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Sequence, Chains, Asymmetric and Biological Units

Title FULL-LENGTH HAMMERHEAD RIBOZYME WITH MN(II) BOUND
Keywords RIBOZYME, HAMMERHEAD RNA, STEM-LOOP INTERACTION, URIDINE TURN, A-FORM HELIX, MANGANESE, MN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2OEU     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 43 898 32
2  RNA    B 20 377 42
3  Ligand   HAMMERHEAD RIBOZYME  A 5 0 5
4 Water     195 0 195
total       263 1275 274

Nucleic acids
Unit 1 GTP1 G2 A3 U4 G5 U6 A7 C8 U9 A10 C11 C12 A13 G14 C15 U16 G17 A18 U19 G20 A21 G22 U23 C24 C25 C26 A27 A28 A29 U30 A31 G32 G33 A34 C35 G36 A37 A38 A39 C40 G41 C42 C43
Unit 2 G1 G2 C3 G4 U5 OMC6 C7 U8 G9 G10 5BU11 A12 U13 C14 C15 A16 A17 U18 C19 DC20

Ligands
Unit 3 MN301 MN401 MN501 MN601 MN701

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany