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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF L-ASPARAGINASE I FROM VIBRIO CHOLERAE O ELTOR STR. N16961
Keywords L-ASPARAGINASE I, SAD, MCSG, PSI-2, STRUCTURAL GENOMICS, PRO STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMIC HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2OCD     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-ASPARAGINASE I  A 328 2387 120
2  Protein   L-ASPARAGINASE I  B 333 2422 120
3  Protein   L-ASPARAGINASE I  C 328 2386 120
4  Protein   L-ASPARAGINASE I  D 332 2414 120
5  Ligand   L-ASPARAGINASE I  A 1 0 4
6  Ligand   L-ASPARAGINASE I  B 2 0 8
7  Ligand   L-ASPARAGINASE I  C 1 0 4
8  Ligand   L-ASPARAGINASE I  D 1 0 6
9 Water     524 0 524
total       1850 9609 1026
Proteins
Unit 1 ALA2 ARG3 LYS4 HIS5 ILE6 TYR7 ILE8 ALA9 TYR10 THR11 GLY12 GLY13 THR14 ILE15 GLY16 MSE17 LYS18 LYS19 SER20 ASP21 PRO26 VAL27 ALA28 GLY29 PHE30 MSE31 GLU32 LYS33 GLN34 LEU35 ALA36 SER37 MSE38 PRO39 GLU40 PHE41 HIS42 ARG43 PRO44 GLU45 MSE46 PRO47 LEU48 PHE49 THR50 ILE51 HIS52 GLU53 TYR54 ASP55 PRO56 LEU57 MSE58 ASP59 SER60 SER61 ASP62 MSE63 THR64 PRO65 ALA66 ASP67 TRP68 GLN69 LEU70 ILE71 ALA72 ASP73 ASP74 ILE75 ALA76 ALA77 ASN78 TYR79 ASP80 LYS81 TYR82 ASP83 GLY84 PHE85 VAL86 ILE87 LEU88 HIS89 GLY90 THR91 ASP92 THR93 MSE94 ALA95 TYR96 THR97 ALA98 SER99 ALA100 LEU101 SER102 PHE103 MSE104 PHE105 GLU106 ASN107 LEU108 GLY109 LYS110 PRO111 VAL112 ILE113 VAL114 THR115 GLY116 SER117 GLN118 ILE119 PRO120 LEU121 ALA122 ASP123 LEU124 ARG125 SER126 ASP127 GLY128 GLN129 ALA130 ASN131 LEU132 LEU133 ASN134 ALA135 LEU136 HIS137 VAL138 ALA139 ALA140 ASN141 TYR142 PRO143 ILE144 ASN145 GLU146 VAL147 THR148 LEU149 PHE150 PHE151 ASN152 ASN153 ARG154 LEU155 MSE156 ARG157 GLY158 ASN159 ARG160 SER161 ARG162 LYS163 SER164 HIS165 ALA166 ASP167 GLY168 PHE169 SER170 ALA171 PHE172 SER173 SER174 PRO175 ASN176 LEU177 PRO178 PRO179 LEU180 LEU181 GLU182 ALA183 GLY184 ILE185 ASN186 ILE187 GLU188 LEU189 SER190 THR191 ASN192 VAL193 LYS194 VAL195 ASP196 GLU197 LYS198 PRO199 SER200 GLY201 GLU202 PHE203 LYS204 VAL205 ASN206 PRO207 ILE208 THR209 PRO210 GLN211 PRO212 ILE213 GLY214 VAL215 ILE216 THR217 MSE218 TYR219 PRO220 GLY221 ILE222 SER223 HIS224 GLU225 VAL226 ILE227 ARG228 ASN229 THR230 LEU231 LEU232 GLN233 PRO234 VAL235 ASN236 ALA237 MSE238 ILE239 LEU240 LEU241 THR242 PHE243 GLY244 VAL245 GLY246 ASN247 ALA248 PRO249 GLN250 ASN251 PRO252 GLU253 LEU254 LEU255 ALA256 GLN257 LEU258 LYS259 ALA260 ALA261 SER262 GLU263 ARG264 GLY265 VAL266 ILE267 VAL268 VAL269 ASN270 LEU271 THR272 GLN273 CYS274 LEU275 ALA276 GLY277 LYS278 VAL279 ASN280 MSE281 GLY282 GLY287 CYS288 ALA289 LEU290 ALA291 ASP292 ALA293 GLY294 VAL295 ILE296 SER297 GLY298 TYR299 ASP300 MSE301 THR302 PRO303 GLU304 ALA305 ALA306 LEU307 ALA308 LYS309 LEU310 HIS311 TYR312 LEU313 LEU314 SER315 GLN316 ASN317 LEU318 SER319 TYR320 GLU321 GLU322 VAL323 LYS324 ALA325 LYS326 MSE327 GLN328 GLN329 VAL330 LEU331 ARG332 GLY333 GLU334 MSE335 THR336 LEU337
Unit 2 ALA2 ARG3 LYS4 HIS5 ILE6 TYR7 ILE8 ALA9 TYR10 THR11 GLY12 GLY13 THR14 ILE15 GLY16 MSE17 LYS18 LYS19 SER20 ASP21 VAL25 PRO26 VAL27 ALA28 GLY29 PHE30 MSE31 GLU32 LYS33 GLN34 LEU35 ALA36 SER37 MSE38 PRO39 GLU40 PHE41 HIS42 ARG43 PRO44 GLU45 MSE46 PRO47 LEU48 PHE49 THR50 ILE51 HIS52 GLU53 TYR54 ASP55 PRO56 LEU57 MSE58 ASP59 SER60 SER61 ASP62 MSE63 THR64 PRO65 ALA66 ASP67 TRP68 GLN69 LEU70 ILE71 ALA72 ASP73 ASP74 ILE75 ALA76 ALA77 ASN78 TYR79 ASP80 LYS81 TYR82 ASP83 GLY84 PHE85 VAL86 ILE87 LEU88 HIS89 GLY90 THR91 ASP92 THR93 MSE94 ALA95 TYR96 THR97 ALA98 SER99 ALA100 LEU101 SER102 PHE103 MSE104 PHE105 GLU106 ASN107 LEU108 GLY109 LYS110 PRO111 VAL112 ILE113 VAL114 THR115 GLY116 SER117 GLN118 ILE119 PRO120 LEU121 ALA122 ASP123 LEU124 ARG125 SER126 ASP127 GLY128 GLN129 ALA130 ASN131 LEU132 LEU133 ASN134 ALA135 LEU136 HIS137 VAL138 ALA139 ALA140 ASN141 TYR142 PRO143 ILE144 ASN145 GLU146 VAL147 THR148 LEU149 PHE150 PHE151 ASN152 ASN153 ARG154 LEU155 MSE156 ARG157 GLY158 ASN159 ARG160 SER161 ARG162 LYS163 SER164 HIS165 ALA166 ASP167 GLY168 PHE169 SER170 ALA171 PHE172 SER173 SER174 PRO175 ASN176 LEU177 PRO178 PRO179 LEU180 LEU181 GLU182 ALA183 GLY184 ILE185 ASN186 ILE187 GLU188 LEU189 SER190 THR191 ASN192 VAL193 LYS194 VAL195 ASP196 GLU197 LYS198 PRO199 SER200 GLY201 GLU202 PHE203 LYS204 VAL205 ASN206 PRO207 ILE208 THR209 PRO210 GLN211 PRO212 ILE213 GLY214 VAL215 ILE216 THR217 MSE218 TYR219 PRO220 GLY221 ILE222 SER223 HIS224 GLU225 VAL226 ILE227 ARG228 ASN229 THR230 LEU231 LEU232 GLN233 PRO234 VAL235 ASN236 ALA237 MSE238 ILE239 LEU240 LEU241 THR242 PHE243 GLY244 VAL245 GLY246 ASN247 ALA248 PRO249 GLN250 ASN251 PRO252 GLU253 LEU254 LEU255 ALA256 GLN257 LEU258 LYS259 ALA260 ALA261 SER262 GLU263 ARG264 GLY265 VAL266 ILE267 VAL268 VAL269 ASN270 LEU271 THR272 GLN273 CYS274 LEU275 ALA276 GLY277 LYS278 VAL279 ASN280 MSE281 GLY282 GLY283 TYR284 ALA285 THR286 GLY287 CYS288 ALA289 LEU290 ALA291 ASP292 ALA293 GLY294 VAL295 ILE296 SER297 GLY298 TYR299 ASP300 MSE301 THR302 PRO303 GLU304 ALA305 ALA306 LEU307 ALA308 LYS309 LEU310 HIS311 TYR312 LEU313 LEU314 SER315 GLN316 ASN317 LEU318 SER319 TYR320 GLU321 GLU322 VAL323 LYS324 ALA325 LYS326 MSE327 GLN328 GLN329 VAL330 LEU331 ARG332 GLY333 GLU334 MSE335 THR336 LEU337
Unit 3 ALA2 ARG3 LYS4 HIS5 ILE6 TYR7 ILE8 ALA9 TYR10 THR11 GLY12 GLY13 THR14 ILE15 GLY16 MSE17 LYS18 LYS19 SER20 ASP21 VAL25 PRO26 VAL27 ALA28 GLY29 PHE30 MSE31 GLU32 LYS33 GLN34 LEU35 ALA36 SER37 MSE38 PRO39 GLU40 PHE41 HIS42 ARG43 PRO44 GLU45 MSE46 PRO47 LEU48 PHE49 THR50 ILE51 HIS52 GLU53 TYR54 ASP55 PRO56 LEU57 MSE58 ASP59 SER60 SER61 ASP62 MSE63 THR64 PRO65 ALA66 ASP67 TRP68 GLN69 LEU70 ILE71 ALA72 ASP73 ASP74 ILE75 ALA76 ALA77 ASN78 TYR79 ASP80 LYS81 TYR82 ASP83 GLY84 PHE85 VAL86 ILE87 LEU88 HIS89 GLY90 THR91 ASP92 THR93 MSE94 ALA95 TYR96 THR97 ALA98 SER99 ALA100 LEU101 SER102 PHE103 MSE104 PHE105 GLU106 ASN107 LEU108 GLY109 LYS110 PRO111 VAL112 ILE113 VAL114 THR115 GLY116 SER117 GLN118 ILE119 PRO120 LEU121 ALA122 ASP123 LEU124 ARG125 SER126 ASP127 GLY128 GLN129 ALA130 ASN131 LEU132 LEU133 ASN134 ALA135 LEU136 HIS137 VAL138 ALA139 ALA140 ASN141 TYR142 PRO143 ILE144 ASN145 GLU146 VAL147 THR148 LEU149 PHE150 PHE151 ASN152 ASN153 ARG154 LEU155 MSE156 ARG157 GLY158 ASN159 ARG160 SER161 ARG162 LYS163 SER164 HIS165 ALA166 GLY168 PHE169 SER170 ALA171 PHE172 SER173 SER174 PRO175 ASN176 LEU177 PRO178 PRO179 LEU180 LEU181 GLU182 ALA183 GLY184 ILE185 ASN186 ILE187 GLU188 LEU189 SER190 THR191 ASN192 VAL193 LYS194 VAL195 ASP196 GLU197 LYS198 PRO199 SER200 GLY201 GLU202 PHE203 LYS204 VAL205 ASN206 PRO207 ILE208 THR209 PRO210 GLN211 PRO212 ILE213 GLY214 VAL215 ILE216 THR217 MSE218 TYR219 PRO220 GLY221 ILE222 SER223 HIS224 GLU225 VAL226 ILE227 ARG228 ASN229 THR230 LEU231 LEU232 GLN233 PRO234 VAL235 ASN236 ALA237 MSE238 ILE239 LEU240 LEU241 THR242 PHE243 GLY244 VAL245 GLY246 ASN247 ALA248 PRO249 GLN250 ASN251 PRO252 GLU253 LEU254 LEU255 ALA256 GLN257 LEU258 LYS259 ALA260 ALA261 SER262 GLU263 ARG264 GLY265 VAL266 ILE267 VAL268 VAL269 ASN270 LEU271 THR272 GLN273 CYS274 LEU275 ALA276 GLY277 LYS278 VAL279 ASN280 MSE281 GLY282 GLY287 CYS288 ALA289 LEU290 ALA291 ASP292 ALA293 GLY294 VAL295 ILE296 SER297 GLY298 TYR299 ASP300 MSE301 THR302 PRO303 GLU304 ALA305 ALA306 LEU307 ALA308 LYS309 LEU310 HIS311 TYR312 LEU313 LEU314 SER315 GLN316 ASN317 LEU318 SER319 TYR320 GLU321 GLU322 VAL323 LYS324 ALA325 LYS326 MSE327 GLN328 GLN329 VAL330 LEU331 ARG332 GLY333 GLU334 MSE335 THR336 LEU337
Unit 4 ALA2 ARG3 LYS4 HIS5 ILE6 TYR7 ILE8 ALA9 TYR10 THR11 GLY12 GLY13 THR14 ILE15 GLY16 MSE17 LYS18 LYS19 SER20 VAL25 PRO26 VAL27 ALA28 GLY29 PHE30 MSE31 GLU32 LYS33 GLN34 LEU35 ALA36 SER37 MSE38 PRO39 GLU40 PHE41 HIS42 ARG43 PRO44 GLU45 MSE46 PRO47 LEU48 PHE49 THR50 ILE51 HIS52 GLU53 TYR54 ASP55 PRO56 LEU57 MSE58 ASP59 SER60 SER61 ASP62 MSE63 THR64 PRO65 ALA66 ASP67 TRP68 GLN69 LEU70 ILE71 ALA72 ASP73 ASP74 ILE75 ALA76 ALA77 ASN78 TYR79 ASP80 LYS81 TYR82 ASP83 GLY84 PHE85 VAL86 ILE87 LEU88 HIS89 GLY90 THR91 ASP92 THR93 MSE94 ALA95 TYR96 THR97 ALA98 SER99 ALA100 LEU101 SER102 PHE103 MSE104 PHE105 GLU106 ASN107 LEU108 GLY109 LYS110 PRO111 VAL112 ILE113 VAL114 THR115 GLY116 SER117 GLN118 ILE119 PRO120 LEU121 ALA122 ASP123 LEU124 ARG125 SER126 ASP127 GLY128 GLN129 ALA130 ASN131 LEU132 LEU133 ASN134 ALA135 LEU136 HIS137 VAL138 ALA139 ALA140 ASN141 TYR142 PRO143 ILE144 ASN145 GLU146 VAL147 THR148 LEU149 PHE150 PHE151 ASN152 ASN153 ARG154 LEU155 MSE156 ARG157 GLY158 ASN159 ARG160 SER161 ARG162 LYS163 SER164 HIS165 ALA166 ASP167 GLY168 PHE169 SER170 ALA171 PHE172 SER173 SER174 PRO175 ASN176 LEU177 PRO178 PRO179 LEU180 LEU181 GLU182 ALA183 GLY184 ILE185 ASN186 ILE187 GLU188 LEU189 SER190 THR191 ASN192 VAL193 LYS194 VAL195 ASP196 GLU197 LYS198 PRO199 SER200 GLY201 GLU202 PHE203 LYS204 VAL205 ASN206 PRO207 ILE208 THR209 PRO210 GLN211 PRO212 ILE213 GLY214 VAL215 ILE216 THR217 MSE218 TYR219 PRO220 GLY221 ILE222 SER223 HIS224 GLU225 VAL226 ILE227 ARG228 ASN229 THR230 LEU231 LEU232 GLN233 PRO234 VAL235 ASN236 ALA237 MSE238 ILE239 LEU240 LEU241 THR242 PHE243 GLY244 VAL245 GLY246 ASN247 ALA248 PRO249 GLN250 ASN251 PRO252 GLU253 LEU254 LEU255 ALA256 GLN257 LEU258 LYS259 ALA260 ALA261 SER262 GLU263 ARG264 GLY265 VAL266 ILE267 VAL268 VAL269 ASN270 LEU271 THR272 GLN273 CYS274 LEU275 ALA276 GLY277 LYS278 VAL279 ASN280 MSE281 GLY282 GLY283 TYR284 ALA285 THR286 GLY287 CYS288 ALA289 LEU290 ALA291 ASP292 ALA293 GLY294 VAL295 ILE296 SER297 GLY298 TYR299 ASP300 MSE301 THR302 PRO303 GLU304 ALA305 ALA306 LEU307 ALA308 LYS309 LEU310 HIS311 TYR312 LEU313 LEU314 SER315 GLN316 ASN317 LEU318 SER319 TYR320 GLU321 GLU322 VAL323 LYS324 ALA325 LYS326 MSE327 GLN328 GLN329 VAL330 LEU331 ARG332 GLY333 GLU334 MSE335 THR336 LEU337
Ligands
Unit 5 ACT601
Unit 6 ACT602 ACT603
Unit 7 ACT604
Unit 8 GOL605
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany