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Title | DUPLEX DNA CONTAINING AN ABASIC SITE WITH AN OPPOSITE DC (ALPHA ANOMER) IN 5'-G_AC-3' (10 STRUCTURE ENSEMBLE AND AVERAGED STRUCTURE) | |
Keywords | DNA DAMAGE, APE1, ABASIC, NMR, AMBER, MOLECULAR DYNAMICS | |
Experiment | NMR | |
Number of Models | 11 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2O80 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | 5'-D(*CP*CP*AP*AP*AP*GP*(ORP)P*AP*CP*CP*GP*GP*G)- 3' | A | 13 | 379 | 20 |
2 | Other macromolecule | 5'-D(*CP*CP*CP*GP*GP*TP*CP*CP*TP*TP*TP*GP*G)-3' | B | 13 | 409 | 0 |
total | 26 | 788 | 20 |
Unit 1 | DC1 DC2 DA3 DA4 DA5 DG6 ORP7 DA8 DC9 DC10 DG11 DG12 DG13 |
Unit 2 | DC14 DC15 DC16 DG17 DG18 DT19 DC20 DC21 DT22 DT23 DT24 DG25 DG26 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |