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Sequence, Chains, Asymmetric and Biological Units

Title MECHANISM OF AUXIN PERCEPTION BY THE TIR1 UBIQUITIN LIGASE
Keywords F-BOX, LEUCINE RICH REPEAT, SIGNALING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2P1O     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SKP1-LIKE PROTEIN 1A  A 127 1018 0
2  Protein   TRANSPORT INHIBITOR RESPONSE 1 PROTEIN  B 571 4495 0
3  Protein   AUXIN-RESPONSIVE PROTEIN IAA7  C 13 114 0
4  Ligand   TRANSPORT INHIBITOR RESPONSE 1 PROTEIN  B 2 0 50
5 Water     631 0 631
total       1344 5627 681

Proteins
Unit 1 LYS5 ILE6 VAL7 LEU8 LYS9 SER10 SER11 ASP12 GLY13 GLU14 SER15 PHE16 GLU17 VAL18 GLU19 GLU20 ALA21 VAL22 ALA23 LEU24 GLU25 SER26 GLN27 THR28 ILE29 ALA30 HIS31 MET32 VAL33 GLU34 ASP35 ASP39 ASN40 GLY41 VAL42 PRO43 LEU44 PRO45 ASN46 VAL47 THR48 SER49 LYS50 ILE51 LEU52 ALA53 LYS54 VAL55 ILE56 GLU57 TYR58 CYS59 LYS60 ARG61 HIS62 VAL63 GLU64 MET91 LYS92 ILE93 ASP94 GLN95 ALA96 THR97 LEU98 PHE99 GLU100 LEU101 ILE102 LEU103 ALA104 ALA105 ASN106 TYR107 LEU108 ASN109 ILE110 LYS111 ASN112 LEU113 LEU114 ASP115 LEU116 THR117 CYS118 GLN119 THR120 VAL121 ALA122 ASP123 MET124 ILE125 LYS126 GLY127 LYS128 THR129 PRO130 GLU131 GLU132 ILE133 ARG134 THR135 THR136 PHE137 ASN138 ILE139 LYS140 ASN141 ASP142 PHE143 THR144 PRO145 GLU146 GLU147 GLU148 GLU149 GLU150 VAL151 ARG152 ARG153 GLU154 ASN155 GLN156 TRP157 ALA158 PHE159 GLU160
Unit 2 SER8 PHE9 PRO10 GLU11 GLU12 VAL13 LEU14 GLU15 HIS16 VAL17 PHE18 SER19 PHE20 ILE21 GLN22 LEU23 ASP24 LYS25 ASP26 ARG27 ASN28 SER29 VAL30 SER31 LEU32 VAL33 CYS34 LYS35 SER36 TRP37 TYR38 GLU39 ILE40 GLU41 ARG42 TRP43 CYS44 ARG45 ARG46 LYS47 VAL48 PHE49 ILE50 GLY51 ASN52 CYS53 TYR54 ALA55 VAL56 SER57 PRO58 ALA59 THR60 VAL61 ILE62 ARG63 ARG64 PHE65 PRO66 LYS67 VAL68 ARG69 SER70 VAL71 GLU72 LEU73 LYS74 GLY75 LYS76 PRO77 HIS78 PHE79 ALA80 ASP81 PHE82 ASN83 LEU84 VAL85 PRO86 ASP87 GLY88 TRP89 GLY90 GLY91 TYR92 VAL93 TYR94 PRO95 TRP96 ILE97 GLU98 ALA99 MET100 SER101 SER102 SER103 TYR104 THR105 TRP106 LEU107 GLU108 GLU109 ILE110 ARG111 LEU112 LYS113 ARG114 MET115 VAL116 VAL117 THR118 ASP119 ASP120 CYS121 LEU122 GLU123 LEU124 ILE125 ALA126 LYS127 SER128 PHE129 LYS130 ASN131 PHE132 LYS133 VAL134 LEU135 VAL136 LEU137 SER138 SER139 CYS140 GLU141 GLY142 PHE143 SER144 THR145 ASP146 GLY147 LEU148 ALA149 ALA150 ILE151 ALA152 ALA153 THR154 CYS155 ARG156 ASN157 LEU158 LYS159 GLU160 LEU161 ASP162 LEU163 ARG164 GLU165 SER166 ASP167 VAL168 ASP169 ASP170 VAL171 SER172 GLY173 HIS174 TRP175 LEU176 SER177 HIS178 PHE179 PRO180 ASP181 THR182 TYR183 THR184 SER185 LEU186 VAL187 SER188 LEU189 ASN190 ILE191 SER192 CYS193 LEU194 ALA195 SER196 GLU197 VAL198 SER199 PHE200 SER201 ALA202 LEU203 GLU204 ARG205 LEU206 VAL207 THR208 ARG209 CYS210 PRO211 ASN212 LEU213 LYS214 SER215 LEU216 LYS217 LEU218 ASN219 ARG220 ALA221 VAL222 PRO223 LEU224 GLU225 LYS226 LEU227 ALA228 THR229 LEU230 LEU231 GLN232 ARG233 ALA234 PRO235 GLN236 LEU237 GLU238 GLU239 LEU240 GLY241 THR242 GLY243 GLY244 TYR245 THR246 ALA247 GLU248 VAL249 ARG250 PRO251 ASP252 VAL253 TYR254 SER255 GLY256 LEU257 SER258 VAL259 ALA260 LEU261 SER262 GLY263 CYS264 LYS265 GLU266 LEU267 ARG268 CYS269 LEU270 SER271 GLY272 PHE273 TRP274 ASP275 ALA276 VAL277 PRO278 ALA279 TYR280 LEU281 PRO282 ALA283 VAL284 TYR285 SER286 VAL287 CYS288 SER289 ARG290 LEU291 THR292 THR293 LEU294 ASN295 LEU296 SER297 TYR298 ALA299 THR300 VAL301 GLN302 SER303 TYR304 ASP305 LEU306 VAL307 LYS308 LEU309 LEU310 CYS311 GLN312 CYS313 PRO314 LYS315 LEU316 GLN317 ARG318 LEU319 TRP320 VAL321 LEU322 ASP323 TYR324 ILE325 GLU326 ASP327 ALA328 GLY329 LEU330 GLU331 VAL332 LEU333 ALA334 SER335 THR336 CYS337 LYS338 ASP339 LEU340 ARG341 GLU342 LEU343 ARG344 VAL345 PHE346 PRO347 SER348 GLU349 PRO350 PHE351 VAL352 MET353 GLU354 PRO355 ASN356 VAL357 ALA358 LEU359 THR360 GLU361 GLN362 GLY363 LEU364 VAL365 SER366 VAL367 SER368 MET369 GLY370 CYS371 PRO372 LYS373 LEU374 GLU375 SER376 VAL377 LEU378 TYR379 PHE380 CYS381 ARG382 GLN383 MET384 THR385 ASN386 ALA387 ALA388 LEU389 ILE390 THR391 ILE392 ALA393 ARG394 ASN395 ARG396 PRO397 ASN398 MET399 THR400 ARG401 PHE402 ARG403 LEU404 CYS405 ILE406 ILE407 GLU408 PRO409 LYS410 ALA411 PRO412 ASP413 TYR414 LEU415 THR416 LEU417 GLU418 PRO419 LEU420 ASP421 ILE422 GLY423 PHE424 GLY425 ALA426 ILE427 VAL428 GLU429 HIS430 CYS431 LYS432 ASP433 LEU434 ARG435 ARG436 LEU437 SER438 LEU439 SER440 GLY441 LEU442 LEU443 THR444 ASP445 LYS446 VAL447 PHE448 GLU449 TYR450 ILE451 GLY452 THR453 TYR454 ALA455 LYS456 LYS457 MET458 GLU459 MET460 LEU461 SER462 VAL463 ALA464 PHE465 ALA466 GLY467 ASP468 SER469 ASP470 LEU471 GLY472 MET473 HIS474 HIS475 VAL476 LEU477 SER478 GLY479 CYS480 ASP481 SER482 LEU483 ARG484 LYS485 LEU486 GLU487 ILE488 ARG489 ASP490 CYS491 PRO492 PHE493 GLY494 ASP495 LYS496 ALA497 LEU498 LEU499 ALA500 ASN501 ALA502 SER503 LYS504 LEU505 GLU506 THR507 MET508 ARG509 SER510 LEU511 TRP512 MET513 SER514 SER515 CYS516 SER517 VAL518 SER519 PHE520 GLY521 ALA522 CYS523 LYS524 LEU525 LEU526 GLY527 GLN528 LYS529 MET530 PRO531 LYS532 LEU533 ASN534 VAL535 GLU536 VAL537 ILE538 ASP539 GLU540 ARG541 GLY542 ALA543 PRO544 ASP545 SER546 ARG547 PRO548 GLU549 SER550 CYS551 PRO552 VAL553 GLU554 ARG555 VAL556 PHE557 ILE558 TYR559 ARG560 THR561 VAL562 ALA563 GLY564 PRO565 ARG566 PHE567 ASP568 MET569 PRO570 GLY571 PHE572 VAL573 TRP574 ASN575 MET576 ASP577 GLN578
Unit 3 GLN1 VAL2 VAL3 GLY4 TRP5 PRO6 PRO7 VAL8 ARG9 ASN10 TYR11 ARG12 LYS13

Ligands
Unit 4 IHP701 NLA801

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany