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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A JUNCTIONLESS ALL-RNA HAIRPIN RIBOZYME ANGSTROMS RESOLUTION
Keywords RNA, HAIRPIN RIBOZYME, ALL-RNA, MUTATION, LOW SALT, S-TURN, RIBOSE ZIPPER, CATALYTIC RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2OUE     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 32 613 35
2  RNA    B 12 264 0
3  RNA    C 32 613 35
4  RNA    D 19 395 0
5  RNA    A 32 613 35
6  Ligand   LOOP A RIBOZYME STRAND  B 1 0 7
7  RNA    D 32 613 35
8 Water     84 0 84
total       244 3111 231

Nucleic acids
Unit 1 U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 G15 G16 C17 A18 G19 A20 G21 A22 A23 A24 C25 A26 C27 A28 C29 G30 A31 NCO101 SO4201
Unit 2 C2 G3 G4 U5 G6 A7 G8 A9 A10 G11 G12 G13
Unit 3 U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 G15 G16 C17 A18 G19 A20 G21 A22 A23 A24 C25 A26 C27 A28 C29 G30 A31 NCO101 SO4201
Unit 4 U31 C32 G33 U34 G35 G36 U37 A38 C39 A40 U41 U42 A43 C44 C45 U46 G47 C48 C49
Unit 5 U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 G15 G16 C17 A18 G19 A20 G21 A22 A23 A24 C25 A26 C27 A28 C29 G30 A31 NCO101 SO4201
Unit 7 U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 G15 G16 C17 A18 G19 A20 G21 A22 A23 A24 C25 A26 C27 A28 C29 G30 A31 NCO101 SO4201

Ligands
Unit 6 NCO101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany