 LEU232 PRO233 ALA234 LEU235 PHE236 SER237 THR238 LEU239 THR240 GLN241 SER242 ASP243 ASP244 ASN245 PRO246 ASN247 ILE248 ILE249 ASP250 GLY251 ALA252 SER253 ALA254 TRP255 PHE256 ASP257 ILE258 HIS259 ALA260 PRO261 HIS262 GLU263 ILE264 THR265 PHE266 ASN267 LEU268 ASP269 GLY270 GLU271 PRO272 LEU273 SER274 GLY275 GLN276 GLU277 PHE278 HIS279 ILE280 GLU281 VAL282 LEU283 PRO284 GLY285 ALA286 LEU287 ARG288 CYS289 ARG290 LEU291 PRO292 PRO293 ASP294 CYS295 PRO296 LEU297 LEU298 ARG299
Unit 2 MSE1 ALA2 ASN3 PHE4 PRO5 ALA6 SER7 LEU8 LEU9 ILE10 LEU11 ASN12 GLY13 LYS14 SER15 ALA16 ASP17 ASN18 GLN19 PRO20 LEU21 ARG22 GLU23 ALA24 ILE25 THR26 LEU27 LEU28 ARG29 ASP30 GLU31 GLY32 ILE33 GLN34 ILE35 HIS36 VAL37 ARG38 VAL39 THR40 TRP41 GLU42 LYS43 GLY44 ASP45 ALA46 GLN47 ARG48 TYR49 VAL50 ASP51 GLU52 ALA53 ARG54 ARG55 LEU56 GLY57 VAL58 GLU59 THR60 VAL61 ILE62 ALA63 GLY64 GLY65 GLY66 ASP67 GLY68 THR69 ILE70 ASN71 GLU72 VAL73 SER74 THR75 ALA76 LEU77 ILE78 GLN79 ILE80 ARG81 ASP82 GLY83 VAL84 ALA85 PRO86 ALA87 LEU88 GLY89 LEU90 LEU91 PRO92 LEU93 GLY94 THR95 ALA96 ASN97 ASP98 PHE99 ALA100 THR101 SER102 ALA103 GLY104 ILE105 PRO106 GLU107 ALA108 LEU109 ASP110 LYS111 ALA112 LEU113 LYS114 LEU115 ALA116 ILE117 ALA118 GLY119 ASN120 ALA121 MSE122 GLU123 ILE124 ASP125 MSE126 ALA127 MSE128 VAL129 ASN130 ASP131 LYS132 THR133 CYS134 PHE135 ILE136 ASN137 MSE138 ALA139 THR140 GLY141 GLY142 PHE143 GLY144 THR145 ARG146 ILE147 THR148 THR149 LEU159 GLY160 GLY161 VAL162 SER163 TYR164 LEU165 ILE166 HIS167 GLY168 LEU169 MSE170 ARG171 MSE172 ASP173 THR174 LEU175 THR176 PRO177 ASP178 ARG179 CYS180 GLU181 ILE182 ARG183 GLY184 GLU185 ASN186 PHE187 HIS188 TRP189 GLN190 GLY191 ASP192 ALA193 LEU194 VAL195 ILE196 GLY197 ILE198 GLY199 ASN200 GLY201 ARG202 GLN203 ALA204 GLY205 GLY206 GLY207 GLN208 GLN209 LEU210 CYS211 PRO212 THR213 ALA214 LEU215 ILE216 ASN217 ASP218 GLY219 LEU220 LEU221 GLN222 LEU223 ARG224 ILE225 PHE226 THR227 GLY228 GLU229 GLU230 LEU231 LEU232 PRO233 ALA234 LEU235 PHE236 SER237 THR238 LEU239 THR240 GLN241 SER242 ASP243 ASP244 ASN245 PRO246 ASN247 ILE248 ILE249 ASP250 GLY251 ALA252 SER253 ALA254 TRP255 PHE256 ASP257 ILE258 HIS259 ALA260 PRO261 HIS262 GLU263 ILE264 THR265 PHE266 ASN267 LEU268 ASP269 GLY270 GLU271 PRO272 LEU273 SER274 GLY275 GLN276 GLU277 PHE278 HIS279 ILE280 GLU281 VAL282 LEU283 PRO284 GLY285 ALA286 LEU287 ARG288 CYS289 ARG290 LEU291 PRO292 PRO293 ASP294 CYS295 PRO296 LEU297 LEU298 ARG299
Unit 3 MSE1 ALA2 ASN3 PHE4 PRO5 ALA6 SER7 LEU8 LEU9 ILE10 LEU11 ASN12 GLY13 LYS14 SER15 ALA16 ASP17 ASN18 GLN19 PRO20 LEU21 ARG22 GLU23 ALA24 ILE25 THR26 LEU27 LEU28 ARG29 ASP30 GLU31 GLY32 ILE33 GLN34 ILE35 HIS36 VAL37 ARG38 VAL39 THR40 TRP41 GLU42 LYS43 GLY44 ASP45 ALA46 GLN47 ARG48 TYR49 VAL50 ASP51 GLU52 ALA53 ARG54 ARG55 LEU56 GLY57 VAL58 GLU59 THR60 VAL61 ILE62 ALA63 GLY64 GLY65 GLY66 ASP67 GLY68 THR69 ILE70 ASN71 GLU72 VAL73 SER74 THR75 ALA76 LEU77 ILE78 GLN79 ILE80 ARG81 ASP82 GLY83 VAL84 ALA85 PRO86 ALA87 LEU88 GLY89 LEU90 LEU91 PRO92 LEU93 GLY94 THR95 ALA96 ASN97 ASP98 PHE99 ALA100 THR101 SER102 ALA103 GLY104 ILE105 PRO106 GLU107 ALA108 LEU109 ASP110 LYS111 ALA112 LEU113 LYS114 LEU115 ALA116 ILE117 ALA118 GLY119 ASN120 ALA121 MSE122 GLU123 ILE124 ASP125 MSE126 ALA127 MSE128 VAL129 ASN130 ASP131 LYS132 THR133 CYS134 PHE135 ILE136 ASN137 MSE138 ALA139 THR140 GLY141 GLY142 PHE143 GLY144 GLY161 VAL162 SER163 TYR164 LEU165 ILE166 HIS167 GLY168 LEU169 MSE170 ARG171 MSE172 ASP173 THR174 LEU175 THR176 PRO177 ASP178 ARG179 CYS180 GLU181 ILE182 ARG183 GLY184 GLU185 ASN186 PHE187 HIS188 TRP189 GLN190 GLY191 ASP192 ALA193 LEU194 VAL195 ILE196 GLY197 ILE198 GLY199 ASN200 GLY201 ARG202 GLN203 ALA204 GLY205 GLY206 GLY207 GLN208 GLN209 LEU210 CYS211 PRO212 THR213 ALA214 LEU215 ILE216 ASN217 ASP218 GLY219 LEU220 LEU221 GLN222 LEU223 ARG224 ILE225 PHE226 THR227 GLY228 GLU229 GLU230 LEU231 LEU232 PRO233 ALA234 LEU235 PHE236 SER237 THR238 LEU239 THR240 GLN241 SER242 ASP243 ASP244 ASN245 PRO246 ASN247 ILE248 ILE249 ASP250 GLY251 ALA252 SER253 ALA254 TRP255 PHE256 ASP257 ILE258 HIS259 ALA260 PRO261 HIS262 GLU263 ILE264 THR265 PHE266 ASN267 LEU268 ASP269 GLY270 GLU271 PRO272 LEU273 SER274 GLY275 GLN276 GLU277 PHE278 HIS279 ILE280 GLU281 VAL282 LEU283 PRO284 GLY285 ALA286 LEU287 ARG288 CYS289 ARG290 LEU291 PRO292 PRO293 ASP294 CYS295 PRO296 LEU297 LEU298 ARG299
Unit 4 MSE1 ALA2 ASN3 PHE4 PRO5 ALA6 SER7 LEU8 LEU9 ILE10 LEU11 ASN12 GLY13 LYS14 SER15 ALA16 ASP17 ASN18 GLN19 PRO20 LEU21 ARG22 GLU23 ALA24 ILE25 THR26 LEU27 LEU28 ARG29 ASP30 GLU31 GLY32 ILE33 GLN34 ILE35 HIS36 VAL37 ARG38 VAL39 THR40 TRP41 GLU42 LYS43 GLY44 ASP45 ALA46 GLN47 ARG48 TYR49 VAL50 ASP51 GLU52 ALA53 ARG54 ARG55 LEU56 GLY57 VAL58 GLU59 THR60 VAL61 ILE62 ALA63 GLY64 GLY65 GLY66 ASP67 GLY68 THR69 ILE70 ASN71 GLU72 VAL73 SER74 THR75 ALA76 LEU77 ILE78 GLN79 ILE80 ARG81 ASP82 GLY83 VAL84 ALA85 PRO86 ALA87 LEU88 GLY89 LEU90 LEU91 PRO92 LEU93 GLY94 THR95 ALA96 ASN97 ASP98 PHE99 ALA100 THR101 SER102 ALA103 GLY104 ILE105 PRO106 GLU107 ALA108 LEU109 ASP110 LYS111 ALA112 LEU113 LYS114 LEU115 ALA116 ILE117 ALA118 GLY119 ASN120 ALA121 MSE122 GLU123 ILE124 ASP125 MSE126 ALA127 MSE128 VAL129 ASN130 ASP131 LYS132 THR133 CYS134 PHE135 ILE136 ASN137 MSE138 ALA139 THR140 GLY141 GLY142 PHE143 GLY144 GLY161 VAL162 SER163 TYR164 LEU165 ILE166 HIS167 GLY168 LEU169 MSE170 ARG171 MSE172 ASP173 THR174 LEU175 THR176 PRO177 ASP178 ARG179 CYS180 GLU181 ILE182 ARG183 GLY184 GLU185 ASN186 PHE187 HIS188 TRP189 GLN190 GLY191 ASP192 ALA193 LEU194 VAL195 ILE196 GLY197 ILE198 GLY199 ASN200 GLY201 ARG202 GLN203 ALA204 GLY205 GLY206 GLY207 GLN208 GLN209 LEU210 CYS211 PRO212 THR213 ALA214 LEU215 ILE216 ASN217 ASP218 GLY219 LEU220 LEU221 GLN222 LEU223 ARG224 ILE225 PHE226 THR227 GLY228 GLU229 GLU230 LEU231 LEU232 PRO233 ALA234 LEU235 PHE236 SER237 THR238 LEU239 THR240 GLN241 SER242 ASP243 ASP244 ASN245 PRO246 ASN247 ILE248 ILE249 ASP250 GLY251 ALA252 SER253 ALA254 TRP255 PHE256 ASP257 ILE258 HIS259 ALA260 PRO261 HIS262 GLU263 ILE264 THR265 PHE266 ASN267 LEU268 ASP269 GLY270 GLU271 PRO272 LEU273 SER274 GLY275 GLN276 GLU277 PHE278 HIS279 ILE280 GLU281 VAL282 LEU283 PRO284 GLY285 ALA286 LEU287 ARG288 CYS289 ARG290 LEU291 PRO292 PRO293 ASP294 CYS295 PRO296 LEU297 LEU298 ARG299
Ligands
Unit 5 NA300 CA301 CA302
Unit 6 NA300 CA301 CA302
Unit 7 CA300 CA301 CA302 CL303
Unit 8 CA300 CA301 CA302 CL303
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany