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Sequence, Chains, Asymmetric and Biological Units

Title L1 RIBOZYME LIGASE CIRCULAR ADDUCT
Keywords LIGASE, RIBOZYME, IN VITRO SELECTION, RNA, ACTIVE SITE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2OIU     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    P 71 1527 0
2  RNA    Q 71 1527 0
3  Ligand   L1 RIBOZYME RNA LIGASE  Q 7 0 7
4 Water     26 0 26
total       175 3054 33

Nucleic acids
Unit 1 G1 G2 A3 C4 C5 U6 C7 G8 G9 C10 G11 A12 A13 A14 G15 C16 C17 G18 U19 U20 C21 G22 A23 C24 C25 A26 G27 C28 G29 A30 A31 A32 G33 C34 U35 C36 U37 U38 A39 G40 A41 C42 A43 G44 G45 A46 G47 G48 U49 U50 A51 G52 G53 U54 G55 C56 U57 C58 C59 G60 A61 A62 A63 G64 G65 A66 G67 C68 A69 C70 U71
Unit 2 G1 G2 A3 C4 C5 U6 C7 G8 G9 C10 G11 A12 A13 A14 G15 C16 C17 G18 U19 U20 C21 G22 A23 C24 C25 A26 G27 C28 G29 A30 A31 A32 G33 C34 U35 C36 U37 U38 A39 G40 A41 C42 A43 G44 G45 A46 G47 G48 U49 U50 A51 G52 G53 U54 G55 C56 U57 C58 C59 G60 A61 A62 A63 G64 G65 A66 G67 C68 A69 C70 U71

Ligands
Unit 3 MG72 MG73 MG74 MG75 MG76 MG77 MG78

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany